RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TGDSO95455 350 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 ZFYP08048 801 aaPredicted RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 HSP90AB1P08238 724 aaKnown RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 FAM58BPP0C7Q3 252 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 HAPLN1P10915 354 aaPredicted RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 DGKAP23743 735 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 CUL3Q13618 768 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 CA9Q16790 459 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 KRTAP27-1Q3LI81 207 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 ZRANB3Q5FWF4 1079 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 FAM76BQ5HYJ3 339 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 FAM91A1Q658Y4 838 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 C11orf57Q6ZUT1 292 aaPredicted RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 ANO5Q75V66 913 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 ZNF611Q8N823 705 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 BMPERQ8N8U9 685 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 OLIG1Q8TAK6 271 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 ZNF473Q8WTR7 871 aaKnown RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 IRGQQ8WZA9 623 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 STAMBPL1Q96FJ0 436 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 SPATA33Q96N06 139 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 ZNF583Q96ND8 569 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 PKP4Q99569 1192 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 GPATCH1Q9BRR8 931 aaKnown RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 TRAF4Q9BUZ4 470 aaPredicted RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 CDH20Q9HBT6 801 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 ZFP37Q9Y6Q3 630 aaPredicted RBP4.73□□□□□ -1.65
LSM5-209ENST00000468872 TSPOAP1O95153 1857 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 PTPRTO14522 1441 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 CYSRT1A8MQ03 144 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 FAM86B1E9PN63 330 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 PSMD14O00487 310 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 CAPN9O14815 690 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 GRID2O43424 1007 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 SLU7O95391 586 aaKnown RBP4.72□□□□□ -1.65
LSM5-209ENST00000468872 FAM86B2P0C5J1 330 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 MSH3P20585 1137 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 PSMA3P25788 255 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 NAGLUP54802 743 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 SCN1BQ07699 218 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 ITGA7Q13683 1181 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 PHLDA2Q53GA4 152 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 ELFN2Q5R3F8 820 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 PDSS1Q5T2R2 415 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 CORO6Q6QEF8 472 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 GSG1LQ6UXU4 331 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 FOXL2NBQ6ZUU3 175 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 POC1AQ8NBT0 407 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 OR2T12Q8NG77 320 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 CCDC107Q8WV48 283 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 NSMAFQ92636 917 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 VMP1Q96GC9 406 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 ERO1AQ96HE7 468 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 MYADMQ96S97 322 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 RAD9AQ99638 391 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 FN3KQ9H479 309 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 XAB2Q9HCS7 855 aaKnown RBP4.72□□□□□ -1.65
LSM5-209ENST00000468872 DNAJC4Q9NNZ3 241 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 A4GALTQ9NPC4 353 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 SNX7Q9UNH6 387 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 KCNK7Q9Y2U2 307 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 SETBP1Q9Y6X0 1596 aa4.72□□□□□ -1.65
LSM5-209ENST00000468872 CEP350Q5VT06 3117 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 C16orf97H3BN30 126 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 RNASEH1O60930 286 aaKnown RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 PLA2G4BP0C869 781 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 SAGP10523 405 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 HSPA8P11142 646 aaKnown RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 EPCAMP16422 314 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 GNAZP19086 355 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 JAK1P23458 1154 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 ACAT1P24752 427 aaKnown RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 COPB2P35606 906 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 KRT2P35908 639 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 HOXA1P49639 335 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 B3GALT5-AS1P59052 145 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 TUBB4BP68371 445 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 PTK6Q13882 451 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 VEZF1Q14119 521 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 ZNF718Q3SXZ3 478 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 MCMDC2Q4G0Z9 681 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 LBHQ53QV2 105 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 SPDYCQ5MJ68 293 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 C11orf63Q6NUN7 778 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 MOXD1Q6UVY6 613 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 SPATA21Q7Z572 469 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 FOXP4Q8IVH2 680 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 SIX6OS1Q8N1H7 587 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 THAP8Q8NA92 274 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 C9orf43Q8TAL5 461 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 GRAPLQ8TC17 118 aaPredicted RBP4.71□□□□□ -1.66
LSM5-209ENST00000468872 GRHL3Q8TE85 626 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 CCDC114Q96M63 670 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 RTP3Q9BQQ7 232 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 S1PR5Q9H228 398 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 RETREG1Q9H6L5 497 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 GKN1Q9NS71 199 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms