RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 RAD51AP1Q96B01 352 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 WBP1Q96G27 269 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 CFAP36Q96G28 342 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 TCTN2Q96GX1 697 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 NAT9Q9BTE0 207 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 SYTL2Q9HCH5 934 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 LHX9Q9NQ69 397 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 CHMP2BQ9UQN3 213 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 MED16Q9Y2X0 877 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 ATMQ13315 3056 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 SMAPO00193 183 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 TP73O15350 636 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 HCRTR1O43613 425 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 CPNE3O75131 537 aaKnown RBP14.29□□□□□ -0.12
LIMS4-201ENST00000413601 ITGB2P05107 769 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 MSL3P1P0C860 447 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 PRKAR1AP10644 381 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 TCN2P20062 427 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 RPL21P46778 160 aaKnown RBP14.29□□□□□ -0.12
LIMS4-201ENST00000413601 CUL1Q13616 776 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 TBR1Q16650 682 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 HIF1AQ16665 826 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 DEFB110Q30KQ9 67 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 C2CD4AQ8NCU7 369 aaPredicted RBP14.29□□□□□ -0.12
LIMS4-201ENST00000413601 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 GIMAP7Q8NHV1 300 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 CT55Q8WUE5 264 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 STARD8Q92502 1023 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 GPR21Q99679 349 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 WDR83Q9BRX9 315 aaKnown RBP14.29□□□□□ -0.12
LIMS4-201ENST00000413601 RAB11FIP5Q9BXF6 653 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 PLAC1Q9HBJ0 212 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 ZC3H7BQ9UGR2 993 aaKnown RBP14.29□□□□□ -0.12
LIMS4-201ENST00000413601 SERTAD3Q9UJW9 196 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 KLHL20Q9Y2M5 609 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 MRFAP1Q9Y605 127 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 TEX264Q9Y6I9 313 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 HEATR5BQ9P2D3 2071 aa14.29□□□□□ -0.12
LIMS4-201ENST00000413601 TERTO14746 1132 aaKnown RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 KATNA1O75449 491 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 CYP2A7P20853 494 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 MAGP20916 626 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 CCNFP41002 786 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 CARSP49589 748 aaKnown RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 ITGA1P56199 1179 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 ARL4CP56559 192 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 C2orf54Q08AI8 447 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 GPS2Q13227 327 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 DNASE1L3Q13609 305 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 TTLL9Q3SXZ7 439 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 C16orf46Q6P387 395 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 ANKMY2Q8IV38 441 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 EXD3Q8N9H8 876 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 GABPB2Q8TAK5 448 aaPredicted RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 MAGEC3Q8TD91 643 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 DENND1AQ8TEH3 1009 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 N4BP2L2Q92802 583 aaPredicted RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 KCNJ9Q92806 393 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 SLC22A18Q96BI1 424 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 CLIP3Q96DZ5 547 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 CERS2Q96G23 380 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 ARHGAP9Q9BRR9 750 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 AARSD1Q9BTE6 412 aaKnown RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 SEMA4CQ9C0C4 833 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 ACTR5Q9H9F9 607 aaPredicted RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 PPANQ9NQ55 473 aaKnown RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.28□□□□□ -0.12
LIMS4-201ENST00000413601 SLC17A6Q9P2U8 582 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 DHRS7Q9Y394 339 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 PCDHB3Q9Y5E6 796 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 COMMD10Q9Y6G5 202 aa14.28□□□□□ -0.12
LIMS4-201ENST00000413601 MDC1Q14676 2089 aaKnown RBP14.27□□□□□ -0.12
LIMS4-201ENST00000413601 ARHGEF33A8MVX0 844 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 PRICKLE3O43900 615 aaPredicted RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 PSIP1O75475 530 aaKnown RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 C1QL1O75973 258 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 PSMB5P28074 263 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 GABRB3P28472 473 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 OAS2P29728 719 aaKnown RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 GABRA4P48169 554 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 CDC20Q12834 499 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 PDIA2Q13087 525 aaKnown RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 ATP1A1-AS1Q5TC04 95 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 LCN10Q6JVE6 187 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 TRMT10BQ6PF06 316 aaKnown RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 NEK10Q6ZWH5 1172 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 DNAJC22Q8N4W6 341 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 RAB42Q8N4Z0 105 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 CD200R1Q8TD46 325 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 INPP5DQ92835 1189 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 MR1Q95460 341 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 LRRC39Q96DD0 335 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 NDNQ99608 321 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 CHRNA10Q9GZZ6 450 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 SPRTNQ9H040 489 aaPredicted RBP14.27□□□□□ -0.13
LIMS4-201ENST00000413601 DPH5Q9H2P9 285 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms