RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SPATA7Q9P0W8 599 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 FBXO4Q9UKT5 387 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 APOBEC2Q9Y235 224 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 DNAJC15Q9Y5T4 150 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 PRR33A8MZF0 331 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 E7ENX8 843 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 SCAMP1O15126 338 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 DCTN3O75935 186 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 EBLN1P0CF75 366 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 UROSP10746 265 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 MTHFD1P11586 935 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 ACTR1BP42025 376 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 CCNG1P51959 295 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 PNLIPRP1P54315 467 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 ACTR1AP61163 376 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 TAP2Q03519 686 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 BTKQ06187 659 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 ILF3Q12906 894 aaKnown RBP eCLIP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 NAE1Q13564 534 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 E2F2Q14209 437 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 RPE65Q16518 533 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 CYP2A13Q16696 494 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 SLC9B1Q4ZJI4 515 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 LPCAT2Q7L5N7 544 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 THOC6Q86W42 341 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 PHACTR4Q8IZ21 702 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 GAB3Q8WWW8 586 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 PYCR2Q96C36 320 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 GSDMCQ9BYG8 508 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 NUF2Q9BZD4 464 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 TCEAL2Q9H3H9 227 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 TRPS1Q9UHF7 1281 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 POLG2Q9UHN1 485 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 SLC22A14Q9Y267 594 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 ANGPTL3Q9Y5C1 460 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 HEBP2Q9Y5Z4 205 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 CFAP20Q9Y6A4 193 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 ZNF318Q5VUA4 2279 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 MUC6Q6W4X9 2439 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 CCT8L1PA6NM43 557 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 PDZK1P1A8MUH7 402 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 SDHDO14521 159 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 GIPC1O14908 333 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 VILLO15195 856 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 OR4F21O95013 312 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 EML2O95834 649 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 CSF2P04141 144 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 F3P13726 295 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 NME1P15531 152 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 HALP42357 657 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 GGTA1PQ4G0N0 100 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 PMS2CLQ68D20 193 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 DUS1LQ6P1R4 473 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 RNF165Q6ZSG1 346 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 TRPM8Q7Z2W7 1104 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 EFL1Q7Z2Z2 1120 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 BMP8AQ7Z5Y6 402 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 DTWD2Q8NBA8 298 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 OR4F6Q8NGB9 312 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 OR4K3Q96R72 315 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 KCNA7Q96RP8 456 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 HEY2Q9UBP5 337 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 CIDEBQ9UHD4 219 aa18.9■□□□□ 0.62
PDLIM2-205ENST00000397761 UGDHO60701 494 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 DIAPH2O60879 1101 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 ITPKAP23677 461 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 SERPINB3P29508 390 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 NXPH1P58417 271 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 TBPL1P62380 186 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 PDCD2Q16342 344 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 CAPN13Q6MZZ7 669 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 SLC30A9Q6PML9 568 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 MILR1Q7Z6M3 343 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 SYTL1Q8IYJ3 562 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 FITM2Q8N6M3 262 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 L3MBTL4Q8NA19 623 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 HMGCLL1Q8TB92 370 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 TWIST2Q8WVJ9 160 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 CAMK1GQ96NX5 476 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 CDK15Q96Q40 435 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 CCDC28BQ9BUN5 200 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 MIR1-1HGQ9H1L0 117 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 MYLK2Q9H1R3 596 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 TUBB1Q9H4B7 451 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 ABCF3Q9NUQ8 709 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 IMP3Q9NV31 184 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 GPRC5BQ9NZH0 403 aa18.89■□□□□ 0.61
PDLIM2-205ENST00000397761 OR52A4PA6NMU1 304 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 BCAT2O15382 392 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 PRAMEF4O60810 478 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 WFS1O76024 890 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 CCND1P24385 295 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 NDUFS1P28331 727 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 CASP2P42575 452 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 CSTF1Q05048 431 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 PRAMEF9Q5VWM5 478 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 METTL21CQ5VZV1 264 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 FAM91A1Q658Y4 838 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 LAYNQ6UX15 382 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 SNX31Q8N9S9 440 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms