RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 SNF5P18480 905 aa4.44□□□□□ -1.7
snR54snR54 SYP1P25623 870 aaKnown RBP4.44□□□□□ -1.7
snR54snR54 CCZ1P38273 704 aa4.44□□□□□ -1.7
snR54snR54 FOL2P51601 243 aaKnown RBP4.44□□□□□ -1.7
snR54snR54 TNA1P53322 534 aa4.44□□□□□ -1.7
snR54snR54 HOS3Q02959 697 aaKnown RBP4.44□□□□□ -1.7
snR54snR54 NBA1Q08229 501 aaKnown RBP4.44□□□□□ -1.7
snR54snR54 MLS1P30952 554 aa4.43□□□□□ -1.7
snR54snR54 THI80P35202 319 aa4.43□□□□□ -1.7
snR54snR54 BAP2P38084 609 aa4.43□□□□□ -1.7
snR54snR54 ENT3P47160 408 aa4.43□□□□□ -1.7
snR54snR54 YPL260WQ08977 551 aa4.43□□□□□ -1.7
snR54snR54 YER152CP10356 443 aa4.42□□□□□ -1.7
snR54snR54 ASF1P32447 279 aa4.42□□□□□ -1.7
snR54snR54 PRP6P19735 899 aaPredicted RBP4.41□□□□□ -1.7
snR54snR54 DBP5P20449 482 aaKnown RBP4.41□□□□□ -1.7
snR54snR54 RER2P35196 286 aa4.41□□□□□ -1.7
snR54snR54 ABZ1P37254 787 aaPredicted RBP4.41□□□□□ -1.7
snR54snR54 RGD1P38339 666 aa4.41□□□□□ -1.7
snR54snR54 PIK1P39104 1066 aa4.41□□□□□ -1.7
snR54snR54 RPN3P40016 523 aaKnown RBP4.41□□□□□ -1.7
snR54snR54 CNN1P43618 361 aa4.41□□□□□ -1.7
snR54snR54 TIF35Q04067 274 aaKnown RBP4.41□□□□□ -1.7
snR54snR54 RSB1Q08417 382 aa4.41□□□□□ -1.7
snR54snR54 PUF4P25339 888 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
snR54snR54 DUT1P33317 147 aa4.4□□□□□ -1.71
snR54snR54 MCM7P38132 845 aa4.4□□□□□ -1.71
snR54snR54 MPH1P40562 993 aa4.4□□□□□ -1.71
snR54snR54 SNO2P53823 222 aa4.4□□□□□ -1.71
snR54snR54 RTT10Q08924 1013 aa4.4□□□□□ -1.71
snR54snR54 PET112P33893 541 aa4.39□□□□□ -1.71
snR54snR54 TAF1P46677 1066 aa4.39□□□□□ -1.71
snR54snR54 ESC8Q08119 714 aa4.39□□□□□ -1.71
snR54snR54 YPL277CQ08989 487 aa4.39□□□□□ -1.71
snR54snR54 RPS13P05756 151 aaKnown RBP4.38□□□□□ -1.71
snR54snR54 RAD27P26793 382 aa4.38□□□□□ -1.71
snR54snR54 TOD6P34219 525 aa4.38□□□□□ -1.71
snR54snR54 MOT2P34909 587 aaKnown RBP4.38□□□□□ -1.71
snR54snR54 SEC26P41810 973 aaKnown RBP4.38□□□□□ -1.71
snR54snR54 RIM8P53179 542 aa4.38□□□□□ -1.71
snR54snR54 EEB1Q02891 456 aa4.38□□□□□ -1.71
snR54snR54 RMD1Q03441 430 aa4.38□□□□□ -1.71
snR54snR54 CYC1P00044 109 aaPredicted RBP4.37□□□□□ -1.71
snR54snR54 TRP2P00899 507 aaKnown RBP4.37□□□□□ -1.71
snR54snR54 YKL222CP35995 705 aa4.37□□□□□ -1.71
snR54snR54 MXR1P40029 184 aa4.37□□□□□ -1.71
snR54snR54 HNT2P49775 206 aa4.37□□□□□ -1.71
snR54snR54 MAP1Q01662 387 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
snR54snR54 RIB2Q12362 591 aaKnown RBP4.37□□□□□ -1.71
snR54snR54 SOD2P00447 233 aa4.36□□□□□ -1.71
snR54snR54 CDC34P14682 295 aa4.36□□□□□ -1.71
snR54snR54 BAS1P22035 811 aa4.36□□□□□ -1.71
snR54snR54 DBP2P24783 546 aaKnown RBP4.36□□□□□ -1.71
snR54snR54 YCR015CP25616 317 aa4.36□□□□□ -1.71
snR54snR54 FLR1P38124 548 aa4.36□□□□□ -1.71
snR54snR54 ROT1Q03691 256 aa4.36□□□□□ -1.71
snR54snR54 NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
snR54snR54 YPL066WQ12194 479 aa4.36□□□□□ -1.71
snR54snR54 SRM1P21827 482 aa4.35□□□□□ -1.71
snR54snR54 RFC5P38251 354 aa4.35□□□□□ -1.71
snR54snR54 YDR132CQ03900 495 aa4.35□□□□□ -1.71
snR54snR54 SGD1Q06132 899 aa4.35□□□□□ -1.71
snR54snR54 TMA46Q12000 345 aaKnown RBP4.35□□□□□ -1.71
snR54snR54 GNT1Q12096 491 aa4.35□□□□□ -1.71
snR54snR54 SVS1Q12254 260 aa4.35□□□□□ -1.71
snR54snR54 RPL11AP0C0W9 174 aaKnown RBP4.34□□□□□ -1.71
snR54snR54 INO1P11986 533 aa4.34□□□□□ -1.71
snR54snR54 CMP2P14747 604 aa4.34□□□□□ -1.71
snR54snR54 LYP1P32487 611 aa4.34□□□□□ -1.71
snR54snR54 LAM1P38851 1228 aa4.34□□□□□ -1.71
snR54snR54 GIP4P39732 760 aa4.34□□□□□ -1.71
snR54snR54 SPT20P50875 604 aa4.34□□□□□ -1.71
snR54snR54 TYW3P53177 273 aa4.34□□□□□ -1.71
snR54snR54 ENV11P53246 860 aa4.34□□□□□ -1.71
snR54snR54 PLB2Q03674 706 aa4.34□□□□□ -1.71
snR54snR54 ESC2Q06340 456 aa4.34□□□□□ -1.71
snR54snR54 YOR352WQ08816 343 aa4.34□□□□□ -1.71
snR54snR54 RPL11BQ3E757 174 aaPredicted RBP4.34□□□□□ -1.71
snR54snR54 BI4P03879 638 aa4.33□□□□□ -1.72
snR54snR54 GAL10P04397 699 aa4.33□□□□□ -1.72
snR54snR54 UGA2P38067 497 aa4.33□□□□□ -1.72
snR54snR54 MEF2P39677 819 aa4.33□□□□□ -1.72
snR54snR54 MET10P39692 1035 aa4.33□□□□□ -1.72
snR54snR54 GCN5Q03330 439 aa4.33□□□□□ -1.72
snR54snR54 RSM24Q03976 319 aa4.33□□□□□ -1.72
snR54snR54 APL1P27351 700 aa4.32□□□□□ -1.72
snR54snR54 FAA4P47912 694 aaKnown RBP4.32□□□□□ -1.72
snR54snR54 YLR225CQ05948 407 aaKnown RBP4.32□□□□□ -1.72
snR54snR54 VTS1Q08831 523 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
snR54snR54 ACM1Q08981 209 aa4.32□□□□□ -1.72
snR54snR54 SLA2P33338 968 aa4.31□□□□□ -1.72
snR54snR54 MNR2P35724 969 aa4.31□□□□□ -1.72
snR54snR54 PNT1P38969 423 aa4.31□□□□□ -1.72
snR54snR54 YGL176CP46945 554 aa4.31□□□□□ -1.72
snR54snR54 SPP382Q06411 708 aaPredicted RBP4.31□□□□□ -1.72
snR54snR54 ACE2P21192 770 aa4.3□□□□□ -1.72
snR54snR54 YKL107WP34251 309 aa4.3□□□□□ -1.72
snR54snR54 SIP5P40210 489 aaKnown RBP4.3□□□□□ -1.72
snR54snR54 DUS4Q06063 367 aa4.3□□□□□ -1.72
snR54snR54 KIN2P13186 1147 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms