RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	MLS1	P30952	554 aa		4.2	□□□□□ -1.74
snR35	snR35	NNK1	P36003	928 aa		4.2	□□□□□ -1.74
snR35	snR35	QNS1	P38795	714 aa	Known RBP	4.2	□□□□□ -1.74
snR35	snR35	YGL081W	P53156	320 aa		4.2	□□□□□ -1.74
snR35	snR35	YGR035C	P53222	116 aa		4.2	□□□□□ -1.74
snR35	snR35	TAF8	Q03750	510 aa		4.2	□□□□□ -1.74
snR35	snR35	DOT1	Q04089	582 aa	Known RBP	4.2	□□□□□ -1.74
snR35	snR35	RSA3	Q05942	220 aa	Known RBP	4.2	□□□□□ -1.74
snR35	snR35	HRK1	Q08732	759 aa	Known RBP	4.2	□□□□□ -1.74
snR35	snR35	ALG6	Q12001	544 aa	Known RBP	4.2	□□□□□ -1.74
snR35	snR35	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
snR35	snR35	SFA1	P32771	386 aa		4.19	□□□□□ -1.74
snR35	snR35	SMY2	P32909	740 aa	Known RBP	4.19	□□□□□ -1.74
snR35	snR35	RPN3	P40016	523 aa	Known RBP	4.19	□□□□□ -1.74
snR35	snR35	SIP5	P40210	489 aa	Known RBP	4.19	□□□□□ -1.74
snR35	snR35	ALR2	P43553	858 aa		4.19	□□□□□ -1.74
snR35	snR35	KIP3	P53086	805 aa	Known RBP	4.19	□□□□□ -1.74
snR35	snR35	ELA1	P53861	379 aa	Predicted RBP	4.19	□□□□□ -1.74
snR35	snR35	IOC4	Q04213	475 aa		4.19	□□□□□ -1.74
snR35	snR35	YDL124W	Q07551	312 aa	Known RBP	4.19	□□□□□ -1.74
snR35	snR35	RET1	P22276	1149 aa	Known RBP	4.18	□□□□□ -1.74
snR35	snR35	NFS1	P25374	497 aa		4.18	□□□□□ -1.74
snR35	snR35	THI4	P32318	326 aa		4.18	□□□□□ -1.74
snR35	snR35	CDC11	P32458	415 aa		4.18	□□□□□ -1.74
snR35	snR35	RRM3	P38766	723 aa		4.18	□□□□□ -1.74
snR35	snR35	MNN1	P39106	762 aa		4.18	□□□□□ -1.74
snR35	snR35	MBP1	P39678	833 aa		4.18	□□□□□ -1.74
snR35	snR35	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
snR35	snR35	NCE103	P53615	221 aa		4.18	□□□□□ -1.74
snR35	snR35	YLR257W	Q06146	321 aa	Known RBP	4.18	□□□□□ -1.74
snR35	snR35	SPP382	Q06411	708 aa	Predicted RBP	4.18	□□□□□ -1.74
snR35	snR35	TY1A-NL1	Q12391	440 aa	Known RBP	4.18	□□□□□ -1.74
snR35	snR35	SPO21	Q12411	609 aa		4.18	□□□□□ -1.74
snR35	snR35	AI1	P03875	834 aa		4.17	□□□□□ -1.74
snR35	snR35	KIP1	P28742	1111 aa		4.17	□□□□□ -1.74
snR35	snR35	PNT1	P38969	423 aa		4.17	□□□□□ -1.74
snR35	snR35	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
snR35	snR35	UBX5	Q06682	500 aa		4.17	□□□□□ -1.74
snR35	snR35	YGR161W-C	Q3E744	92 aa		4.17	□□□□□ -1.74
snR35	snR35	ERR1	P0CX10	437 aa		4.16	□□□□□ -1.74
snR35	snR35	ERR2	P0CX11	437 aa		4.16	□□□□□ -1.74
snR35	snR35	YER152C	P10356	443 aa		4.16	□□□□□ -1.74
snR35	snR35	MSH2	P25847	964 aa		4.16	□□□□□ -1.74
snR35	snR35	HBS1	P32769	611 aa	Known RBP	4.16	□□□□□ -1.74
snR35	snR35	CCC2	P38995	1004 aa		4.16	□□□□□ -1.74
snR35	snR35	BOI2	P39969	1040 aa		4.16	□□□□□ -1.74
snR35	snR35	SIT1	P39980	628 aa		4.16	□□□□□ -1.74
snR35	snR35	MSH4	P40965	878 aa	Predicted RBP	4.16	□□□□□ -1.74
snR35	snR35	RTA1	P53047	317 aa		4.16	□□□□□ -1.74
snR35	snR35	RPL11A	P0C0W9	174 aa	Known RBP	4.15	□□□□□ -1.75
snR35	snR35	RSC6	P25632	483 aa		4.15	□□□□□ -1.75
snR35	snR35	GPT2	P36148	743 aa		4.15	□□□□□ -1.75
snR35	snR35	BET3	P36149	193 aa		4.15	□□□□□ -1.75
snR35	snR35	GEM1	P39722	662 aa		4.15	□□□□□ -1.75
snR35	snR35	ALT1	P52893	592 aa		4.15	□□□□□ -1.75
snR35	snR35	BUD9	P53226	547 aa		4.15	□□□□□ -1.75
snR35	snR35	YNR014W	P53719	212 aa		4.15	□□□□□ -1.75
snR35	snR35	UGO1	Q03327	502 aa		4.15	□□□□□ -1.75
snR35	snR35	RPL11B	Q3E757	174 aa	Predicted RBP	4.15	□□□□□ -1.75
snR35	snR35	HBN1	Q96VH4	193 aa		4.15	□□□□□ -1.75
snR35	snR35	AI3	P03877	415 aa		4.14	□□□□□ -1.75
snR35	snR35	THS1	P04801	734 aa	Known RBP	4.14	□□□□□ -1.75
snR35	snR35	AAR2	P32357	355 aa	Predicted RBP	4.14	□□□□□ -1.75
snR35	snR35	MCX1	P38323	520 aa	Predicted RBP	4.14	□□□□□ -1.75
snR35	snR35	TNA1	P53322	534 aa		4.14	□□□□□ -1.75
snR35	snR35	SRP1	Q02821	542 aa	Known RBP	4.14	□□□□□ -1.75
snR35	snR35	YDR306C	Q06640	478 aa		4.14	□□□□□ -1.75
snR35	snR35	PUS7	Q08647	676 aa	Known RBP	4.14	□□□□□ -1.75
snR35	snR35	ACM1	Q08981	209 aa		4.14	□□□□□ -1.75
snR35	snR35	NOP14	Q99207	810 aa	Known RBP	4.14	□□□□□ -1.75
snR35	snR35	COQ4	O13525	335 aa		4.13	□□□□□ -1.75
snR35	snR35	PPH3	P32345	308 aa		4.13	□□□□□ -1.75
snR35	snR35	CDC12	P32468	407 aa	Known RBP	4.13	□□□□□ -1.75
snR35	snR35	DOM34	P33309	386 aa		4.13	□□□□□ -1.75
snR35	snR35	PET10	P36139	283 aa		4.13	□□□□□ -1.75
snR35	snR35	GDH3	P39708	457 aa		4.13	□□□□□ -1.75
snR35	snR35	YJL045W	P47052	634 aa		4.13	□□□□□ -1.75
snR35	snR35	YJR142W	P47173	342 aa		4.13	□□□□□ -1.75
snR35	snR35	HOS3	Q02959	697 aa	Known RBP	4.13	□□□□□ -1.75
snR35	snR35	TPP1	Q03796	238 aa		4.13	□□□□□ -1.75
snR35	snR35	DUS3	Q06053	668 aa	Known RBP	4.13	□□□□□ -1.75
snR35	snR35	GIC2	Q06648	383 aa		4.13	□□□□□ -1.75
snR35	snR35	NTG2	Q08214	380 aa		4.13	□□□□□ -1.75
snR35	snR35	YLL058W	Q12198	575 aa		4.13	□□□□□ -1.75
snR35	snR35	ADE8	P04161	214 aa		4.12	□□□□□ -1.75
snR35	snR35	TOM70	P07213	617 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	RPS4A	P0CX35	261 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	RPS4B	P0CX36	261 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	DBP2	P24783	546 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	TRK2	P28584	889 aa		4.12	□□□□□ -1.75
snR35	snR35	YSC84	P32793	468 aa		4.12	□□□□□ -1.75
snR35	snR35	SLA2	P33338	968 aa		4.12	□□□□□ -1.75
snR35	snR35	BAP2	P38084	609 aa		4.12	□□□□□ -1.75
snR35	snR35	GPB2	P39717	880 aa		4.12	□□□□□ -1.75
snR35	snR35	SBE2	P42223	864 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	UBP6	P43593	499 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	HSV2	P50079	448 aa	Predicted RBP	4.12	□□□□□ -1.75
snR35	snR35	ARI1	P53111	347 aa	Known RBP	4.12	□□□□□ -1.75
snR35	snR35	LCD1	Q04377	747 aa		4.12	□□□□□ -1.75
snR35	snR35	MSD1	P15179	658 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms