RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI1	YPL016W	MUD2	P36084	527 aa	Known RBP	4.09	□□□□□ -1.76
SWI1	YPL016W	VTC2	P43585	828 aa		4.09	□□□□□ -1.76
SWI1	YPL016W	PSP2	P50109	593 aa	Known RBP	4.09	□□□□□ -1.76
SWI1	YPL016W	PET122	P10355	254 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	MRPS28	P21771	286 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	SSA4	P22202	642 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	VAN1	P23642	535 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	STE13	P33894	931 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	LHS1	P36016	881 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	MAL33	P38157	468 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	FZO1	P38297	855 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	FTH1	P38310	465 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	SIP3	P38717	1229 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	UBP12	P39538	1254 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	TMN3	P40071	706 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	SYG1	P40528	902 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	CCM1	P48237	864 aa	Predicted RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	RPA14	P50106	137 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	RTC4	P53850	401 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	COX20	Q04935	205 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	YPR022C	Q12139	1133 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	GAL11	P19659	1081 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	YKL222C	P35995	705 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	YBR062C	P38239	180 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	DMA1	P38823	416 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	AST2	P39945	430 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	HER2	Q03557	464 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	VPS1	P21576	704 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	MCM4	P30665	933 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	YKR023W	P36119	530 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	PGM2	P37012	569 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	VPS8	P39702	1274 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	BOL3	P39724	118 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	RPH1	P39956	796 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	BOI2	P39969	1040 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	ARI1	P53111	347 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	ELP3	Q02908	557 aa	Known RBP	4.08	□□□□□ -1.76
SWI1	YPL016W	YLH47	Q06493	454 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	PEX15	Q08215	383 aa		4.08	□□□□□ -1.76
SWI1	YPL016W	UBC1	P21734	215 aa	Known RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	SHC1	P39000	512 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	SHE10	P53075	577 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	BSC5	P53755	489 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	INP54	Q08227	384 aa	Known RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	ABP140	Q08641	628 aa	Known RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	GFA1	P14742	717 aa	Known RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	PEP12	P32854	288 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	YER130C	P39959	443 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	YGR266W	P53326	701 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	NCS2	P53923	493 aa	Predicted RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	ADA2	Q02336	434 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	SRT1	Q03175	343 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	DDP1	Q99321	188 aa	Known RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	ENO2	P00925	437 aa	Known RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	RAD53	P22216	821 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	RDS1	P25611	832 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	CDC15	P27636	974 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	SEC65	P29478	273 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	PFF1	P38244	976 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	SMF1	P38925	575 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	UTP18	P40362	594 aa	Predicted RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	ATP25	Q03153	612 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	TAF8	Q03750	510 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	SSQ1	Q05931	657 aa	Predicted RBP	4.07	□□□□□ -1.76
SWI1	YPL016W	SOG2	Q08817	791 aa		4.07	□□□□□ -1.76
SWI1	YPL016W	ADE3	P07245	946 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	PIF1	P07271	859 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	KEX1	P09620	729 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	PET123	P17558	318 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	TRZ1	P36159	838 aa	Predicted RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	REI1	P38344	393 aa	Predicted RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	SDH8	P38345	138 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	RTS1	P38903	757 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	MDE1	P47095	244 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	HGH1	P48362	394 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	ISM1	P48526	1002 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	RSA3	Q05942	220 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	MRD1	Q06106	887 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	MAG2	Q06436	670 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	YLR001C	Q07895	862 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	GPR1	Q12361	961 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	YMR085W	P0CF18	432 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	SSP1	P38871	571 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	AVT6	P40074	448 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	RIO2	P40160	425 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	ULP2	P40537	1034 aa	Predicted RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	SHE4	P51534	789 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	YPR097W	Q06839	1073 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	OCA4	P25366	362 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	PYC2	P32327	1180 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	STO1	P34160	861 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	SET3	P36124	751 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	GDH3	P39708	457 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	ALG2	P43636	503 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	SLU7	Q02775	382 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	YDR179W-A	Q03983	463 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	TSR2	Q06672	205 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	CSR1	Q06705	408 aa	Known RBP	4.06	□□□□□ -1.76
SWI1	YPL016W	YRM1	Q12340	786 aa		4.06	□□□□□ -1.76
SWI1	YPL016W	ARG4	P04076	463 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms