RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	ERS1	P17261	260 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	NAR1	P23503	491 aa	Known RBP	5.27	□□□□□ -1.57
PMS1	YNL082W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
PMS1	YNL082W	YKL077W	P36081	392 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	PAF1	P38351	445 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	YFL054C	P43549	646 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	YGL081W	P53156	320 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	MSD1	P15179	658 aa	Known RBP	5.27	□□□□□ -1.57
PMS1	YNL082W	GUP1	P53154	560 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	SOK2	P53438	785 aa	Predicted RBP	5.27	□□□□□ -1.57
PMS1	YNL082W	UGO1	Q03327	502 aa		5.27	□□□□□ -1.57
PMS1	YNL082W	YER152C	P10356	443 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	CDC11	P32458	415 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	SHU2	P38957	223 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
PMS1	YNL082W	MEC3	Q02574	474 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	ALG6	Q12001	544 aa	Known RBP	5.26	□□□□□ -1.57
PMS1	YNL082W	PNT1	P38969	423 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	HUL4	P40985	892 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	YNR063W	P53749	607 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	ADE12	P80210	433 aa	Known RBP	5.26	□□□□□ -1.57
PMS1	YNL082W	RKM2	Q03942	479 aa		5.26	□□□□□ -1.57
PMS1	YNL082W	NEO1	P40527	1151 aa		5.25	□□□□□ -1.57
PMS1	YNL082W	FPS1	P23900	669 aa		5.25	□□□□□ -1.57
PMS1	YNL082W	NPP1	P25353	742 aa		5.25	□□□□□ -1.57
PMS1	YNL082W	MCM7	P38132	845 aa		5.25	□□□□□ -1.57
PMS1	YNL082W	PMC1	P38929	1173 aa	Predicted RBP	5.25	□□□□□ -1.57
PMS1	YNL082W	UBP6	P43593	499 aa	Known RBP	5.25	□□□□□ -1.57
PMS1	YNL082W	YNL193W	P53870	558 aa		5.25	□□□□□ -1.57
PMS1	YNL082W	TCB3	Q03640	1545 aa	Known RBP	5.24	□□□□□ -1.57
PMS1	YNL082W	PEX6	P33760	1030 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
PMS1	YNL082W	PEX8	P53248	589 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	TGL2	P54857	326 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	SIT1	P39980	628 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	MXR1	P40029	184 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	GIP2	P40036	548 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	SCW11	P53189	542 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	YMR265C	Q03508	461 aa	Known RBP	5.24	□□□□□ -1.57
PMS1	YNL082W	GIS4	Q04233	774 aa		5.24	□□□□□ -1.57
PMS1	YNL082W	RPL11A	P0C0W9	174 aa	Known RBP	5.23	□□□□□ -1.57
PMS1	YNL082W	ARL1	P38116	183 aa	Known RBP	5.23	□□□□□ -1.57
PMS1	YNL082W	TED1	P40533	473 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	YIR007W	P40566	764 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	YGR045C	P53229	120 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	RPL11B	Q3E757	174 aa	Predicted RBP	5.23	□□□□□ -1.57
PMS1	YNL082W	TRK1	P12685	1235 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	PET10	P36139	283 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	NPP2	P39997	493 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	GCV1	P48015	400 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	GNT1	Q12096	491 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	YPR071W	Q12346	211 aa		5.23	□□□□□ -1.57
PMS1	YNL082W	PDC5	P16467	563 aa	Known RBP	5.22	□□□□□ -1.57
PMS1	YNL082W	PRP9	P19736	530 aa	Known RBP	5.22	□□□□□ -1.57
PMS1	YNL082W	RGD1	P38339	666 aa		5.22	□□□□□ -1.57
PMS1	YNL082W	PTC5	Q12511	572 aa		5.22	□□□□□ -1.57
PMS1	YNL082W	TMA17	Q12513	150 aa		5.22	□□□□□ -1.57
PMS1	YNL082W	MDJ1	P35191	511 aa		5.22	□□□□□ -1.57
PMS1	YNL082W	TPM2	P40414	161 aa		5.22	□□□□□ -1.57
PMS1	YNL082W	GIC2	Q06648	383 aa		5.22	□□□□□ -1.57
PMS1	YNL082W	CDC9	P04819	755 aa		5.21	□□□□□ -1.58
PMS1	YNL082W	MET22	P32179	357 aa		5.21	□□□□□ -1.58
PMS1	YNL082W	REI1	P38344	393 aa	Predicted RBP	5.21	□□□□□ -1.58
PMS1	YNL082W	BRE2	P43132	505 aa		5.21	□□□□□ -1.58
PMS1	YNL082W	GYP8	P43570	497 aa		5.21	□□□□□ -1.58
PMS1	YNL082W	THI73	Q07904	523 aa		5.21	□□□□□ -1.58
PMS1	YNL082W	HRQ1	Q05549	1077 aa		5.21	□□□□□ -1.58
PMS1	YNL082W	LCB5	Q06147	687 aa	Known RBP	5.21	□□□□□ -1.58
PMS1	YNL082W	YDL124W	Q07551	312 aa	Known RBP	5.21	□□□□□ -1.58
PMS1	YNL082W	TY4B-P	A0A0B7P3V8	1104 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	VBA3	P25594	458 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	PCL2	P25693	308 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	NMD3	P38861	518 aa	Known RBP	5.2	□□□□□ -1.58
PMS1	YNL082W	ACO2	P39533	789 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	MGS1	P40151	587 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	HNT2	P49775	206 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	TY4A-H	Q6Q5P6	413 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	GPM1	P00950	247 aa	Known RBP	5.2	□□□□□ -1.58
PMS1	YNL082W	KIP1	P28742	1111 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	GPP1	P41277	250 aa	Known RBP	5.2	□□□□□ -1.58
PMS1	YNL082W	YGR237C	P50089	785 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	MTC3	P53077	123 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	YDR306C	Q06640	478 aa		5.2	□□□□□ -1.58
PMS1	YNL082W	RPP1A	P05318	106 aa	Predicted RBP	5.19	□□□□□ -1.58
PMS1	YNL082W	CDC12	P32468	407 aa	Known RBP	5.19	□□□□□ -1.58
PMS1	YNL082W	SLA2	P33338	968 aa		5.19	□□□□□ -1.58
PMS1	YNL082W	QNS1	P38795	714 aa	Known RBP	5.19	□□□□□ -1.58
PMS1	YNL082W	YAR028W	P39548	234 aa		5.19	□□□□□ -1.58
PMS1	YNL082W	GPB2	P39717	880 aa		5.19	□□□□□ -1.58
PMS1	YNL082W	SPP382	Q06411	708 aa	Predicted RBP	5.19	□□□□□ -1.58
PMS1	YNL082W	COG6	P53959	839 aa		5.19	□□□□□ -1.58
PMS1	YNL082W	RSA3	Q05942	220 aa	Known RBP	5.19	□□□□□ -1.58
PMS1	YNL082W	RCL1	Q08096	367 aa	Predicted RBP	5.19	□□□□□ -1.58
PMS1	YNL082W	TOK1	P40310	691 aa		5.18	□□□□□ -1.58
PMS1	YNL082W	YOR378W	Q08902	515 aa		5.18	□□□□□ -1.58
PMS1	YNL082W	MIH1	P23748	554 aa		5.18	□□□□□ -1.58
PMS1	YNL082W	SPC29	P33419	253 aa		5.18	□□□□□ -1.58
PMS1	YNL082W	PGM2	P37012	569 aa	Known RBP	5.18	□□□□□ -1.58
PMS1	YNL082W	LEM3	P42838	414 aa		5.18	□□□□□ -1.58
PMS1	YNL082W	ELG1	Q12050	791 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms