RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C HXT15P54854 567 aa5.26□□□□□ -1.57
SSO2YMR183C OYE2Q03558 400 aaKnown RBP5.26□□□□□ -1.57
SSO2YMR183C MRL1Q06815 381 aa5.26□□□□□ -1.57
SSO2YMR183C MKK2P32491 506 aa5.25□□□□□ -1.57
SSO2YMR183C PEP7P32609 515 aa5.25□□□□□ -1.57
SSO2YMR183C FLR1P38124 548 aa5.25□□□□□ -1.57
SSO2YMR183C BRN1P38170 754 aa5.24□□□□□ -1.57
SSO2YMR183C RAT1Q02792 1006 aaKnown RBP5.24□□□□□ -1.57
SSO2YMR183C YPL260WQ08977 551 aa5.24□□□□□ -1.57
SSO2YMR183C COQ4O13525 335 aa5.23□□□□□ -1.57
SSO2YMR183C TNA1P53322 534 aa5.23□□□□□ -1.57
SSO2YMR183C RTT10Q08924 1013 aa5.23□□□□□ -1.57
SSO2YMR183C SYP1P25623 870 aaKnown RBP5.22□□□□□ -1.57
SSO2YMR183C RAD27P26793 382 aa5.22□□□□□ -1.57
SSO2YMR183C RGD1P38339 666 aa5.22□□□□□ -1.57
SSO2YMR183C GPB2P39717 880 aa5.22□□□□□ -1.57
SSO2YMR183C RPN3P40016 523 aaKnown RBP5.22□□□□□ -1.57
SSO2YMR183C HOS3Q02959 697 aaKnown RBP5.22□□□□□ -1.57
SSO2YMR183C RSC58Q07979 502 aa5.22□□□□□ -1.57
SSO2YMR183C SPO21Q12411 609 aa5.22□□□□□ -1.57
SSO2YMR183C TAD3Q9URQ3 322 aa5.22□□□□□ -1.57
SSO2YMR183C TOP1P04786 769 aa5.21□□□□□ -1.58
SSO2YMR183C AIM26P32858 118 aa5.21□□□□□ -1.58
SSO2YMR183C BAP2P38084 609 aa5.21□□□□□ -1.58
SSO2YMR183C CNN1P43618 361 aa5.21□□□□□ -1.58
SSO2YMR183C FOL2P51601 243 aaKnown RBP5.21□□□□□ -1.58
SSO2YMR183C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SSO2YMR183C RCL1Q08096 367 aaPredicted RBP5.21□□□□□ -1.58
SSO2YMR183C NBA1Q08229 501 aaKnown RBP5.21□□□□□ -1.58
SSO2YMR183C DBP5P20449 482 aaKnown RBP5.2□□□□□ -1.58
SSO2YMR183C CCZ1P38273 704 aa5.2□□□□□ -1.58
SSO2YMR183C TMA46Q12000 345 aaKnown RBP5.2□□□□□ -1.58
SSO2YMR183C SNF5P18480 905 aa5.19□□□□□ -1.58
SSO2YMR183C PET112P33893 541 aa5.19□□□□□ -1.58
SSO2YMR183C RER2P35196 286 aa5.19□□□□□ -1.58
SSO2YMR183C PIK1P39104 1066 aa5.19□□□□□ -1.58
SSO2YMR183C PRP6P19735 899 aaPredicted RBP5.18□□□□□ -1.58
SSO2YMR183C MLS1P30952 554 aa5.18□□□□□ -1.58
SSO2YMR183C SPC42P36094 363 aa5.18□□□□□ -1.58
SSO2YMR183C ENV11P53246 860 aa5.18□□□□□ -1.58
SSO2YMR183C YDL177CQ12257 170 aa5.18□□□□□ -1.58
SSO2YMR183C SPS1P08458 490 aa5.17□□□□□ -1.58
SSO2YMR183C CDC34P14682 295 aa5.17□□□□□ -1.58
SSO2YMR183C PUF4P25339 888 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
SSO2YMR183C DUT1P33317 147 aa5.17□□□□□ -1.58
SSO2YMR183C MNR2P35724 969 aa5.17□□□□□ -1.58
SSO2YMR183C OCA5P38738 679 aa5.17□□□□□ -1.58
SSO2YMR183C ETP1P38748 585 aaKnown RBP5.17□□□□□ -1.58
SSO2YMR183C MPH1P40562 993 aa5.17□□□□□ -1.58
SSO2YMR183C HNT2P49775 206 aa5.17□□□□□ -1.58
SSO2YMR183C TIF35Q04067 274 aaKnown RBP5.17□□□□□ -1.58
SSO2YMR183C RSB1Q08417 382 aa5.17□□□□□ -1.58
SSO2YMR183C YER152CP10356 443 aa5.16□□□□□ -1.58
SSO2YMR183C MRPL22P53881 309 aa5.16□□□□□ -1.58
SSO2YMR183C YPT53P36019 220 aa5.15□□□□□ -1.59
SSO2YMR183C SEC26P41810 973 aaKnown RBP5.15□□□□□ -1.59
SSO2YMR183C DOS2P54858 310 aa5.15□□□□□ -1.59
SSO2YMR183C LYP1P32487 611 aa5.14□□□□□ -1.59
SSO2YMR183C SNO2P53823 222 aa5.14□□□□□ -1.59
SSO2YMR183C EEB1Q02891 456 aa5.14□□□□□ -1.59
SSO2YMR183C FPR4Q06205 392 aaPredicted RBP5.14□□□□□ -1.59
SSO2YMR183C GNT1Q12096 491 aa5.14□□□□□ -1.59
SSO2YMR183C TRP2P00899 507 aaKnown RBP5.13□□□□□ -1.59
SSO2YMR183C MCM7P38132 845 aa5.13□□□□□ -1.59
SSO2YMR183C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SSO2YMR183C YFL054CP43549 646 aa5.12□□□□□ -1.59
SSO2YMR183C GSF2Q04697 403 aaKnown RBP5.12□□□□□ -1.59
SSO2YMR183C AIM3P38266 947 aaKnown RBP5.11□□□□□ -1.59
SSO2YMR183C NNF1P47149 201 aa5.11□□□□□ -1.59
SSO2YMR183C TYW3P53177 273 aa5.11□□□□□ -1.59
SSO2YMR183C SVF1Q05515 481 aa5.11□□□□□ -1.59
SSO2YMR183C SOD2P00447 233 aa5.1□□□□□ -1.59
SSO2YMR183C RPL11AP0C0W9 174 aaKnown RBP5.1□□□□□ -1.59
SSO2YMR183C INO1P11986 533 aa5.1□□□□□ -1.59
SSO2YMR183C BAS1P22035 811 aa5.1□□□□□ -1.59
SSO2YMR183C ABZ1P37254 787 aaPredicted RBP5.1□□□□□ -1.59
SSO2YMR183C RFC5P38251 354 aa5.1□□□□□ -1.59
SSO2YMR183C RIM8P53179 542 aa5.1□□□□□ -1.59
SSO2YMR183C YGR053CP53234 283 aa5.1□□□□□ -1.59
SSO2YMR183C RKM4Q12504 494 aa5.1□□□□□ -1.59
SSO2YMR183C RPL11BQ3E757 174 aaPredicted RBP5.1□□□□□ -1.59
SSO2YMR183C CLN2P20438 545 aa5.09□□□□□ -1.59
SSO2YMR183C MXR1P40029 184 aa5.09□□□□□ -1.59
SSO2YMR183C RSM24Q03976 319 aa5.09□□□□□ -1.59
SSO2YMR183C SPO20Q04359 397 aa5.09□□□□□ -1.59
SSO2YMR183C ATG13Q06628 738 aa5.09□□□□□ -1.59
SSO2YMR183C YOR352WQ08816 343 aa5.09□□□□□ -1.59
SSO2YMR183C ACM1Q08981 209 aa5.09□□□□□ -1.59
SSO2YMR183C MOT2P34909 587 aaKnown RBP5.08□□□□□ -1.6
SSO2YMR183C NMD2P38798 1089 aaKnown RBP5.08□□□□□ -1.6
SSO2YMR183C PNT1P38969 423 aa5.08□□□□□ -1.6
SSO2YMR183C GEM1P39722 662 aa5.08□□□□□ -1.6
SSO2YMR183C SGD1Q06132 899 aa5.08□□□□□ -1.6
SSO2YMR183C SPP382Q06411 708 aaPredicted RBP5.08□□□□□ -1.6
SSO2YMR183C YPL277CQ08989 487 aa5.08□□□□□ -1.6
SSO2YMR183C SVS1Q12254 260 aa5.08□□□□□ -1.6
SSO2YMR183C CYC1P00044 109 aaPredicted RBP5.07□□□□□ -1.6
SSO2YMR183C RPS13P05756 151 aaKnown RBP5.07□□□□□ -1.6
SSO2YMR183C DBP2P24783 546 aaKnown RBP5.07□□□□□ -1.6
SSO2YMR183C UGA2P38067 497 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms