RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W CCZ1P38273 704 aa2.84□□□□□ -1.95
SPT21YMR179W SEC26P41810 973 aaKnown RBP2.84□□□□□ -1.95
SPT21YMR179W MRPS18P42847 217 aa2.84□□□□□ -1.95
SPT21YMR179W SIW14P53965 281 aa2.84□□□□□ -1.95
SPT21YMR179W YPL260WQ08977 551 aa2.84□□□□□ -1.95
SPT21YMR179W RAD2P07276 1031 aa2.84□□□□□ -1.96
SPT21YMR179W ENT3P47160 408 aa2.84□□□□□ -1.96
SPT21YMR179W CLU1Q03690 1277 aaKnown RBP2.84□□□□□ -1.96
SPT21YMR179W SGD1Q06132 899 aa2.84□□□□□ -1.96
SPT21YMR179W SPO21Q12411 609 aa2.84□□□□□ -1.96
SPT21YMR179W LAM1P38851 1228 aa2.83□□□□□ -1.96
SPT21YMR179W MEF2P39677 819 aa2.83□□□□□ -1.96
SPT21YMR179W CYC1P00044 109 aaPredicted RBP2.82□□□□□ -1.96
SPT21YMR179W YFL054CP43549 646 aa2.82□□□□□ -1.96
SPT21YMR179W HNT2P49775 206 aa2.82□□□□□ -1.96
SPT21YMR179W GCN5Q03330 439 aa2.82□□□□□ -1.96
SPT21YMR179W DUS4Q06063 367 aa2.82□□□□□ -1.96
SPT21YMR179W YLR358CO13565 187 aa2.82□□□□□ -1.96
SPT21YMR179W SRM1P21827 482 aa2.82□□□□□ -1.96
SPT21YMR179W SEC8P32855 1065 aa2.82□□□□□ -1.96
SPT21YMR179W RPS26AP39938 119 aaKnown RBP2.82□□□□□ -1.96
SPT21YMR179W RPS26BP39939 119 aaKnown RBP2.82□□□□□ -1.96
SPT21YMR179W PLB2Q03674 706 aa2.82□□□□□ -1.96
SPT21YMR179W CTS1P29029 562 aa2.81□□□□□ -1.96
SPT21YMR179W RGD1P38339 666 aa2.81□□□□□ -1.96
SPT21YMR179W RSB1Q08417 382 aa2.81□□□□□ -1.96
SPT21YMR179W RIB2Q12362 591 aaKnown RBP2.81□□□□□ -1.96
SPT21YMR179W GCR1P07261 785 aa2.81□□□□□ -1.96
SPT21YMR179W YER152CP10356 443 aa2.81□□□□□ -1.96
SPT21YMR179W ATE1P16639 503 aa2.81□□□□□ -1.96
SPT21YMR179W PUF4P25339 888 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SPT21YMR179W DOM34P33309 386 aa2.81□□□□□ -1.96
SPT21YMR179W SHM2P37291 469 aaKnown RBP2.81□□□□□ -1.96
SPT21YMR179W YJR107WP47145 328 aa2.81□□□□□ -1.96
SPT21YMR179W RRP15Q06511 250 aaPredicted RBP2.81□□□□□ -1.96
SPT21YMR179W SYP1P25623 870 aaKnown RBP2.8□□□□□ -1.96
SPT21YMR179W MCM2P29469 868 aa2.8□□□□□ -1.96
SPT21YMR179W TAT2P38967 592 aa2.8□□□□□ -1.96
SPT21YMR179W CNN1P43618 361 aa2.8□□□□□ -1.96
SPT21YMR179W SPT20P50875 604 aa2.8□□□□□ -1.96
SPT21YMR179W ROT1Q03691 256 aa2.8□□□□□ -1.96
SPT21YMR179W CDC6P09119 513 aa2.8□□□□□ -1.96
SPT21YMR179W MLS1P30952 554 aa2.8□□□□□ -1.96
SPT21YMR179W MPH1P40562 993 aa2.8□□□□□ -1.96
SPT21YMR179W POL32P47110 350 aa2.8□□□□□ -1.96
SPT21YMR179W MRL1Q06815 381 aa2.8□□□□□ -1.96
SPT21YMR179W GAL10P04397 699 aa2.79□□□□□ -1.96
SPT21YMR179W DBP5P20449 482 aaKnown RBP2.79□□□□□ -1.96
SPT21YMR179W SLD2P34252 453 aa2.79□□□□□ -1.96
SPT21YMR179W RFC5P38251 354 aa2.79□□□□□ -1.96
SPT21YMR179W FYV10P40492 516 aa2.79□□□□□ -1.96
SPT21YMR179W GSF2Q04697 403 aaKnown RBP2.79□□□□□ -1.96
SPT21YMR179W SPR28Q04921 423 aa2.79□□□□□ -1.96
SPT21YMR179W MGE1P38523 228 aa2.79□□□□□ -1.96
SPT21YMR179W RSM24Q03976 319 aa2.79□□□□□ -1.96
SPT21YMR179W ATG13Q06628 738 aa2.79□□□□□ -1.96
SPT21YMR179W YOR352WQ08816 343 aa2.79□□□□□ -1.96
SPT21YMR179W CMP2P14747 604 aa2.78□□□□□ -1.96
SPT21YMR179W CDC20P26309 610 aa2.78□□□□□ -1.96
SPT21YMR179W RER2P35196 286 aa2.78□□□□□ -1.96
SPT21YMR179W MPT5P39016 859 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SPT21YMR179W SIZ1Q04195 904 aa2.78□□□□□ -1.96
SPT21YMR179W SVS1Q12254 260 aa2.78□□□□□ -1.96
SPT21YMR179W TIF35Q04067 274 aaKnown RBP2.77□□□□□ -1.97
SPT21YMR179W BAS1P22035 811 aa2.77□□□□□ -1.97
SPT21YMR179W LST4P34239 828 aa2.77□□□□□ -1.97
SPT21YMR179W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SPT21YMR179W TUB2P02557 457 aaKnown RBP2.76□□□□□ -1.97
SPT21YMR179W DBP2P24783 546 aaKnown RBP2.76□□□□□ -1.97
SPT21YMR179W MXR1P40029 184 aa2.76□□□□□ -1.97
SPT21YMR179W VPS62P53285 467 aa2.76□□□□□ -1.97
SPT21YMR179W ACK1Q07622 623 aaPredicted RBP2.76□□□□□ -1.97
SPT21YMR179W RTT10Q08924 1013 aa2.76□□□□□ -1.97
SPT21YMR179W RPL11AP0C0W9 174 aaKnown RBP2.76□□□□□ -1.97
SPT21YMR179W ACE2P21192 770 aa2.76□□□□□ -1.97
SPT21YMR179W DUT1P33317 147 aa2.76□□□□□ -1.97
SPT21YMR179W MSC2Q03455 724 aa2.76□□□□□ -1.97
SPT21YMR179W ESF1Q06344 628 aaKnown RBP2.76□□□□□ -1.97
SPT21YMR179W RXT3Q07458 294 aa2.76□□□□□ -1.97
SPT21YMR179W NOP8Q08287 484 aaPredicted RBP2.76□□□□□ -1.97
SPT21YMR179W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
SPT21YMR179W GPB1Q08886 897 aa2.76□□□□□ -1.97
SPT21YMR179W GNT1Q12096 491 aa2.76□□□□□ -1.97
SPT21YMR179W RPL11BQ3E757 174 aaPredicted RBP2.76□□□□□ -1.97
SPT21YMR179W KIN2P13186 1147 aaKnown RBP2.75□□□□□ -1.97
SPT21YMR179W STE11P23561 717 aa2.75□□□□□ -1.97
SPT21YMR179W APL1P27351 700 aa2.75□□□□□ -1.97
SPT21YMR179W BI4P03879 638 aa2.75□□□□□ -1.97
SPT21YMR179W SLA2P33338 968 aa2.75□□□□□ -1.97
SPT21YMR179W UGA2P38067 497 aa2.75□□□□□ -1.97
SPT21YMR179W PBP1P53297 722 aaKnown RBP2.75□□□□□ -1.97
SPT21YMR179W ACM1Q08981 209 aa2.75□□□□□ -1.97
SPT21YMR179W HMI1Q12039 706 aa2.75□□□□□ -1.97
SPT21YMR179W PNT1P38969 423 aa2.74□□□□□ -1.97
SPT21YMR179W RRT14P40470 206 aa2.74□□□□□ -1.97
SPT21YMR179W MNN10P50108 393 aaKnown RBP2.74□□□□□ -1.97
SPT21YMR179W SLI1P53304 468 aa2.74□□□□□ -1.97
SPT21YMR179W RMD1Q03441 430 aa2.74□□□□□ -1.97
SPT21YMR179W YML020WQ03722 664 aa2.74□□□□□ -1.97
SPT21YMR179W YAP6Q03935 383 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms