RNA–Protein interactions for RNA: YMR094W

CTF13, Transcript of Subunit of the CBF3 complex, yeastyeast

Gene CTF13, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF13YMR094W RPS13P05756 151 aaKnown RBP5.67□□□□□ -1.5
CTF13YMR094W ATE1P16639 503 aa5.67□□□□□ -1.5
CTF13YMR094W MKK2P32491 506 aa5.67□□□□□ -1.5
CTF13YMR094W TOD6P34219 525 aa5.67□□□□□ -1.5
CTF13YMR094W FLR1P38124 548 aa5.67□□□□□ -1.5
CTF13YMR094W RPN3P40016 523 aaKnown RBP5.67□□□□□ -1.5
CTF13YMR094W ENV11P53246 860 aa5.67□□□□□ -1.5
CTF13YMR094W PUF4P25339 888 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CTF13YMR094W PIK1P39104 1066 aa5.66□□□□□ -1.5
CTF13YMR094W ENT3P47160 408 aa5.66□□□□□ -1.5
CTF13YMR094W MRL1Q06815 381 aa5.66□□□□□ -1.5
CTF13YMR094W YOR352WQ08816 343 aa5.66□□□□□ -1.5
CTF13YMR094W GCR1P07261 785 aa5.65□□□□□ -1.5
CTF13YMR094W SNF5P18480 905 aa5.65□□□□□ -1.5
CTF13YMR094W HXT13P39924 564 aa5.65□□□□□ -1.5
CTF13YMR094W SEC26P41810 973 aaKnown RBP5.65□□□□□ -1.5
CTF13YMR094W HXT17P53631 564 aa5.65□□□□□ -1.5
CTF13YMR094W HXT15P54854 567 aa5.65□□□□□ -1.5
CTF13YMR094W SYP1P25623 870 aaKnown RBP5.65□□□□□ -1.51
CTF13YMR094W YJR107WP47145 328 aa5.64□□□□□ -1.51
CTF13YMR094W GNP1P48813 663 aa5.64□□□□□ -1.51
CTF13YMR094W HNT2P49775 206 aa5.64□□□□□ -1.51
CTF13YMR094W YML020WQ03722 664 aa5.64□□□□□ -1.51
CTF13YMR094W SPR28Q04921 423 aa5.64□□□□□ -1.51
CTF13YMR094W RGD1P38339 666 aa5.63□□□□□ -1.51
CTF13YMR094W LAM1P38851 1228 aa5.63□□□□□ -1.51
CTF13YMR094W SGD1Q06132 899 aa5.63□□□□□ -1.51
CTF13YMR094W CYC1P00044 109 aaPredicted RBP5.62□□□□□ -1.51
CTF13YMR094W HEM3P28789 327 aa5.62□□□□□ -1.51
CTF13YMR094W MLS1P30952 554 aa5.62□□□□□ -1.51
CTF13YMR094W ABZ1P37254 787 aaPredicted RBP5.62□□□□□ -1.51
CTF13YMR094W YFL054CP43549 646 aa5.62□□□□□ -1.51
CTF13YMR094W CNN1P43618 361 aa5.62□□□□□ -1.51
CTF13YMR094W YER152CP10356 443 aa5.61□□□□□ -1.51
CTF13YMR094W MEF2P39677 819 aa5.61□□□□□ -1.51
CTF13YMR094W FYV10P40492 516 aa5.61□□□□□ -1.51
CTF13YMR094W RRP15Q06511 250 aaPredicted RBP5.61□□□□□ -1.51
CTF13YMR094W PEP7P32609 515 aa5.6□□□□□ -1.51
CTF13YMR094W RFC5P38251 354 aa5.6□□□□□ -1.51
CTF13YMR094W YDR132CQ03900 495 aa5.6□□□□□ -1.51
CTF13YMR094W YLR358CO13565 187 aa5.59□□□□□ -1.51
CTF13YMR094W DBP5P20449 482 aaKnown RBP5.59□□□□□ -1.51
CTF13YMR094W SPT20P50875 604 aa5.59□□□□□ -1.51
CTF13YMR094W GCN5Q03330 439 aa5.59□□□□□ -1.51
CTF13YMR094W ROT1Q03691 256 aa5.59□□□□□ -1.51
CTF13YMR094W RSM24Q03976 319 aa5.59□□□□□ -1.51
CTF13YMR094W ESF1Q06344 628 aaKnown RBP5.59□□□□□ -1.51
CTF13YMR094W PRE10P21242 288 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
CTF13YMR094W RAD27P26793 382 aa5.58□□□□□ -1.52
CTF13YMR094W NOP8Q08287 484 aaPredicted RBP5.58□□□□□ -1.52
CTF13YMR094W RER2P35196 286 aa5.57□□□□□ -1.52
CTF13YMR094W MPH1P40562 993 aa5.57□□□□□ -1.52
CTF13YMR094W PLB2Q03674 706 aa5.57□□□□□ -1.52
CTF13YMR094W CLU1Q03690 1277 aaKnown RBP5.57□□□□□ -1.52
CTF13YMR094W RTT10Q08924 1013 aa5.57□□□□□ -1.52
CTF13YMR094W CMP2P14747 604 aa5.57□□□□□ -1.52
CTF13YMR094W SVS1Q12254 260 aa5.57□□□□□ -1.52
CTF13YMR094W GAL10P04397 699 aa5.56□□□□□ -1.52
CTF13YMR094W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
CTF13YMR094W TIF35Q04067 274 aaKnown RBP5.56□□□□□ -1.52
CTF13YMR094W SRM1P21827 482 aa5.55□□□□□ -1.52
CTF13YMR094W SHM2P37291 469 aaKnown RBP5.55□□□□□ -1.52
CTF13YMR094W MCM7P38132 845 aa5.55□□□□□ -1.52
CTF13YMR094W TMA46Q12000 345 aaKnown RBP5.55□□□□□ -1.52
CTF13YMR094W KIN2P13186 1147 aaKnown RBP5.54□□□□□ -1.52
CTF13YMR094W BAS1P22035 811 aa5.54□□□□□ -1.52
CTF13YMR094W APL1P27351 700 aa5.54□□□□□ -1.52
CTF13YMR094W RMD1Q03441 430 aa5.54□□□□□ -1.52
CTF13YMR094W OYE2Q03558 400 aaKnown RBP5.54□□□□□ -1.52
CTF13YMR094W DUS4Q06063 367 aa5.54□□□□□ -1.52
CTF13YMR094W ASF1P32447 279 aa5.53□□□□□ -1.52
CTF13YMR094W TAT2P38967 592 aa5.53□□□□□ -1.52
CTF13YMR094W MXR1P40029 184 aa5.53□□□□□ -1.52
CTF13YMR094W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
CTF13YMR094W GNT1Q12096 491 aa5.53□□□□□ -1.52
CTF13YMR094W RIB2Q12362 591 aaKnown RBP5.53□□□□□ -1.52
CTF13YMR094W MPT5P39016 859 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
CTF13YMR094W ATG13Q06628 738 aa5.52□□□□□ -1.53
CTF13YMR094W RPL11AP0C0W9 174 aaKnown RBP5.51□□□□□ -1.53
CTF13YMR094W CTS1P29029 562 aa5.51□□□□□ -1.53
CTF13YMR094W DOM34P33309 386 aa5.51□□□□□ -1.53
CTF13YMR094W UGA2P38067 497 aa5.51□□□□□ -1.53
CTF13YMR094W RXT3Q07458 294 aa5.51□□□□□ -1.53
CTF13YMR094W RPL11BQ3E757 174 aaPredicted RBP5.51□□□□□ -1.53
CTF13YMR094W DBP2P24783 546 aaKnown RBP5.5□□□□□ -1.53
CTF13YMR094W PBP1P53297 722 aaKnown RBP5.5□□□□□ -1.53
CTF13YMR094W ACM1Q08981 209 aa5.5□□□□□ -1.53
CTF13YMR094W DUT1P33317 147 aa5.49□□□□□ -1.53
CTF13YMR094W GEM1P39722 662 aa5.49□□□□□ -1.53
CTF13YMR094W SIZ1Q04195 904 aa5.49□□□□□ -1.53
CTF13YMR094W ACK1Q07622 623 aaPredicted RBP5.49□□□□□ -1.53
CTF13YMR094W GPB1Q08886 897 aa5.49□□□□□ -1.53
CTF13YMR094W ACE2P21192 770 aa5.48□□□□□ -1.53
CTF13YMR094W CDC20P26309 610 aa5.48□□□□□ -1.53
CTF13YMR094W LYP1P32487 611 aa5.48□□□□□ -1.53
CTF13YMR094W PET112P33893 541 aa5.48□□□□□ -1.53
CTF13YMR094W GSF2Q04697 403 aaKnown RBP5.48□□□□□ -1.53
CTF13YMR094W SPP382Q06411 708 aaPredicted RBP5.48□□□□□ -1.53
CTF13YMR094W TRP2P00899 507 aaKnown RBP5.48□□□□□ -1.53
CTF13YMR094W BI4P03879 638 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 183.5 ms