RNA–Protein interactions for RNA: YLR288C

MEC3, Transcript of DNA damage and meiotic pachytene checkpoint protein, yeast

Gene MEC3, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MEC3	YLR288C	RCF1	Q03713	159 aa		5.82	□□□□□ -1.48
MEC3	YLR288C	BUL2	Q03758	920 aa	Known RBP	5.82	□□□□□ -1.48
MEC3	YLR288C	MRL1	Q06815	381 aa		5.82	□□□□□ -1.48
MEC3	YLR288C	FAP7	Q12055	197 aa	Predicted RBP	5.82	□□□□□ -1.48
MEC3	YLR288C	RRP6	Q12149	733 aa	Known RBP	5.82	□□□□□ -1.48
MEC3	YLR288C	QCR6	P00127	147 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	KAR2	P16474	682 aa	Known RBP	5.81	□□□□□ -1.48
MEC3	YLR288C	KRR1	P25586	316 aa	Predicted RBP	5.81	□□□□□ -1.48
MEC3	YLR288C	PTP2	P29461	750 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	PLC1	P32383	869 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	ECM32	P32644	1121 aa	Known RBP	5.81	□□□□□ -1.48
MEC3	YLR288C	ABD1	P32783	436 aa	Predicted RBP	5.81	□□□□□ -1.48
MEC3	YLR288C	PEX5	P35056	612 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	RTA1	P53047	317 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	YNL193W	P53870	558 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	FRK1	Q03002	865 aa	Predicted RBP	5.81	□□□□□ -1.48
MEC3	YLR288C	FMP25	Q08023	583 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	MED1	Q12321	566 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	TCB1	Q12466	1186 aa		5.81	□□□□□ -1.48
MEC3	YLR288C	STO1	P34160	861 aa	Known RBP	5.8	□□□□□ -1.48
MEC3	YLR288C	YKL050C	P35736	922 aa		5.8	□□□□□ -1.48
MEC3	YLR288C	YBL086C	P38177	466 aa		5.8	□□□□□ -1.48
MEC3	YLR288C	RXT2	P38255	430 aa		5.8	□□□□□ -1.48
MEC3	YLR288C	CAJ1	P39101	391 aa		5.8	□□□□□ -1.48
MEC3	YLR288C	YLR257W	Q06146	321 aa	Known RBP	5.8	□□□□□ -1.48
MEC3	YLR288C	TPM1	P17536	199 aa	Known RBP	5.79	□□□□□ -1.48
MEC3	YLR288C	MCM10	P32354	571 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	TFC4	P33339	1025 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	HSP78	P33416	811 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	NUP120	P35729	1037 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	SEA4	P38164	1038 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	BRE2	P43132	505 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	GNP1	P48813	663 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	NUT1	P53114	1132 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	YNL058C	P53947	316 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	ERO1	Q03103	563 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	VTI1	Q04338	217 aa		5.79	□□□□□ -1.48
MEC3	YLR288C	RRP9	Q06506	573 aa	Known RBP	5.79	□□□□□ -1.48
MEC3	YLR288C	SPT6	P23615	1451 aa	Known RBP	5.79	□□□□□ -1.48
MEC3	YLR288C	APA1	P16550	321 aa	Known RBP	5.78	□□□□□ -1.48
MEC3	YLR288C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
MEC3	YLR288C	ARE1	P25628	610 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	CHS3	P29465	1165 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	DBF20	P32328	564 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	IMP2'	P32351	346 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	CAB3	P36076	571 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	VBA5	P36172	582 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	GEM1	P39722	662 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	SEC27	P41811	889 aa	Known RBP	5.78	□□□□□ -1.48
MEC3	YLR288C	PFD1	P46988	109 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	UTP4	Q06679	776 aa	Known RBP	5.78	□□□□□ -1.48
MEC3	YLR288C	SSP2	Q08646	371 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	TRE2	Q08693	809 aa		5.78	□□□□□ -1.48
MEC3	YLR288C	AAD3	P25612	363 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	SMY2	P32909	740 aa	Known RBP	5.77	□□□□□ -1.49
MEC3	YLR288C	MOT2	P34909	587 aa	Known RBP	5.77	□□□□□ -1.49
MEC3	YLR288C	RIM4	P38741	713 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	TMA108	P40462	946 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	AIR1	P40507	360 aa	Known RBP	5.77	□□□□□ -1.49
MEC3	YLR288C	GCR2	Q01722	534 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	TAF8	Q03750	510 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	YLR225C	Q05948	407 aa	Known RBP	5.77	□□□□□ -1.49
MEC3	YLR288C	EAF1	Q06337	982 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	NEW1	Q08972	1196 aa	Known RBP	5.77	□□□□□ -1.49
MEC3	YLR288C	YDR056C	Q12025	205 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	HSL1	P34244	1518 aa		5.77	□□□□□ -1.49
MEC3	YLR288C	RPS31	P05759	152 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	TOM70	P07213	617 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	MEF1	P25039	761 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	CDC60	P26637	1090 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	VMA8	P32610	256 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	MRT4	P33201	236 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	BET3	P36149	193 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	SHM1	P37292	490 aa	Predicted RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	RRP8	P38961	392 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	DJP1	P40564	432 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	HUL4	P40985	892 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	HSV2	P50079	448 aa	Predicted RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	MAL11	P53048	616 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	ERP6	P53198	216 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	BTN2	P53286	410 aa		5.76	□□□□□ -1.49
MEC3	YLR288C	KRE33	P53914	1056 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	HEL2	Q05580	639 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	EMG1	Q06287	252 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	SPN1	Q06505	410 aa	Predicted RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	TMA46	Q12000	345 aa	Known RBP	5.76	□□□□□ -1.49
MEC3	YLR288C	TRP2	P00899	507 aa	Known RBP	5.75	□□□□□ -1.49
MEC3	YLR288C	RPP2B	P02400	110 aa	Known RBP	5.75	□□□□□ -1.49
MEC3	YLR288C	AGP1	P25376	633 aa		5.75	□□□□□ -1.49
MEC3	YLR288C	KAP122	P32767	1081 aa		5.75	□□□□□ -1.49
MEC3	YLR288C	NIC96	P34077	839 aa		5.75	□□□□□ -1.49
MEC3	YLR288C	NOP4	P37838	685 aa	Known RBP	5.75	□□□□□ -1.49
MEC3	YLR288C	YHR218W	P38899	603 aa		5.75	□□□□□ -1.49
MEC3	YLR288C	DLD3	P39976	496 aa	Known RBP	5.75	□□□□□ -1.49
MEC3	YLR288C	RSM26	P47141	266 aa		5.75	□□□□□ -1.49
MEC3	YLR288C	ATP22	P50273	684 aa	Predicted RBP	5.75	□□□□□ -1.49
MEC3	YLR288C	SPT7	P35177	1332 aa		5.75	□□□□□ -1.49
MEC3	YLR288C	SBP1	P10080	294 aa	Known RBP	5.74	□□□□□ -1.49
MEC3	YLR288C	HEM13	P11353	328 aa	Known RBP	5.74	□□□□□ -1.49
MEC3	YLR288C	PYC2	P32327	1180 aa	Known RBP	5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms