RNA–Protein interactions for RNA: YLR068W

FYV7, Essential protein required for maturation of 18S rRNA, yeast

Gene FYV7, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FYV7	YLR068W	YPL277C	Q08989	487 aa		5	□□□□□ -1.61
FYV7	YLR068W	SNF5	P18480	905 aa		4.99	□□□□□ -1.61
FYV7	YLR068W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	RIP-Chip
FYV7	YLR068W	RGD1	P38339	666 aa		4.99	□□□□□ -1.61
FYV7	YLR068W	SPO21	Q12411	609 aa		4.99	□□□□□ -1.61
FYV7	YLR068W	MKK2	P32491	506 aa		4.98	□□□□□ -1.61
FYV7	YLR068W	SEC8	P32855	1065 aa		4.98	□□□□□ -1.61
FYV7	YLR068W	TOD6	P34219	525 aa		4.98	□□□□□ -1.61
FYV7	YLR068W	GPB2	P39717	880 aa		4.98	□□□□□ -1.61
FYV7	YLR068W	RCL1	Q08096	367 aa	Predicted RBP	4.98	□□□□□ -1.61
FYV7	YLR068W	RPS26A	P39938	119 aa	Known RBP	4.97	□□□□□ -1.61
FYV7	YLR068W	RPS26B	P39939	119 aa	Known RBP	4.97	□□□□□ -1.61
FYV7	YLR068W	POL32	P47110	350 aa		4.97	□□□□□ -1.61
FYV7	YLR068W	ROD1	Q02805	837 aa		4.97	□□□□□ -1.61
FYV7	YLR068W	YDR132C	Q03900	495 aa		4.97	□□□□□ -1.61
FYV7	YLR068W	SGD1	Q06132	899 aa		4.97	□□□□□ -1.61
FYV7	YLR068W	YLR358C	O13565	187 aa		4.96	□□□□□ -1.62
FYV7	YLR068W	CNN1	P43618	361 aa		4.96	□□□□□ -1.62
FYV7	YLR068W	YJR107W	P47145	328 aa		4.96	□□□□□ -1.62
FYV7	YLR068W	GNP1	P48813	663 aa		4.96	□□□□□ -1.62
FYV7	YLR068W	MRL1	Q06815	381 aa		4.96	□□□□□ -1.62
FYV7	YLR068W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
FYV7	YLR068W	SYP1	P25623	870 aa	Known RBP	4.95	□□□□□ -1.62
FYV7	YLR068W	HXT13	P39924	564 aa		4.95	□□□□□ -1.62
FYV7	YLR068W	HXT17	P53631	564 aa		4.95	□□□□□ -1.62
FYV7	YLR068W	HXT15	P54854	567 aa		4.95	□□□□□ -1.62
FYV7	YLR068W	RAT1	Q02792	1006 aa	Known RBP	4.95	□□□□□ -1.62
FYV7	YLR068W	ESF1	Q06344	628 aa	Known RBP	4.95	□□□□□ -1.62
FYV7	YLR068W	DBP5	P20449	482 aa	Known RBP	4.94	□□□□□ -1.62
FYV7	YLR068W	ASF1	P32447	279 aa		4.94	□□□□□ -1.62
FYV7	YLR068W	LAM1	P38851	1228 aa		4.94	□□□□□ -1.62
FYV7	YLR068W	GCN5	Q03330	439 aa		4.94	□□□□□ -1.62
FYV7	YLR068W	CLU1	Q03690	1277 aa	Known RBP	4.94	□□□□□ -1.62
FYV7	YLR068W	RSM24	Q03976	319 aa		4.94	□□□□□ -1.62
FYV7	YLR068W	CYC1	P00044	109 aa	Predicted RBP	4.93	□□□□□ -1.62
FYV7	YLR068W	RMD1	Q03441	430 aa		4.93	□□□□□ -1.62
FYV7	YLR068W	RAD27	P26793	382 aa		4.92	□□□□□ -1.62
FYV7	YLR068W	HEM3	P28789	327 aa		4.92	□□□□□ -1.62
FYV7	YLR068W	DOM34	P33309	386 aa		4.92	□□□□□ -1.62
FYV7	YLR068W	RFC5	P38251	354 aa		4.92	□□□□□ -1.62
FYV7	YLR068W	MEF2	P39677	819 aa		4.92	□□□□□ -1.62
FYV7	YLR068W	TAD3	Q9URQ3	322 aa		4.92	□□□□□ -1.62
FYV7	YLR068W	GCR1	P07261	785 aa		4.91	□□□□□ -1.62
FYV7	YLR068W	KIN2	P13186	1147 aa	Known RBP	4.91	□□□□□ -1.62
FYV7	YLR068W	ATE1	P16639	503 aa		4.91	□□□□□ -1.62
FYV7	YLR068W	SPT20	P50875	604 aa		4.91	□□□□□ -1.62
FYV7	YLR068W	RRP15	Q06511	250 aa	Predicted RBP	4.91	□□□□□ -1.62
FYV7	YLR068W	ATG13	Q06628	738 aa		4.91	□□□□□ -1.62
FYV7	YLR068W	NOP8	Q08287	484 aa	Predicted RBP	4.91	□□□□□ -1.62
FYV7	YLR068W	RTT10	Q08924	1013 aa		4.91	□□□□□ -1.62
FYV7	YLR068W	YER152C	P10356	443 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	MCM2	P29469	868 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	MLS1	P30952	554 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	ABZ1	P37254	787 aa	Predicted RBP	4.9	□□□□□ -1.63
FYV7	YLR068W	FYV10	P40492	516 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	MPH1	P40562	993 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	YML020W	Q03722	664 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	TMA46	Q12000	345 aa	Known RBP	4.9	□□□□□ -1.63
FYV7	YLR068W	GNT1	Q12096	491 aa		4.9	□□□□□ -1.63
FYV7	YLR068W	TAT2	P38967	592 aa		4.89	□□□□□ -1.63
FYV7	YLR068W	PBP1	P53297	722 aa	Known RBP	4.89	□□□□□ -1.63
FYV7	YLR068W	SIZ1	Q04195	904 aa		4.89	□□□□□ -1.63
FYV7	YLR068W	SPR28	Q04921	423 aa		4.89	□□□□□ -1.63
FYV7	YLR068W	SVS1	Q12254	260 aa		4.89	□□□□□ -1.63
FYV7	YLR068W	CTS1	P29029	562 aa		4.88	□□□□□ -1.63
FYV7	YLR068W	DUS4	Q06063	367 aa		4.88	□□□□□ -1.63
FYV7	YLR068W	TUB2	P02557	457 aa	Known RBP	4.87	□□□□□ -1.63
FYV7	YLR068W	GAL10	P04397	699 aa		4.87	□□□□□ -1.63
FYV7	YLR068W	THS1	P04801	734 aa	Known RBP	4.87	□□□□□ -1.63
FYV7	YLR068W	BAS1	P22035	811 aa		4.87	□□□□□ -1.63
FYV7	YLR068W	RER2	P35196	286 aa		4.87	□□□□□ -1.63
FYV7	YLR068W	SHM2	P37291	469 aa	Known RBP	4.87	□□□□□ -1.63
FYV7	YLR068W	ROT1	Q03691	256 aa		4.87	□□□□□ -1.63
FYV7	YLR068W	TIF35	Q04067	274 aa	Known RBP	4.87	□□□□□ -1.63
FYV7	YLR068W	RXT3	Q07458	294 aa		4.87	□□□□□ -1.63
FYV7	YLR068W	CMP2	P14747	604 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	PEP7	P32609	515 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	MCM7	P38132	845 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
FYV7	YLR068W	RRT14	P40470	206 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	YFL054C	P43549	646 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	PLB2	Q03674	706 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	ACM1	Q08981	209 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	RIB2	Q12362	591 aa	Known RBP	4.86	□□□□□ -1.63
FYV7	YLR068W	PNS1	Q12412	539 aa		4.86	□□□□□ -1.63
FYV7	YLR068W	STE11	P23561	717 aa		4.85	□□□□□ -1.63
FYV7	YLR068W	APL1	P27351	700 aa		4.85	□□□□□ -1.63
FYV7	YLR068W	GEM1	P39722	662 aa		4.85	□□□□□ -1.63
FYV7	YLR068W	URN1	Q06525	465 aa	Known RBP	4.85	□□□□□ -1.63
FYV7	YLR068W	ACK1	Q07622	623 aa	Predicted RBP	4.85	□□□□□ -1.63
FYV7	YLR068W	ACE2	P21192	770 aa		4.84	□□□□□ -1.63
FYV7	YLR068W	SRM1	P21827	482 aa		4.84	□□□□□ -1.63
FYV7	YLR068W	CDC20	P26309	610 aa		4.84	□□□□□ -1.63
FYV7	YLR068W	GPB1	Q08886	897 aa		4.84	□□□□□ -1.63
FYV7	YLR068W	RPL11A	P0C0W9	174 aa	Known RBP	4.83	□□□□□ -1.64
FYV7	YLR068W	LYP1	P32487	611 aa		4.83	□□□□□ -1.64
FYV7	YLR068W	UGA2	P38067	497 aa		4.83	□□□□□ -1.64
FYV7	YLR068W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
FYV7	YLR068W	MSC2	Q03455	724 aa		4.83	□□□□□ -1.64
FYV7	YLR068W	RPL11B	Q3E757	174 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms