RNA–Protein interactions for RNA: YLL002W

RTT109, Transcript of Histone acetyltransferase, yeast

Gene RTT109, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT109	YLL002W	TOM1	Q03280	3268 aa		4.92	□□□□□ -1.62
RTT109	YLL002W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RTT109	YLL002W	DED1	P06634	604 aa	Known RBP	4.91	□□□□□ -1.62
RTT109	YLL002W	VMA4	P22203	233 aa	Known RBP	4.91	□□□□□ -1.62
RTT109	YLL002W	MYO4	P32492	1471 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	TOS1	P38288	455 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	PIC2	P40035	300 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	YGL140C	P53120	1219 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	CWC24	P53769	259 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	MEC3	Q02574	474 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	MED7	Q08278	222 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	ALG6	Q12001	544 aa	Known RBP	4.91	□□□□□ -1.62
RTT109	YLL002W	YOR223W	Q12015	292 aa		4.91	□□□□□ -1.62
RTT109	YLL002W	MLP2	P40457	1679 aa		4.9	□□□□□ -1.62
RTT109	YLL002W	TY3B-G	Q99315	1547 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	SNT2	P53127	1403 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	SEC23	P15303	768 aa	Known RBP	4.9	□□□□□ -1.63
RTT109	YLL002W	RAD27	P26793	382 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	LIP5	P32875	414 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	ARL1	P38116	183 aa	Known RBP	4.9	□□□□□ -1.63
RTT109	YLL002W	SEA4	P38164	1038 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	IRC24	P40580	263 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	SLS1	P42900	643 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	YNR063W	P53749	607 aa		4.9	□□□□□ -1.63
RTT109	YLL002W	TAF13	P11747	167 aa		4.89	□□□□□ -1.63
RTT109	YLL002W	MNR2	P35724	969 aa		4.89	□□□□□ -1.63
RTT109	YLL002W	SAF1	P38352	637 aa		4.89	□□□□□ -1.63
RTT109	YLL002W	DOT1	Q04089	582 aa	Known RBP	4.89	□□□□□ -1.63
RTT109	YLL002W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RTT109	YLL002W	REC8	Q12188	680 aa		4.89	□□□□□ -1.63
RTT109	YLL002W	YPR117W	Q06116	2489 aa		4.89	□□□□□ -1.63
RTT109	YLL002W	NEM1	P38757	446 aa		4.88	□□□□□ -1.63
RTT109	YLL002W	LAP2	Q10740	671 aa		4.88	□□□□□ -1.63
RTT109	YLL002W	VTH1	P40438	1549 aa		4.88	□□□□□ -1.63
RTT109	YLL002W	VTH2	P40890	1549 aa		4.88	□□□□□ -1.63
RTT109	YLL002W	YOR1	P53049	1477 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	IQG1	Q12280	1495 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	GCR1	P07261	785 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	HSE1	P38753	452 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	SPO74	P45819	413 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	ELA1	P53861	379 aa	Predicted RBP	4.87	□□□□□ -1.63
RTT109	YLL002W	UTP5	Q04177	643 aa	Known RBP	4.87	□□□□□ -1.63
RTT109	YLL002W	EST2	Q06163	884 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	HDA2	Q06629	674 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	RTT10	Q08924	1013 aa		4.87	□□□□□ -1.63
RTT109	YLL002W	CHS2	P14180	963 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	ADD66	P36040	267 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	YAR028W	P39548	234 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	VAC8	P39968	578 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	VPS16	Q03308	798 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	BRE4	Q07660	1125 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	PIN2	Q12057	282 aa		4.86	□□□□□ -1.63
RTT109	YLL002W	CDC34	P14682	295 aa		4.85	□□□□□ -1.63
RTT109	YLL002W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RTT109	YLL002W	GPT2	P36148	743 aa		4.85	□□□□□ -1.63
RTT109	YLL002W	SIW14	P53965	281 aa		4.85	□□□□□ -1.63
RTT109	YLL002W	ALD6	P54115	500 aa	Known RBP	4.85	□□□□□ -1.63
RTT109	YLL002W	ROD1	Q02805	837 aa		4.85	□□□□□ -1.63
RTT109	YLL002W	GDE1	Q02979	1223 aa		4.85	□□□□□ -1.63
RTT109	YLL002W	TMA46	Q12000	345 aa	Known RBP	4.85	□□□□□ -1.63
RTT109	YLL002W	BCK1	Q01389	1478 aa		4.85	□□□□□ -1.63
RTT109	YLL002W	HAP1	P0CE41	1502 aa		4.84	□□□□□ -1.63
RTT109	YLL002W	CYC7	P00045	113 aa		4.84	□□□□□ -1.63
RTT109	YLL002W	RDH54	P38086	958 aa		4.84	□□□□□ -1.63
RTT109	YLL002W	YGR045C	P53229	120 aa		4.84	□□□□□ -1.63
RTT109	YLL002W	NCE103	P53615	221 aa		4.84	□□□□□ -1.63
RTT109	YLL002W	HEM13	P11353	328 aa	Known RBP	4.83	□□□□□ -1.64
RTT109	YLL002W	RKM2	Q03942	479 aa		4.83	□□□□□ -1.64
RTT109	YLL002W	MAG2	Q06436	670 aa	Known RBP	4.83	□□□□□ -1.64
RTT109	YLL002W	GIC2	Q06648	383 aa		4.83	□□□□□ -1.64
RTT109	YLL002W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.83	□□□□□ -1.64
RTT109	YLL002W	TOR1	P35169	2470 aa		4.83	□□□□□ -1.64
RTT109	YLL002W	STU1	P38198	1513 aa		4.83	□□□□□ -1.64
RTT109	YLL002W	YBT1	P32386	1661 aa		4.83	□□□□□ -1.64
RTT109	YLL002W	TSC11	P40061	1430 aa		4.82	□□□□□ -1.64
RTT109	YLL002W	NFS1	P25374	497 aa		4.82	□□□□□ -1.64
RTT109	YLL002W	NNK1	P36003	928 aa		4.82	□□□□□ -1.64
RTT109	YLL002W	ENT3	P47160	408 aa		4.82	□□□□□ -1.64
RTT109	YLL002W	SDH1	Q00711	640 aa		4.82	□□□□□ -1.64
RTT109	YLL002W	PTC5	Q12511	572 aa		4.82	□□□□□ -1.64
RTT109	YLL002W	YRF1-2	P40105	1681 aa		4.81	□□□□□ -1.64
RTT109	YLL002W	SMY2	P32909	740 aa	Known RBP	4.81	□□□□□ -1.64
RTT109	YLL002W	MSH4	P40965	878 aa	Predicted RBP	4.81	□□□□□ -1.64
RTT109	YLL002W	VPS53	P47061	822 aa		4.81	□□□□□ -1.64
RTT109	YLL002W	FAA4	P47912	694 aa	Known RBP	4.81	□□□□□ -1.64
RTT109	YLL002W	SPO20	Q04359	397 aa		4.81	□□□□□ -1.64
RTT109	YLL002W	HRK1	Q08732	759 aa	Known RBP	4.81	□□□□□ -1.64
RTT109	YLL002W	FAL1	Q12099	399 aa	Known RBP	4.81	□□□□□ -1.64
RTT109	YLL002W	WRS1	Q12109	432 aa	Known RBP	4.81	□□□□□ -1.64
RTT109	YLL002W	SYP1	P25623	870 aa	Known RBP	4.8	□□□□□ -1.64
RTT109	YLL002W	MKK2	P32491	506 aa		4.8	□□□□□ -1.64
RTT109	YLL002W	ALG3	P38179	458 aa		4.8	□□□□□ -1.64
RTT109	YLL002W	KRI1	P42846	591 aa	Known RBP	4.8	□□□□□ -1.64
RTT109	YLL002W	GNP1	P48813	663 aa		4.8	□□□□□ -1.64
RTT109	YLL002W	RAT1	Q02792	1006 aa	Known RBP	4.8	□□□□□ -1.64
RTT109	YLL002W	YLR257W	Q06146	321 aa	Known RBP	4.8	□□□□□ -1.64
RTT109	YLL002W	PDR12	Q02785	1511 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	TRP2	P00899	507 aa	Known RBP	4.79	□□□□□ -1.64
RTT109	YLL002W	GCD1	P09032	578 aa	Predicted RBP	4.79	□□□□□ -1.64
RTT109	YLL002W	RPS4A	P0CX35	261 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms