RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKR040C	YKR040C	ASF1	P32447	279 aa		13.18	□□□□□ -0.3
YKR040C	YKR040C	HMF1	P40037	129 aa	Known RBP	13.18	□□□□□ -0.3
YKR040C	YKR040C	CIT3	P43635	486 aa		13.18	□□□□□ -0.3
YKR040C	YKR040C	RPS7B	P48164	190 aa	Known RBP	13.18	□□□□□ -0.3
YKR040C	YKR040C	AIM33	Q04516	312 aa		13.18	□□□□□ -0.3
YKR040C	YKR040C	YLL058W	Q12198	575 aa		13.18	□□□□□ -0.3
YKR040C	YKR040C	RTP1	Q12751	981 aa		13.18	□□□□□ -0.3
YKR040C	YKR040C	MAS2	P11914	482 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	THR4	P16120	514 aa	Known RBP	13.17	□□□□□ -0.3
YKR040C	YKR040C	UBP11	P36026	717 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	TTI1	P36097	1038 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	FLR1	P38124	548 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	YIR014W	P40570	242 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	FMP30	Q02883	468 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	VPS20	Q04272	221 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	SVF1	Q05515	481 aa		13.17	□□□□□ -0.3
YKR040C	YKR040C	TVP38	P36164	337 aa		13.16	□□□□□ -0.3
YKR040C	YKR040C	RFC5	P38251	354 aa		13.16	□□□□□ -0.3
YKR040C	YKR040C	FIR1	P40020	876 aa		13.16	□□□□□ -0.3
YKR040C	YKR040C	YFL040W	P43562	540 aa		13.16	□□□□□ -0.3
YKR040C	YKR040C	TRS120	Q04183	1289 aa		13.16	□□□□□ -0.3
YKR040C	YKR040C	SLK19	Q08581	821 aa	Known RBP	13.16	□□□□□ -0.3
YKR040C	YKR040C	CLA4	P48562	842 aa		13.15	□□□□□ -0.3
YKR040C	YKR040C	PHM6	Q05637	104 aa		13.15	□□□□□ -0.3
YKR040C	YKR040C	DCS2	Q12123	353 aa		13.15	□□□□□ -0.3
YKR040C	YKR040C	GET3	Q12154	354 aa	Known RBP	13.15	□□□□□ -0.3
YKR040C	YKR040C	TIP41	Q12199	356 aa		13.15	□□□□□ -0.3
YKR040C	YKR040C	NBL1	Q3E7Y6	73 aa		13.15	□□□□□ -0.3
YKR040C	YKR040C	ILV1	P00927	576 aa	Known RBP	13.14	□□□□□ -0.31
YKR040C	YKR040C	CPA2	P03965	1118 aa	Known RBP	13.14	□□□□□ -0.31
YKR040C	YKR040C	ESS1	P22696	170 aa		13.14	□□□□□ -0.31
YKR040C	YKR040C	WHI3	P34761	661 aa	Known RBP	13.14	□□□□□ -0.31
YKR040C	YKR040C	GAA1	P39012	614 aa		13.14	□□□□□ -0.31
YKR040C	YKR040C	CNM67	P53865	581 aa	Known RBP	13.14	□□□□□ -0.31
YKR040C	YKR040C	MFM1	Q02783	413 aa		13.14	□□□□□ -0.31
YKR040C	YKR040C	CRD1	Q07560	283 aa		13.14	□□□□□ -0.31
YKR040C	YKR040C	YPL150W	Q12152	901 aa		13.14	□□□□□ -0.31
YKR040C	YKR040C	VPS13	Q07878	3144 aa		13.14	□□□□□ -0.31
YKR040C	YKR040C	PGK1	P00560	416 aa	Known RBP	13.13	□□□□□ -0.31
YKR040C	YKR040C	HEM1	P09950	548 aa	Predicted RBP	13.13	□□□□□ -0.31
YKR040C	YKR040C	SNA3	P14359	133 aa		13.13	□□□□□ -0.31
YKR040C	YKR040C	GSY1	P23337	708 aa		13.13	□□□□□ -0.31
YKR040C	YKR040C	PGM1	P33401	570 aa	Known RBP	13.13	□□□□□ -0.31
YKR040C	YKR040C	AVT3	P36062	692 aa		13.13	□□□□□ -0.31
YKR040C	YKR040C	STT3	P39007	718 aa	Known RBP	13.13	□□□□□ -0.31
YKR040C	YKR040C	PIL1	P53252	339 aa	Known RBP	13.13	□□□□□ -0.31
YKR040C	YKR040C	ZPR1	P53303	486 aa	Known RBP	13.13	□□□□□ -0.31
YKR040C	YKR040C	MSC2	Q03455	724 aa		13.13	□□□□□ -0.31
YKR040C	YKR040C	ATG32	P40458	529 aa		13.12	□□□□□ -0.31
YKR040C	YKR040C	EIS1	Q05050	843 aa	Known RBP	13.12	□□□□□ -0.31
YKR040C	YKR040C	YOR296W	Q08748	1289 aa		13.12	□□□□□ -0.31
YKR040C	YKR040C	YDR524C-B	Q3E6R4	66 aa		13.12	□□□□□ -0.31
YKR040C	YKR040C	MIP1	P15801	1254 aa		13.11	□□□□□ -0.31
YKR040C	YKR040C	YEL025C	P39991	1188 aa		13.11	□□□□□ -0.31
YKR040C	YKR040C	GPD2	P41911	440 aa	Known RBP	13.11	□□□□□ -0.31
YKR040C	YKR040C	NPA3	P47122	385 aa		13.11	□□□□□ -0.31
YKR040C	YKR040C	ATG11	Q12527	1178 aa		13.11	□□□□□ -0.31
YKR040C	YKR040C	VPS72	Q03388	795 aa		13.1	□□□□□ -0.31
YKR040C	YKR040C	GPI13	Q07830	1017 aa		13.1	□□□□□ -0.31
YKR040C	YKR040C	PGI1	P12709	554 aa	Known RBP	13.09	□□□□□ -0.31
YKR040C	YKR040C	PRX1	P34227	261 aa	Known RBP	13.09	□□□□□ -0.31
YKR040C	YKR040C	PSP2	P50109	593 aa	Known RBP	13.09	□□□□□ -0.31
YKR040C	YKR040C	MDR1	P53258	950 aa		13.09	□□□□□ -0.31
YKR040C	YKR040C	SDA1	P53313	767 aa	Known RBP	13.09	□□□□□ -0.31
YKR040C	YKR040C	DIP5	P53388	608 aa		13.09	□□□□□ -0.31
YKR040C	YKR040C	YML020W	Q03722	664 aa		13.09	□□□□□ -0.31
YKR040C	YKR040C	TUF1	P02992	437 aa	Known RBP	13.08	□□□□□ -0.32
YKR040C	YKR040C	CLN3	P13365	580 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	KIN82	P25341	720 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	CDC48	P25694	835 aa	Known RBP	13.08	□□□□□ -0.32
YKR040C	YKR040C	SUV3	P32580	737 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	DUR3	P33413	735 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	MAL33	P38157	468 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	PEX14	P53112	341 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	RTC4	P53850	401 aa		13.08	□□□□□ -0.32
YKR040C	YKR040C	SUP45	P12385	437 aa	Known RBP	13.07	□□□□□ -0.32
YKR040C	YKR040C	AFT1	P22149	690 aa		13.07	□□□□□ -0.32
YKR040C	YKR040C	RME1	P32338	300 aa	Known RBP	13.07	□□□□□ -0.32
YKR040C	YKR040C	FAR11	P53917	953 aa		13.07	□□□□□ -0.32
YKR040C	YKR040C	YLH47	Q06493	454 aa		13.07	□□□□□ -0.32
YKR040C	YKR040C	LDB19	Q12502	818 aa		13.07	□□□□□ -0.32
YKR040C	YKR040C	PTC5	Q12511	572 aa		13.07	□□□□□ -0.32
YKR040C	YKR040C	SMC6	Q12749	1114 aa		13.07	□□□□□ -0.32
YKR040C	YKR040C	TAO3	P40468	2376 aa		13.06	□□□□□ -0.32
YKR040C	YKR040C	BIK1	P11709	440 aa		13.06	□□□□□ -0.32
YKR040C	YKR040C	ALG1	P16661	449 aa		13.06	□□□□□ -0.32
YKR040C	YKR040C	BRE2	P43132	505 aa		13.06	□□□□□ -0.32
YKR040C	YKR040C	AZR1	P50080	613 aa		13.06	□□□□□ -0.32
YKR040C	YKR040C	UBC1	P21734	215 aa	Known RBP	13.05	□□□□□ -0.32
YKR040C	YKR040C	ALD5	P40047	520 aa	Known RBP	13.05	□□□□□ -0.32
YKR040C	YKR040C	FIS1	P40515	155 aa		13.05	□□□□□ -0.32
YKR040C	YKR040C	FKS1	P38631	1876 aa	Known RBP	13.05	□□□□□ -0.32
YKR040C	YKR040C	RDS1	P25611	832 aa		13.04	□□□□□ -0.32
YKR040C	YKR040C	IRE1	P32361	1115 aa		13.04	□□□□□ -0.32
YKR040C	YKR040C	GRS1	P38088	690 aa	Known RBP	13.04	□□□□□ -0.32
YKR040C	YKR040C	SGM1	P47166	707 aa		13.04	□□□□□ -0.32
YKR040C	YKR040C	SRD1	P09007	221 aa		13.03	□□□□□ -0.32
YKR040C	YKR040C	PCT1	P13259	424 aa		13.03	□□□□□ -0.32
YKR040C	YKR040C	RGP1	P16664	663 aa		13.03	□□□□□ -0.32
YKR040C	YKR040C	YGR153W	P48238	217 aa		13.03	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms