RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	NIT1	P40447	199 aa		4.2	□□□□□ -1.74
SPE1	YKL184W	ENV11	P53246	860 aa		4.2	□□□□□ -1.74
SPE1	YKL184W	RAT1	Q02792	1006 aa	Known RBP	4.2	□□□□□ -1.74
SPE1	YKL184W	RSC58	Q07979	502 aa		4.2	□□□□□ -1.74
SPE1	YKL184W	LPX1	Q12405	387 aa	Known RBP	4.2	□□□□□ -1.74
SPE1	YKL184W	GAS1	P22146	559 aa	Known RBP	4.19	□□□□□ -1.74
SPE1	YKL184W	RPN3	P40016	523 aa	Known RBP	4.19	□□□□□ -1.74
SPE1	YKL184W	CNN1	P43618	361 aa		4.19	□□□□□ -1.74
SPE1	YKL184W	MNR2	P35724	969 aa		4.18	□□□□□ -1.74
SPE1	YKL184W	RNQ1	P25367	405 aa		4.17	□□□□□ -1.74
SPE1	YKL184W	MLS1	P30952	554 aa		4.17	□□□□□ -1.74
SPE1	YKL184W	PIK1	P39104	1066 aa		4.17	□□□□□ -1.74
SPE1	YKL184W	UBP5	P39944	805 aa		4.17	□□□□□ -1.74
SPE1	YKL184W	SNO2	P53823	222 aa		4.17	□□□□□ -1.74
SPE1	YKL184W	DBP5	P20449	482 aa	Known RBP	4.16	□□□□□ -1.74
SPE1	YKL184W	BAP2	P38084	609 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	MCM7	P38132	845 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	ETP1	P38748	585 aa	Known RBP	4.16	□□□□□ -1.74
SPE1	YKL184W	HXT13	P39924	564 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	SNF7	P39929	240 aa	Known RBP	4.16	□□□□□ -1.74
SPE1	YKL184W	SEC26	P41810	973 aa	Known RBP	4.16	□□□□□ -1.74
SPE1	YKL184W	GNP1	P48813	663 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	HNT2	P49775	206 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	HXT17	P53631	564 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	MRPL22	P53881	309 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	HXT15	P54854	567 aa		4.16	□□□□□ -1.74
SPE1	YKL184W	CLN2	P20438	545 aa		4.15	□□□□□ -1.74
SPE1	YKL184W	RER2	P35196	286 aa		4.15	□□□□□ -1.74
SPE1	YKL184W	KRI1	P42846	591 aa	Known RBP	4.15	□□□□□ -1.74
SPE1	YKL184W	CDC34	P14682	295 aa		4.14	□□□□□ -1.75
SPE1	YKL184W	RSM24	Q03976	319 aa		4.14	□□□□□ -1.75
SPE1	YKL184W	TIF35	Q04067	274 aa	Known RBP	4.14	□□□□□ -1.75
SPE1	YKL184W	SPO20	Q04359	397 aa		4.14	□□□□□ -1.75
SPE1	YKL184W	SVF1	Q05515	481 aa		4.14	□□□□□ -1.75
SPE1	YKL184W	RCL1	Q08096	367 aa	Predicted RBP	4.14	□□□□□ -1.75
SPE1	YKL184W	RFC5	P38251	354 aa		4.13	□□□□□ -1.75
SPE1	YKL184W	MAD1	P40957	749 aa		4.13	□□□□□ -1.75
SPE1	YKL184W	TYW3	P53177	273 aa		4.13	□□□□□ -1.75
SPE1	YKL184W	GNT1	Q12096	491 aa		4.13	□□□□□ -1.75
SPE1	YKL184W	YER152C	P10356	443 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	LYP1	P32487	611 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	MPH1	P40562	993 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	SNU71	P53207	620 aa	Known RBP	4.12	□□□□□ -1.75
SPE1	YKL184W	CWC24	P53769	259 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	SPP382	Q06411	708 aa	Predicted RBP	4.12	□□□□□ -1.75
SPE1	YKL184W	TRP2	P00899	507 aa	Known RBP	4.12	□□□□□ -1.75
SPE1	YKL184W	THS1	P04801	734 aa	Known RBP	4.12	□□□□□ -1.75
SPE1	YKL184W	KIN2	P13186	1147 aa	Known RBP	4.12	□□□□□ -1.75
SPE1	YKL184W	SNF5	P18480	905 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	MET10	P39692	1035 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	CDA2	Q06703	312 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	SVS1	Q12254	260 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	YDL177C	Q12257	170 aa		4.12	□□□□□ -1.75
SPE1	YKL184W	BAS1	P22035	811 aa		4.11	□□□□□ -1.75
SPE1	YKL184W	TSA1	P34760	196 aa	Known RBP	4.11	□□□□□ -1.75
SPE1	YKL184W	AIM3	P38266	947 aa	Known RBP	4.11	□□□□□ -1.75
SPE1	YKL184W	GEM1	P39722	662 aa		4.11	□□□□□ -1.75
SPE1	YKL184W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SPE1	YKL184W	RKM4	Q12504	494 aa		4.11	□□□□□ -1.75
SPE1	YKL184W	CYC1	P00044	109 aa	Predicted RBP	4.1	□□□□□ -1.75
SPE1	YKL184W	INO1	P11986	533 aa		4.1	□□□□□ -1.75
SPE1	YKL184W	PRP6	P19735	899 aa	Predicted RBP	4.1	□□□□□ -1.75
SPE1	YKL184W	YKL107W	P34251	309 aa		4.1	□□□□□ -1.75
SPE1	YKL184W	RIM8	P53179	542 aa		4.1	□□□□□ -1.75
SPE1	YKL184W	GDE1	Q02979	1223 aa		4.1	□□□□□ -1.75
SPE1	YKL184W	SGD1	Q06132	899 aa		4.1	□□□□□ -1.75
SPE1	YKL184W	JIP5	Q06214	492 aa	Predicted RBP	4.1	□□□□□ -1.75
SPE1	YKL184W	ACM1	Q08981	209 aa		4.1	□□□□□ -1.75
SPE1	YKL184W	SOD2	P00447	233 aa		4.09	□□□□□ -1.75
SPE1	YKL184W	RPS13	P05756	151 aa	Known RBP	4.09	□□□□□ -1.75
SPE1	YKL184W	RPL11A	P0C0W9	174 aa	Known RBP	4.09	□□□□□ -1.75
SPE1	YKL184W	APL1	P27351	700 aa		4.09	□□□□□ -1.75
SPE1	YKL184W	DUT1	P33317	147 aa		4.09	□□□□□ -1.75
SPE1	YKL184W	MOT2	P34909	587 aa	Known RBP	4.09	□□□□□ -1.75
SPE1	YKL184W	UGA2	P38067	497 aa		4.09	□□□□□ -1.75
SPE1	YKL184W	MXR1	P40029	184 aa		4.09	□□□□□ -1.75
SPE1	YKL184W	RPL11B	Q3E757	174 aa	Predicted RBP	4.09	□□□□□ -1.75
SPE1	YKL184W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SPE1	YKL184W	YGL176C	P46945	554 aa		4.08	□□□□□ -1.76
SPE1	YKL184W	YGR053C	P53234	283 aa		4.08	□□□□□ -1.76
SPE1	YKL184W	PBP1	P53297	722 aa	Known RBP	4.08	□□□□□ -1.76
SPE1	YKL184W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip
SPE1	YKL184W	EEB1	Q02891	456 aa		4.08	□□□□□ -1.76
SPE1	YKL184W	CMP2	P14747	604 aa		4.07	□□□□□ -1.76
SPE1	YKL184W	LAM1	P38851	1228 aa		4.07	□□□□□ -1.76
SPE1	YKL184W	RRT14	P40470	206 aa		4.07	□□□□□ -1.76
SPE1	YKL184W	YFL054C	P43549	646 aa		4.07	□□□□□ -1.76
SPE1	YKL184W	YLR225C	Q05948	407 aa	Known RBP	4.07	□□□□□ -1.76
SPE1	YKL184W	ATG13	Q06628	738 aa		4.07	□□□□□ -1.76
SPE1	YKL184W	YPL277C	Q08989	487 aa		4.07	□□□□□ -1.76
SPE1	YKL184W	TOD6	P34219	525 aa		4.06	□□□□□ -1.76
SPE1	YKL184W	YKL222C	P35995	705 aa		4.06	□□□□□ -1.76
SPE1	YKL184W	PNT1	P38969	423 aa		4.06	□□□□□ -1.76
SPE1	YKL184W	MEF2	P39677	819 aa		4.06	□□□□□ -1.76
SPE1	YKL184W	FAA4	P47912	694 aa	Known RBP	4.06	□□□□□ -1.76
SPE1	YKL184W	ROT1	Q03691	256 aa		4.06	□□□□□ -1.76
SPE1	YKL184W	PIN2	Q12057	282 aa		4.06	□□□□□ -1.76
SPE1	YKL184W	FAL1	Q12099	399 aa	Known RBP	4.06	□□□□□ -1.76
SPE1	YKL184W	YLR358C	O13565	187 aa		4.05	□□□□□ -1.76
SPE1	YKL184W	SPT20	P50875	604 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 84.8 ms