RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W TAF13P11747 167 aa5.09□□□□□ -1.59
VMA5YKL080W RAD27P26793 382 aa5.09□□□□□ -1.59
VMA5YKL080W MLS1P30952 554 aa5.09□□□□□ -1.59
VMA5YKL080W HXT13P39924 564 aa5.09□□□□□ -1.59
VMA5YKL080W HXT17P53631 564 aa5.09□□□□□ -1.59
VMA5YKL080W HXT15P54854 567 aa5.09□□□□□ -1.59
VMA5YKL080W HOS3Q02959 697 aaKnown RBP5.09□□□□□ -1.59
VMA5YKL080W COQ4O13525 335 aa5.08□□□□□ -1.6
VMA5YKL080W SYP1P25623 870 aaKnown RBP5.08□□□□□ -1.6
VMA5YKL080W RSC58Q07979 502 aa5.08□□□□□ -1.6
VMA5YKL080W YFL054CP43549 646 aa5.07□□□□□ -1.6
VMA5YKL080W GNP1P48813 663 aa5.07□□□□□ -1.6
VMA5YKL080W RIM8P53179 542 aa5.07□□□□□ -1.6
VMA5YKL080W TNA1P53322 534 aa5.07□□□□□ -1.6
VMA5YKL080W NBA1Q08229 501 aaKnown RBP5.07□□□□□ -1.6
VMA5YKL080W RSB1Q08417 382 aa5.07□□□□□ -1.6
VMA5YKL080W YPL277CQ08989 487 aa5.07□□□□□ -1.6
VMA5YKL080W SPS1P08458 490 aa5.06□□□□□ -1.6
VMA5YKL080W SRO9P25567 434 aaKnown RBP5.06□□□□□ -1.6
VMA5YKL080W PET112P33893 541 aa5.06□□□□□ -1.6
VMA5YKL080W RER2P35196 286 aa5.06□□□□□ -1.6
VMA5YKL080W MCM7P38132 845 aa5.06□□□□□ -1.6
VMA5YKL080W RTT10Q08924 1013 aa5.06□□□□□ -1.6
VMA5YKL080W YPL260WQ08977 551 aa5.06□□□□□ -1.6
VMA5YKL080W YER152CP10356 443 aa5.05□□□□□ -1.6
VMA5YKL080W PUF4P25339 888 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
VMA5YKL080W TOD6P34219 525 aa5.05□□□□□ -1.6
VMA5YKL080W CCZ1P38273 704 aa5.05□□□□□ -1.6
VMA5YKL080W SOD2P00447 233 aa5.04□□□□□ -1.6
VMA5YKL080W CNN1P43618 361 aa5.04□□□□□ -1.6
VMA5YKL080W DBP5P20449 482 aaKnown RBP5.03□□□□□ -1.6
VMA5YKL080W MOT2P34909 587 aaKnown RBP5.03□□□□□ -1.6
VMA5YKL080W RGD1P38339 666 aa5.03□□□□□ -1.6
VMA5YKL080W RMD1Q03441 430 aa5.03□□□□□ -1.6
VMA5YKL080W TIF35Q04067 274 aaKnown RBP5.03□□□□□ -1.6
VMA5YKL080W ENT3P47160 408 aa5.02□□□□□ -1.61
VMA5YKL080W TMA46Q12000 345 aaKnown RBP5.02□□□□□ -1.61
VMA5YKL080W RPS13P05756 151 aaKnown RBP5.01□□□□□ -1.61
VMA5YKL080W SNF5P18480 905 aa5.01□□□□□ -1.61
VMA5YKL080W BAP2P38084 609 aa5.01□□□□□ -1.61
VMA5YKL080W PIK1P39104 1066 aa5.01□□□□□ -1.61
VMA5YKL080W RPN3P40016 523 aaKnown RBP5.01□□□□□ -1.61
VMA5YKL080W MXR1P40029 184 aa5.01□□□□□ -1.61
VMA5YKL080W YOR352WQ08816 343 aa5.01□□□□□ -1.61
VMA5YKL080W DUT1P33317 147 aa5□□□□□ -1.61
VMA5YKL080W MPH1P40562 993 aa5□□□□□ -1.61
VMA5YKL080W MAP1Q01662 387 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VMA5YKL080W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VMA5YKL080W TRP2P00899 507 aaKnown RBP4.99□□□□□ -1.61
VMA5YKL080W CDC34P14682 295 aa4.99□□□□□ -1.61
VMA5YKL080W SEC26P41810 973 aaKnown RBP4.99□□□□□ -1.61
VMA5YKL080W TYW3P53177 273 aa4.99□□□□□ -1.61
VMA5YKL080W SNO2P53823 222 aa4.99□□□□□ -1.61
VMA5YKL080W EEB1Q02891 456 aa4.99□□□□□ -1.61
VMA5YKL080W CLU1Q03690 1277 aaKnown RBP4.99□□□□□ -1.61
VMA5YKL080W CYC1P00044 109 aaPredicted RBP4.98□□□□□ -1.61
VMA5YKL080W INO1P11986 533 aa4.98□□□□□ -1.61
VMA5YKL080W LYP1P32487 611 aa4.98□□□□□ -1.61
VMA5YKL080W ABZ1P37254 787 aaPredicted RBP4.98□□□□□ -1.61
VMA5YKL080W HNT2P49775 206 aa4.98□□□□□ -1.61
VMA5YKL080W CWC24P53769 259 aa4.98□□□□□ -1.61
VMA5YKL080W ROT1Q03691 256 aa4.98□□□□□ -1.61
VMA5YKL080W YLR225CQ05948 407 aaKnown RBP4.98□□□□□ -1.61
VMA5YKL080W JIP5Q06214 492 aaPredicted RBP4.98□□□□□ -1.61
VMA5YKL080W PRE10P21242 288 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61 RIP-Chip
VMA5YKL080W BAS1P22035 811 aa4.97□□□□□ -1.61
VMA5YKL080W DBP2P24783 546 aaKnown RBP4.97□□□□□ -1.61
VMA5YKL080W RFC5P38251 354 aa4.97□□□□□ -1.61
VMA5YKL080W GDE1Q02979 1223 aa4.97□□□□□ -1.61
VMA5YKL080W YDR132CQ03900 495 aa4.97□□□□□ -1.61
VMA5YKL080W SPP382Q06411 708 aaPredicted RBP4.97□□□□□ -1.61
VMA5YKL080W SVS1Q12254 260 aa4.97□□□□□ -1.61
VMA5YKL080W RPL11AP0C0W9 174 aaKnown RBP4.96□□□□□ -1.62
VMA5YKL080W CMP2P14747 604 aa4.96□□□□□ -1.62
VMA5YKL080W MNR2P35724 969 aa4.96□□□□□ -1.62
VMA5YKL080W SHM2P37291 469 aaKnown RBP4.96□□□□□ -1.62
VMA5YKL080W UGA2P38067 497 aa4.96□□□□□ -1.62
VMA5YKL080W MAD1P40957 749 aa4.96□□□□□ -1.62
VMA5YKL080W YGL176CP46945 554 aa4.96□□□□□ -1.62
VMA5YKL080W FAA4P47912 694 aaKnown RBP4.96□□□□□ -1.62
VMA5YKL080W GIS1Q03833 894 aa4.96□□□□□ -1.62
VMA5YKL080W RSM24Q03976 319 aa4.96□□□□□ -1.62
VMA5YKL080W GNT1Q12096 491 aa4.96□□□□□ -1.62
VMA5YKL080W RPL11BQ3E757 174 aaPredicted RBP4.96□□□□□ -1.62
VMA5YKL080W APL1P27351 700 aa4.95□□□□□ -1.62
VMA5YKL080W CTS1P29029 562 aa4.95□□□□□ -1.62
VMA5YKL080W ESC2Q06340 456 aa4.95□□□□□ -1.62
VMA5YKL080W MET10P39692 1035 aa4.94□□□□□ -1.62
VMA5YKL080W SPO20Q04359 397 aa4.94□□□□□ -1.62
VMA5YKL080W SGD1Q06132 899 aa4.94□□□□□ -1.62
VMA5YKL080W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
VMA5YKL080W YPL066WQ12194 479 aa4.94□□□□□ -1.62
VMA5YKL080W GAL10P04397 699 aa4.93□□□□□ -1.62
VMA5YKL080W ABD1P32783 436 aaPredicted RBP4.93□□□□□ -1.62
VMA5YKL080W YKL107WP34251 309 aa4.93□□□□□ -1.62
VMA5YKL080W LAM1P38851 1228 aa4.93□□□□□ -1.62
VMA5YKL080W SPT20P50875 604 aa4.93□□□□□ -1.62
VMA5YKL080W PLB2Q03674 706 aa4.93□□□□□ -1.62
VMA5YKL080W ACM1Q08981 209 aa4.93□□□□□ -1.62
VMA5YKL080W YLR358CO13565 187 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms