RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W LSO2Q3E772 92 aaKnown RBP3.83□□□□□ -1.8
NSP1YJL041W SNQ2P32568 1501 aaKnown RBP3.83□□□□□ -1.8
NSP1YJL041W FAR1P21268 830 aa3.83□□□□□ -1.8
NSP1YJL041W OPI1P21957 404 aa3.83□□□□□ -1.8
NSP1YJL041W RPC34P32910 317 aa3.83□□□□□ -1.8
NSP1YJL041W SEG2P34250 1132 aa3.83□□□□□ -1.8
NSP1YJL041W MIC60P36112 540 aa3.83□□□□□ -1.8
NSP1YJL041W SMC2P38989 1170 aaKnown RBP3.83□□□□□ -1.8
NSP1YJL041W UTP18P40362 594 aaPredicted RBP3.83□□□□□ -1.8
NSP1YJL041W ILM1P47155 203 aa3.83□□□□□ -1.8
NSP1YJL041W HST1P53685 503 aa3.83□□□□□ -1.8
NSP1YJL041W PGA2P53903 129 aa3.83□□□□□ -1.8
NSP1YJL041W KRE33P53914 1056 aaKnown RBP3.83□□□□□ -1.8
NSP1YJL041W APP1P53933 587 aa3.83□□□□□ -1.8
NSP1YJL041W DNM1P54861 757 aa3.83□□□□□ -1.8
NSP1YJL041W YPL062WQ02781 134 aa3.83□□□□□ -1.8
NSP1YJL041W KRE28Q04431 385 aa3.83□□□□□ -1.8
NSP1YJL041W RSC2Q06488 889 aa3.83□□□□□ -1.8
NSP1YJL041W CLP1Q08685 445 aaPredicted RBP3.83□□□□□ -1.8
NSP1YJL041W RTC5Q12108 567 aaKnown RBP3.83□□□□□ -1.8
NSP1YJL041W ATG9Q12142 997 aa3.83□□□□□ -1.8
NSP1YJL041W RIO1Q12196 484 aaKnown RBP3.83□□□□□ -1.8
NSP1YJL041W SIR4P11978 1358 aa3.83□□□□□ -1.8
NSP1YJL041W CDC25P04821 1589 aa3.82□□□□□ -1.8
NSP1YJL041W KSS1P14681 368 aa3.82□□□□□ -1.8
NSP1YJL041W MER1P16523 270 aa3.82□□□□□ -1.8
NSP1YJL041W PUP2P32379 260 aa3.82□□□□□ -1.8
NSP1YJL041W ERC1P38767 581 aa3.82□□□□□ -1.8
NSP1YJL041W FTR1P40088 404 aa3.82□□□□□ -1.8
NSP1YJL041W PHB1P40961 287 aa3.82□□□□□ -1.8
NSP1YJL041W THI12P42883 340 aa3.82□□□□□ -1.8
NSP1YJL041W THI5P43534 340 aa3.82□□□□□ -1.8
NSP1YJL041W GCN20P43535 752 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W POL32P47110 350 aa3.82□□□□□ -1.8
NSP1YJL041W THI11P47183 340 aa3.82□□□□□ -1.8
NSP1YJL041W ORM1P53224 222 aa3.82□□□□□ -1.8
NSP1YJL041W PAP2P53632 584 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W UFD2P54860 961 aa3.82□□□□□ -1.8
NSP1YJL041W YML119WQ03208 357 aa3.82□□□□□ -1.8
NSP1YJL041W CWC21Q03375 135 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W GIR2Q03768 265 aaPredicted RBP3.82□□□□□ -1.8
NSP1YJL041W THI13Q07748 340 aa3.82□□□□□ -1.8
NSP1YJL041W SMC6Q12749 1114 aa3.82□□□□□ -1.8
NSP1YJL041W RTC1Q08281 1341 aa3.82□□□□□ -1.8
NSP1YJL041W BNR1P40450 1375 aa3.82□□□□□ -1.8
NSP1YJL041W YCF1P39109 1515 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W SUI3P09064 285 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W PET122P10355 254 aa3.82□□□□□ -1.8
NSP1YJL041W SEN2P16658 377 aa3.82□□□□□ -1.8
NSP1YJL041W PUF4P25339 888 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
NSP1YJL041W PPH3P32345 308 aa3.82□□□□□ -1.8
NSP1YJL041W SMY1P32364 656 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W SEC6P32844 805 aa3.82□□□□□ -1.8
NSP1YJL041W SCD5P34758 872 aa3.82□□□□□ -1.8
NSP1YJL041W CPR5P35176 225 aa3.82□□□□□ -1.8
NSP1YJL041W YKL063CP35725 167 aa3.82□□□□□ -1.8
NSP1YJL041W NUP120P35729 1037 aa3.82□□□□□ -1.8
NSP1YJL041W LHS1P36016 881 aa3.82□□□□□ -1.8
NSP1YJL041W YBL086CP38177 466 aa3.82□□□□□ -1.8
NSP1YJL041W PSY4P38193 441 aa3.82□□□□□ -1.8
NSP1YJL041W YBR287WP38355 427 aa3.82□□□□□ -1.8
NSP1YJL041W BEM4P39011 633 aa3.82□□□□□ -1.8
NSP1YJL041W YHB1P39676 399 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W RSM25P40496 264 aa3.82□□□□□ -1.8
NSP1YJL041W INP52P50942 1183 aa3.82□□□□□ -1.8
NSP1YJL041W RSM28Q03430 361 aa3.82□□□□□ -1.8
NSP1YJL041W RNH1Q04740 348 aa3.82□□□□□ -1.8
NSP1YJL041W LCB5Q06147 687 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W BRE1Q07457 700 aaKnown RBP3.82□□□□□ -1.8
NSP1YJL041W PSK2Q08217 1101 aa3.82□□□□□ -1.8
NSP1YJL041W WTM2Q12206 467 aa3.82□□□□□ -1.8
NSP1YJL041W CEX1Q12453 761 aa3.82□□□□□ -1.8
NSP1YJL041W HAP1P0CE41 1502 aa3.82□□□□□ -1.8
NSP1YJL041W REP1P03871 373 aa3.81□□□□□ -1.8
NSP1YJL041W CYC8P14922 966 aa3.81□□□□□ -1.8
NSP1YJL041W MCM3P24279 971 aaKnown RBP3.81□□□□□ -1.8
NSP1YJL041W NIP100P33420 868 aa3.81□□□□□ -1.8
NSP1YJL041W PAM1P37304 830 aaKnown RBP3.81□□□□□ -1.8
NSP1YJL041W ERP2P39704 215 aa3.81□□□□□ -1.8
NSP1YJL041W ZDS1P50111 915 aaKnown RBP3.81□□□□□ -1.8
NSP1YJL041W MAL13P53338 473 aa3.81□□□□□ -1.8
NSP1YJL041W ARO80Q04052 950 aa3.81□□□□□ -1.8
NSP1YJL041W YDR444WQ04093 687 aa3.81□□□□□ -1.8
NSP1YJL041W YOR352WQ08816 343 aa3.81□□□□□ -1.8
NSP1YJL041W YDL176WQ12027 708 aa3.81□□□□□ -1.8
NSP1YJL041W SLP1Q12232 587 aa3.81□□□□□ -1.8
NSP1YJL041W YMR085WP0CF18 432 aa3.81□□□□□ -1.8
NSP1YJL041W YJU2P28320 278 aaPredicted RBP3.81□□□□□ -1.8
NSP1YJL041W ITR2P30606 609 aa3.81□□□□□ -1.8
NSP1YJL041W RPN12P32496 274 aa3.81□□□□□ -1.8
NSP1YJL041W EFM2P38347 419 aa3.81□□□□□ -1.8
NSP1YJL041W ESF2P53743 316 aaKnown RBP3.81□□□□□ -1.8
NSP1YJL041W NCS2P53923 493 aaPredicted RBP3.81□□□□□ -1.8
NSP1YJL041W HEH2Q03281 663 aa3.81□□□□□ -1.8
NSP1YJL041W TRS120Q04183 1289 aa3.81□□□□□ -1.8
NSP1YJL041W DFG5Q05031 458 aa3.81□□□□□ -1.8
NSP1YJL041W NUT2Q06213 157 aa3.81□□□□□ -1.8
NSP1YJL041W RKM1Q08961 583 aaPredicted RBP3.81□□□□□ -1.8
NSP1YJL041W PDR15Q04182 1529 aaKnown RBP3.8□□□□□ -1.8
NSP1YJL041W SUI2P20459 304 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms