RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YVC1Q12324 675 aa3.87□□□□□ -1.79
YIR040CYIR040C DED1P06634 604 aaKnown RBP3.86□□□□□ -1.79
YIR040CYIR040C GCR1P07261 785 aa3.86□□□□□ -1.79
YIR040CYIR040C CBF5P33322 483 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YIR040CYIR040C BLI1P35727 113 aa3.86□□□□□ -1.79
YIR040CYIR040C SPC42P36094 363 aa3.86□□□□□ -1.79
YIR040CYIR040C NPR3P38742 1146 aa3.86□□□□□ -1.79
YIR040CYIR040C HXT13P39924 564 aa3.86□□□□□ -1.79
YIR040CYIR040C PEA2P40091 420 aa3.86□□□□□ -1.79
YIR040CYIR040C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YIR040CYIR040C HXT17P53631 564 aa3.86□□□□□ -1.79
YIR040CYIR040C HXT15P54854 567 aa3.86□□□□□ -1.79
YIR040CYIR040C MEH1Q02205 184 aa3.86□□□□□ -1.79
YIR040CYIR040C ROD1Q02805 837 aa3.86□□□□□ -1.79
YIR040CYIR040C GIR2Q03768 265 aaPredicted RBP3.86□□□□□ -1.79
YIR040CYIR040C TAF13P11747 167 aa3.85□□□□□ -1.79
YIR040CYIR040C PEP7P32609 515 aa3.85□□□□□ -1.79
YIR040CYIR040C LIP5P32875 414 aa3.85□□□□□ -1.79
YIR040CYIR040C PEX7P39108 375 aa3.85□□□□□ -1.79
YIR040CYIR040C VPS27P40343 622 aaKnown RBP3.85□□□□□ -1.79
YIR040CYIR040C SEC27P41811 889 aaKnown RBP3.85□□□□□ -1.79
YIR040CYIR040C VPS4P52917 437 aa3.85□□□□□ -1.79
YIR040CYIR040C NNF2P53253 936 aa3.85□□□□□ -1.79
YIR040CYIR040C RCF1Q03713 159 aa3.85□□□□□ -1.79
YIR040CYIR040C TPP1Q03796 238 aa3.85□□□□□ -1.79
YIR040CYIR040C RKM2Q03942 479 aa3.85□□□□□ -1.79
YIR040CYIR040C YDR341CQ05506 607 aaKnown RBP3.85□□□□□ -1.79
YIR040CYIR040C TOM20P35180 183 aa3.84□□□□□ -1.79
YIR040CYIR040C QNS1P38795 714 aaKnown RBP3.84□□□□□ -1.79
YIR040CYIR040C YJL045WP47052 634 aa3.84□□□□□ -1.79
YIR040CYIR040C TAN1P53072 289 aaPredicted RBP3.84□□□□□ -1.79
YIR040CYIR040C ESF1Q06344 628 aaKnown RBP3.84□□□□□ -1.79
YIR040CYIR040C MRL1Q06815 381 aa3.84□□□□□ -1.79
YIR040CYIR040C YOR059CQ08448 450 aaKnown RBP3.84□□□□□ -1.79
YIR040CYIR040C CFT2Q12102 859 aaPredicted RBP3.84□□□□□ -1.79
YIR040CYIR040C NOP58Q12499 511 aaKnown RBP3.84□□□□□ -1.79
YIR040CYIR040C GAL11P19659 1081 aa3.83□□□□□ -1.8
YIR040CYIR040C MKK2P32491 506 aa3.83□□□□□ -1.8
YIR040CYIR040C ATG14P38270 344 aa3.83□□□□□ -1.8
YIR040CYIR040C YMR124WP39523 943 aaKnown RBP3.83□□□□□ -1.8
YIR040CYIR040C ERP2P39704 215 aa3.83□□□□□ -1.8
YIR040CYIR040C ESF2P53743 316 aaKnown RBP3.83□□□□□ -1.8
YIR040CYIR040C SIW14P53965 281 aa3.83□□□□□ -1.8
YIR040CYIR040C RAT1Q02792 1006 aaKnown RBP3.83□□□□□ -1.8
YIR040CYIR040C SSY1Q03770 852 aa3.83□□□□□ -1.8
YIR040CYIR040C TMA64Q04600 565 aaKnown RBP3.83□□□□□ -1.8
YIR040CYIR040C TRE1Q08919 783 aa3.83□□□□□ -1.8
YIR040CYIR040C LAP2Q10740 671 aa3.83□□□□□ -1.8
YIR040CYIR040C SAM35P14693 329 aa3.82□□□□□ -1.8
YIR040CYIR040C DUT1P33317 147 aa3.82□□□□□ -1.8
YIR040CYIR040C ALG3P38179 458 aa3.82□□□□□ -1.8
YIR040CYIR040C HSE1P38753 452 aa3.82□□□□□ -1.8
YIR040CYIR040C DJP1P40564 432 aa3.82□□□□□ -1.8
YIR040CYIR040C GRX3Q03835 250 aa3.82□□□□□ -1.8
YIR040CYIR040C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
YIR040CYIR040C PTC5Q12511 572 aa3.82□□□□□ -1.8
YIR040CYIR040C DAL5P15365 543 aa3.81□□□□□ -1.8
YIR040CYIR040C KIP1P28742 1111 aa3.81□□□□□ -1.8
YIR040CYIR040C PRO1P32264 428 aa3.81□□□□□ -1.8
YIR040CYIR040C LRG1P35688 1017 aa3.81□□□□□ -1.8
YIR040CYIR040C PTC7P38797 343 aa3.81□□□□□ -1.8
YIR040CYIR040C GPB2P39717 880 aa3.81□□□□□ -1.8
YIR040CYIR040C GTS1P40956 396 aa3.81□□□□□ -1.8
YIR040CYIR040C VPS53P47061 822 aa3.81□□□□□ -1.8
YIR040CYIR040C HUL5P53119 910 aa3.81□□□□□ -1.8
YIR040CYIR040C RMD1Q03441 430 aa3.81□□□□□ -1.8
YIR040CYIR040C LPX1Q12405 387 aaKnown RBP3.81□□□□□ -1.8
YIR040CYIR040C NSI1Q12457 570 aa3.81□□□□□ -1.8
YIR040CYIR040C SEC3P33332 1336 aaKnown RBP3.8□□□□□ -1.8
YIR040CYIR040C HSP78P33416 811 aa3.8□□□□□ -1.8
YIR040CYIR040C RRP14P36080 434 aaKnown RBP3.8□□□□□ -1.8
YIR040CYIR040C PKH1Q03407 766 aa3.8□□□□□ -1.8
YIR040CYIR040C UBX5Q06682 500 aa3.8□□□□□ -1.8
YIR040CYIR040C IMH1Q06704 911 aaKnown RBP3.8□□□□□ -1.8
YIR040CYIR040C RCL1Q08096 367 aaPredicted RBP3.8□□□□□ -1.8
YIR040CYIR040C PSK2Q08217 1101 aa3.8□□□□□ -1.8
YIR040CYIR040C HRK1Q08732 759 aaKnown RBP3.8□□□□□ -1.8
YIR040CYIR040C OPI1P21957 404 aa3.79□□□□□ -1.8
YIR040CYIR040C MSM1P22438 575 aa3.79□□□□□ -1.8
YIR040CYIR040C ADP1P25371 1049 aa3.79□□□□□ -1.8
YIR040CYIR040C YSC84P32793 468 aa3.79□□□□□ -1.8
YIR040CYIR040C LTV1P34078 463 aa3.79□□□□□ -1.8
YIR040CYIR040C RER2P35196 286 aa3.79□□□□□ -1.8
YIR040CYIR040C POL12P38121 705 aaPredicted RBP3.79□□□□□ -1.8
YIR040CYIR040C YHL012WP38709 493 aa3.79□□□□□ -1.8
YIR040CYIR040C ENT3P47160 408 aa3.79□□□□□ -1.8
YIR040CYIR040C RIA1P53893 1110 aa3.79□□□□□ -1.8
YIR040CYIR040C RTT10Q08924 1013 aa3.79□□□□□ -1.8
YIR040CYIR040C SAC3P46674 1301 aa3.78□□□□□ -1.8
YIR040CYIR040C CDC34P14682 295 aa3.78□□□□□ -1.8
YIR040CYIR040C RAD51P25454 400 aa3.78□□□□□ -1.8
YIR040CYIR040C SYP1P25623 870 aaKnown RBP3.78□□□□□ -1.8
YIR040CYIR040C DPB3P27344 201 aa3.78□□□□□ -1.8
YIR040CYIR040C PET112P33893 541 aa3.78□□□□□ -1.8
YIR040CYIR040C MPE1P35728 441 aaKnown RBP3.78□□□□□ -1.8
YIR040CYIR040C YFL054CP43549 646 aa3.78□□□□□ -1.8
YIR040CYIR040C VID30P53076 958 aa3.78□□□□□ -1.8
YIR040CYIR040C HOS2P53096 452 aaPredicted RBP3.78□□□□□ -1.8
YIR040CYIR040C EEB1Q02891 456 aa3.78□□□□□ -1.8
YIR040CYIR040C COG8Q04632 607 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms