RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeastyeast

Gene SKI6, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI6YGR195W ZDS1P50111 915 aaKnown RBP6.59□□□□□ -1.35
SKI6YGR195W ALT1P52893 592 aa6.59□□□□□ -1.35
SKI6YGR195W ESF1Q06344 628 aaKnown RBP6.59□□□□□ -1.35
SKI6YGR195W AVO1Q08236 1176 aa6.59□□□□□ -1.35
SKI6YGR195W TAF13P11747 167 aa6.58□□□□□ -1.36
SKI6YGR195W PEP7P32609 515 aa6.58□□□□□ -1.36
SKI6YGR195W ELA1P53861 379 aaPredicted RBP6.58□□□□□ -1.36
SKI6YGR195W WRS1Q12109 432 aaKnown RBP6.58□□□□□ -1.36
SKI6YGR195W YVC1Q12324 675 aa6.58□□□□□ -1.36
SKI6YGR195W YOR131CQ12486 218 aa6.58□□□□□ -1.36
SKI6YGR195W STI1P15705 589 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
SKI6YGR195W PTC7P38797 343 aa6.57□□□□□ -1.36
SKI6YGR195W PEX7P39108 375 aa6.57□□□□□ -1.36
SKI6YGR195W XKS1P42826 600 aa6.57□□□□□ -1.36
SKI6YGR195W IOC3P43596 787 aa6.57□□□□□ -1.36
SKI6YGR195W ALD6P54115 500 aaKnown RBP6.57□□□□□ -1.36
SKI6YGR195W NSE3Q05541 303 aa6.57□□□□□ -1.36
SKI6YGR195W YDL177CQ12257 170 aa6.57□□□□□ -1.36
SKI6YGR195W YGR161W-CQ3E744 92 aa6.57□□□□□ -1.36
SKI6YGR195W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
SKI6YGR195W RPN4Q03465 531 aa6.56□□□□□ -1.36
SKI6YGR195W YOL057WQ08225 711 aa6.56□□□□□ -1.36
SKI6YGR195W PRP6P19735 899 aaPredicted RBP6.55□□□□□ -1.36
SKI6YGR195W CLN2P20438 545 aa6.55□□□□□ -1.36
SKI6YGR195W NFS1P25374 497 aa6.55□□□□□ -1.36
SKI6YGR195W NNK1P36003 928 aa6.55□□□□□ -1.36
SKI6YGR195W ADD66P36040 267 aa6.55□□□□□ -1.36
SKI6YGR195W PMC1P38929 1173 aaPredicted RBP6.55□□□□□ -1.36
SKI6YGR195W YAR028WP39548 234 aa6.55□□□□□ -1.36
SKI6YGR195W GTS1P40956 396 aa6.55□□□□□ -1.36
SKI6YGR195W EST2Q06163 884 aa6.55□□□□□ -1.36
SKI6YGR195W ETP1P38748 585 aaKnown RBP6.54□□□□□ -1.36
SKI6YGR195W NMD3P38861 518 aaKnown RBP6.54□□□□□ -1.36
SKI6YGR195W RKM2Q03942 479 aa6.54□□□□□ -1.36
SKI6YGR195W UTP14Q04500 899 aaKnown RBP6.54□□□□□ -1.36
SKI6YGR195W HDA2Q06629 674 aa6.54□□□□□ -1.36
SKI6YGR195W CDC53Q12018 815 aaKnown RBP6.54□□□□□ -1.36
SKI6YGR195W GCR1P07261 785 aa6.53□□□□□ -1.36
SKI6YGR195W GRX4P32642 244 aa6.53□□□□□ -1.36
SKI6YGR195W SMY2P32909 740 aaKnown RBP6.53□□□□□ -1.36
SKI6YGR195W ATG14P38270 344 aa6.53□□□□□ -1.36
SKI6YGR195W LAP2Q10740 671 aa6.53□□□□□ -1.36
SKI6YGR195W GRX7P38068 203 aa6.52□□□□□ -1.37
SKI6YGR195W MRPL22P53881 309 aa6.52□□□□□ -1.37
SKI6YGR195W ORC3P54790 616 aa6.52□□□□□ -1.37
SKI6YGR195W PIN2Q12057 282 aa6.52□□□□□ -1.37
SKI6YGR195W RET1P22276 1149 aaKnown RBP6.51□□□□□ -1.37
SKI6YGR195W HSE1P38753 452 aa6.51□□□□□ -1.37
SKI6YGR195W MNN1P39106 762 aa6.51□□□□□ -1.37
SKI6YGR195W ENT3P47160 408 aa6.51□□□□□ -1.37
SKI6YGR195W GNP1P48813 663 aa6.51□□□□□ -1.37
SKI6YGR195W YNR063WP53749 607 aa6.51□□□□□ -1.37
SKI6YGR195W SIW14P53965 281 aa6.51□□□□□ -1.37
SKI6YGR195W VPS16Q03308 798 aa6.51□□□□□ -1.37
SKI6YGR195W MRL1Q06815 381 aa6.51□□□□□ -1.37
SKI6YGR195W MET6P05694 767 aaKnown RBP6.5□□□□□ -1.37
SKI6YGR195W KAR1P11927 433 aa6.5□□□□□ -1.37
SKI6YGR195W PBP2P38151 413 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SKI6YGR195W HXT13P39924 564 aa6.5□□□□□ -1.37
SKI6YGR195W HXT17P53631 564 aa6.5□□□□□ -1.37
SKI6YGR195W HXT15P54854 567 aa6.5□□□□□ -1.37
SKI6YGR195W SSF2Q12153 453 aaPredicted RBP6.5□□□□□ -1.37
SKI6YGR195W AFG2P32794 780 aa6.49□□□□□ -1.37
SKI6YGR195W PET112P33893 541 aa6.49□□□□□ -1.37
SKI6YGR195W MNR2P35724 969 aa6.49□□□□□ -1.37
SKI6YGR195W BUD6P41697 788 aa6.49□□□□□ -1.37
SKI6YGR195W TY4A-JP47023 414 aa6.49□□□□□ -1.37
SKI6YGR195W ROD1Q02805 837 aa6.49□□□□□ -1.37
SKI6YGR195W CEF1Q03654 590 aaPredicted RBP6.49□□□□□ -1.37
SKI6YGR195W TMA64Q04600 565 aaKnown RBP6.49□□□□□ -1.37
SKI6YGR195W RSA3Q05942 220 aaKnown RBP6.49□□□□□ -1.37
SKI6YGR195W YDL121CQ07541 149 aa6.49□□□□□ -1.37
SKI6YGR195W RTT10Q08924 1013 aa6.49□□□□□ -1.37
SKI6YGR195W QNS1P38795 714 aaKnown RBP6.48□□□□□ -1.37
SKI6YGR195W VPS53P47061 822 aa6.48□□□□□ -1.37
SKI6YGR195W ECM16Q04217 1267 aaKnown RBP6.48□□□□□ -1.37
SKI6YGR195W YLR257WQ06146 321 aaKnown RBP6.48□□□□□ -1.37
SKI6YGR195W DED1P06634 604 aaKnown RBP6.47□□□□□ -1.37
SKI6YGR195W GAL11P19659 1081 aa6.47□□□□□ -1.37
SKI6YGR195W TOD6P34219 525 aa6.47□□□□□ -1.37
SKI6YGR195W CWC24P53769 259 aa6.47□□□□□ -1.37
SKI6YGR195W PUS7Q08647 676 aaKnown RBP6.47□□□□□ -1.37
SKI6YGR195W RAD27P26793 382 aa6.46□□□□□ -1.38
SKI6YGR195W MKK2P32491 506 aa6.46□□□□□ -1.38
SKI6YGR195W DUT1P33317 147 aa6.46□□□□□ -1.38
SKI6YGR195W YJR142WP47173 342 aa6.46□□□□□ -1.38
SKI6YGR195W TMA46Q12000 345 aaKnown RBP6.46□□□□□ -1.38
SKI6YGR195W CDC34P14682 295 aa6.45□□□□□ -1.38
SKI6YGR195W DPB3P27344 201 aa6.45□□□□□ -1.38
SKI6YGR195W ERP2P39704 215 aa6.45□□□□□ -1.38
SKI6YGR195W TPP1Q03796 238 aa6.45□□□□□ -1.38
SKI6YGR195W BDF2Q07442 638 aa6.45□□□□□ -1.38
SKI6YGR195W BRE1Q07457 700 aaKnown RBP6.45□□□□□ -1.38
SKI6YGR195W HRK1Q08732 759 aaKnown RBP6.45□□□□□ -1.38
SKI6YGR195W PTC5Q12511 572 aa6.45□□□□□ -1.38
SKI6YGR195W RER2P35196 286 aa6.44□□□□□ -1.38
SKI6YGR195W ALG3P38179 458 aa6.44□□□□□ -1.38
SKI6YGR195W UBP12P39538 1254 aa6.44□□□□□ -1.38
SKI6YGR195W RAT1Q02792 1006 aaKnown RBP6.44□□□□□ -1.38
SKI6YGR195W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms