RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W PUB1P32588 453 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
LSB1YGR136W LDH1P38139 375 aa5.07□□□□□ -1.6
LSB1YGR136W DYS1P38791 387 aa5.07□□□□□ -1.6
LSB1YGR136W HXT8P40886 569 aa5.07□□□□□ -1.6
LSB1YGR136W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
LSB1YGR136W ESF1Q06344 628 aaKnown RBP5.07□□□□□ -1.6
LSB1YGR136W GPI13Q07830 1017 aa5.07□□□□□ -1.6
LSB1YGR136W YLR122CQ12312 125 aa5.07□□□□□ -1.6
LSB1YGR136W RIM15P43565 1770 aa5.06□□□□□ -1.6
LSB1YGR136W RAD4P14736 754 aa5.06□□□□□ -1.6
LSB1YGR136W KCC4P25389 1037 aa5.06□□□□□ -1.6
LSB1YGR136W ELM1P32801 640 aa5.06□□□□□ -1.6
LSB1YGR136W LIP5P32875 414 aa5.06□□□□□ -1.6
LSB1YGR136W RPT1P33299 467 aaKnown RBP5.06□□□□□ -1.6
LSB1YGR136W MNN4P36044 1178 aa5.06□□□□□ -1.6
LSB1YGR136W FPR3P38911 411 aaKnown RBP5.06□□□□□ -1.6
LSB1YGR136W SAP155P43612 1002 aa5.06□□□□□ -1.6
LSB1YGR136W SUT1P53032 299 aaKnown RBP5.06□□□□□ -1.6
LSB1YGR136W THI22Q06490 572 aa5.06□□□□□ -1.6
LSB1YGR136W CLC1P17891 233 aa5.05□□□□□ -1.6
LSB1YGR136W VMA3P25515 160 aa5.05□□□□□ -1.6
LSB1YGR136W MNR2P35724 969 aa5.05□□□□□ -1.6
LSB1YGR136W APM2P38700 605 aa5.05□□□□□ -1.6
LSB1YGR136W FIR1P40020 876 aa5.05□□□□□ -1.6
LSB1YGR136W NTA1P40354 457 aa5.05□□□□□ -1.6
LSB1YGR136W DAK2P43550 591 aa5.05□□□□□ -1.6
LSB1YGR136W BUD27P43573 796 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
LSB1YGR136W YFR016CP43597 1233 aaKnown RBP5.05□□□□□ -1.6
LSB1YGR136W UTP22P53254 1237 aaPredicted RBP5.05□□□□□ -1.6
LSB1YGR136W YGR122WP53272 402 aa5.05□□□□□ -1.6
LSB1YGR136W YNR040WP53736 256 aa5.05□□□□□ -1.6
LSB1YGR136W HEF3P53978 1044 aaKnown RBP5.05□□□□□ -1.6
LSB1YGR136W CUS1Q02554 436 aaPredicted RBP5.05□□□□□ -1.6
LSB1YGR136W RMT2Q03305 412 aa5.05□□□□□ -1.6
LSB1YGR136W JIP5Q06214 492 aaPredicted RBP5.05□□□□□ -1.6
LSB1YGR136W SLP1Q12232 587 aa5.05□□□□□ -1.6
LSB1YGR136W RAD2P07276 1031 aa5.04□□□□□ -1.6
LSB1YGR136W RSC6P25632 483 aa5.04□□□□□ -1.6
LSB1YGR136W KAP122P32767 1081 aa5.04□□□□□ -1.6
LSB1YGR136W KTR2P33550 425 aa5.04□□□□□ -1.6
LSB1YGR136W TOS1P38288 455 aa5.04□□□□□ -1.6
LSB1YGR136W FYV10P40492 516 aa5.04□□□□□ -1.6
LSB1YGR136W YJL049WP47048 450 aa5.04□□□□□ -1.6
LSB1YGR136W ZDS1P50111 915 aaKnown RBP5.04□□□□□ -1.6
LSB1YGR136W YNL050CP53952 270 aa5.04□□□□□ -1.6
LSB1YGR136W BSC2Q05611 235 aa5.04□□□□□ -1.6
LSB1YGR136W NOC3Q07896 663 aaPredicted RBP5.04□□□□□ -1.6
LSB1YGR136W ALE1Q08548 619 aa5.04□□□□□ -1.6
LSB1YGR136W PIN2Q12057 282 aa5.04□□□□□ -1.6
LSB1YGR136W SER1P33330 395 aaKnown RBP5.03□□□□□ -1.6
LSB1YGR136W RAD55P38953 406 aa5.03□□□□□ -1.6
LSB1YGR136W MAD1P40957 749 aa5.03□□□□□ -1.6
LSB1YGR136W DOS2P54858 310 aa5.03□□□□□ -1.6
LSB1YGR136W NSE3Q05541 303 aa5.03□□□□□ -1.6
LSB1YGR136W RTT109Q07794 436 aa5.03□□□□□ -1.6
LSB1YGR136W CTI6Q08923 506 aa5.03□□□□□ -1.6
LSB1YGR136W NYV1Q12255 253 aa5.03□□□□□ -1.6
LSB1YGR136W IME2P32581 645 aa5.02□□□□□ -1.61
LSB1YGR136W IRS4P36115 615 aaKnown RBP5.02□□□□□ -1.61
LSB1YGR136W SAF1P38352 637 aa5.02□□□□□ -1.61
LSB1YGR136W FUN12P39730 1002 aaKnown RBP5.02□□□□□ -1.61
LSB1YGR136W MAM1P40065 302 aa5.02□□□□□ -1.61
LSB1YGR136W RRT14P40470 206 aa5.02□□□□□ -1.61
LSB1YGR136W EAF6P47128 113 aa5.02□□□□□ -1.61
LSB1YGR136W MDG1P53885 366 aa5.02□□□□□ -1.61
LSB1YGR136W MAG2Q06436 670 aaKnown RBP5.02□□□□□ -1.61
LSB1YGR136W BRE4Q07660 1125 aa5.02□□□□□ -1.61
LSB1YGR136W CYC8P14922 966 aa5.01□□□□□ -1.61
LSB1YGR136W ISW1P38144 1129 aa5.01□□□□□ -1.61
LSB1YGR136W YIL092WP40497 633 aa5.01□□□□□ -1.61
LSB1YGR136W GYP7P48365 746 aa5.01□□□□□ -1.61
LSB1YGR136W YGL082WP53155 381 aa5.01□□□□□ -1.61
LSB1YGR136W VPS16Q03308 798 aa5.01□□□□□ -1.61
LSB1YGR136W RIX7Q07844 837 aaKnown RBP5.01□□□□□ -1.61
LSB1YGR136W SSP2Q08646 371 aa5.01□□□□□ -1.61
LSB1YGR136W MCD1Q12158 566 aa5.01□□□□□ -1.61
LSB1YGR136W LYS2P07702 1392 aa5.01□□□□□ -1.61
LSB1YGR136W TY4B-PA0A0B7P3V8 1104 aa5□□□□□ -1.61
LSB1YGR136W MRP10O75012 95 aa5□□□□□ -1.61
LSB1YGR136W LPD1P09624 499 aaKnown RBP5□□□□□ -1.61
LSB1YGR136W CHS2P14180 963 aa5□□□□□ -1.61
LSB1YGR136W RPC31P17890 251 aa5□□□□□ -1.61
LSB1YGR136W MSN1P22148 382 aa5□□□□□ -1.61
LSB1YGR136W NMD2P38798 1089 aaKnown RBP5□□□□□ -1.61
LSB1YGR136W PSY2P40164 858 aa5□□□□□ -1.61
LSB1YGR136W QDR2P40474 542 aa5□□□□□ -1.61
LSB1YGR136W BMS1Q08965 1183 aaKnown RBP5□□□□□ -1.61
LSB1YGR136W TY4A-HQ6Q5P6 413 aa5□□□□□ -1.61
LSB1YGR136W COQ4O13525 335 aa4.99□□□□□ -1.61
LSB1YGR136W HXK1P04806 485 aaKnown RBP4.99□□□□□ -1.61
LSB1YGR136W DAL5P15365 543 aa4.99□□□□□ -1.61
LSB1YGR136W MCM2P29469 868 aa4.99□□□□□ -1.61
LSB1YGR136W GIP1P38229 639 aa4.99□□□□□ -1.61
LSB1YGR136W RGD2P43556 714 aa4.99□□□□□ -1.61
LSB1YGR136W YGR130CP53278 816 aa4.99□□□□□ -1.61
LSB1YGR136W YCS4Q06156 1176 aa4.99□□□□□ -1.61
LSB1YGR136W YOR296WQ08748 1289 aa4.99□□□□□ -1.61
LSB1YGR136W TY1A-NL1Q12391 440 aaKnown RBP4.99□□□□□ -1.61
LSB1YGR136W YOL098CQ12496 1037 aa4.99□□□□□ -1.61
LSB1YGR136W CTT1P06115 562 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms