RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C ETP1P38748 585 aaKnown RBP5.45□□□□□ -1.54
SRB5YGR104C DOS2P54858 310 aa5.45□□□□□ -1.54
SRB5YGR104C HOS3Q02959 697 aaKnown RBP5.45□□□□□ -1.54
SRB5YGR104C RLP24Q07915 199 aaKnown RBP5.45□□□□□ -1.54
SRB5YGR104C YOR352WQ08816 343 aa5.45□□□□□ -1.54
SRB5YGR104C YDL177CQ12257 170 aa5.45□□□□□ -1.54
SRB5YGR104C PTC5Q12511 572 aa5.45□□□□□ -1.54
SRB5YGR104C YTA7P40340 1379 aa5.44□□□□□ -1.54
SRB5YGR104C PRE9P23638 258 aaKnown RBP5.44□□□□□ -1.54
SRB5YGR104C SPC42P36094 363 aa5.44□□□□□ -1.54
SRB5YGR104C AIM3P38266 947 aaKnown RBP5.44□□□□□ -1.54
SRB5YGR104C MGE1P38523 228 aa5.44□□□□□ -1.54
SRB5YGR104C NMD3P38861 518 aaKnown RBP5.44□□□□□ -1.54
SRB5YGR104C FAA3P39002 694 aa5.44□□□□□ -1.54
SRB5YGR104C PIK1P39104 1066 aa5.44□□□□□ -1.54
SRB5YGR104C YJR008WP47085 338 aa5.44□□□□□ -1.54
SRB5YGR104C BUD21Q08492 214 aaPredicted RBP5.44□□□□□ -1.54
SRB5YGR104C HEM13P11353 328 aaKnown RBP5.43□□□□□ -1.54
SRB5YGR104C PUF4P25339 888 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SRB5YGR104C KIP1P28742 1111 aa5.43□□□□□ -1.54
SRB5YGR104C MET10P39692 1035 aa5.43□□□□□ -1.54
SRB5YGR104C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SRB5YGR104C HDA2Q06629 674 aa5.43□□□□□ -1.54
SRB5YGR104C RPS13P05756 151 aaKnown RBP5.42□□□□□ -1.54
SRB5YGR104C AFG2P32794 780 aa5.42□□□□□ -1.54
SRB5YGR104C NAB3P38996 802 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SRB5YGR104C GIP4P39732 760 aa5.42□□□□□ -1.54
SRB5YGR104C PIC2P40035 300 aa5.42□□□□□ -1.54
SRB5YGR104C SEC26P41810 973 aaKnown RBP5.42□□□□□ -1.54
SRB5YGR104C SIW14P53965 281 aa5.42□□□□□ -1.54
SRB5YGR104C TOS4Q06266 489 aa5.42□□□□□ -1.54
SRB5YGR104C RSB1Q08417 382 aa5.42□□□□□ -1.54
SRB5YGR104C YLR358CO13565 187 aa5.41□□□□□ -1.54
SRB5YGR104C PAM1P37304 830 aaKnown RBP5.41□□□□□ -1.54
SRB5YGR104C ALG3P38179 458 aa5.41□□□□□ -1.54
SRB5YGR104C IPL1P38991 367 aa5.41□□□□□ -1.54
SRB5YGR104C SEN54Q02825 467 aaPredicted RBP5.41□□□□□ -1.54
SRB5YGR104C FLR1P38124 548 aa5.4□□□□□ -1.54
SRB5YGR104C RGD1P38339 666 aa5.4□□□□□ -1.54
SRB5YGR104C YPL277CQ08989 487 aa5.4□□□□□ -1.54
SRB5YGR104C RAD2P07276 1031 aa5.39□□□□□ -1.55
SRB5YGR104C TOD6P34219 525 aa5.39□□□□□ -1.55
SRB5YGR104C GSF2Q04697 403 aaKnown RBP5.39□□□□□ -1.55
SRB5YGR104C SGD1Q06132 899 aa5.39□□□□□ -1.55
SRB5YGR104C SPO21Q12411 609 aa5.39□□□□□ -1.55
SRB5YGR104C CYC8P14922 966 aa5.38□□□□□ -1.55
SRB5YGR104C SEC8P32855 1065 aa5.38□□□□□ -1.55
SRB5YGR104C TAF1P46677 1066 aa5.38□□□□□ -1.55
SRB5YGR104C DED1P06634 604 aaKnown RBP5.37□□□□□ -1.55
SRB5YGR104C SNF5P18480 905 aa5.37□□□□□ -1.55
SRB5YGR104C PRE10P21242 288 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SRB5YGR104C MKK2P32491 506 aa5.37□□□□□ -1.55
SRB5YGR104C CNN1P43618 361 aa5.36□□□□□ -1.55
SRB5YGR104C ZDS1P50111 915 aaKnown RBP5.36□□□□□ -1.55
SRB5YGR104C CLU1Q03690 1277 aaKnown RBP5.36□□□□□ -1.55
SRB5YGR104C RSM24Q03976 319 aa5.36□□□□□ -1.55
SRB5YGR104C SYP1P25623 870 aaKnown RBP5.35□□□□□ -1.55
SRB5YGR104C DOM34P33309 386 aa5.35□□□□□ -1.55
SRB5YGR104C RFC5P38251 354 aa5.35□□□□□ -1.55
SRB5YGR104C LAM1P38851 1228 aa5.35□□□□□ -1.55
SRB5YGR104C GPB2P39717 880 aa5.35□□□□□ -1.55
SRB5YGR104C POL32P47110 350 aa5.35□□□□□ -1.55
SRB5YGR104C RMD1Q03441 430 aa5.35□□□□□ -1.55
SRB5YGR104C YDR132CQ03900 495 aa5.35□□□□□ -1.55
SRB5YGR104C RCL1Q08096 367 aaPredicted RBP5.35□□□□□ -1.55
SRB5YGR104C KIN2P13186 1147 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C RAD27P26793 382 aa5.34□□□□□ -1.55
SRB5YGR104C RPS0AP32905 252 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C DEF1P35732 738 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C OCA5P38738 679 aa5.34□□□□□ -1.55
SRB5YGR104C MEF2P39677 819 aa5.34□□□□□ -1.55
SRB5YGR104C RPS26AP39938 119 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C RPS26BP39939 119 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C YJR107WP47145 328 aa5.34□□□□□ -1.55
SRB5YGR104C PBP1P53297 722 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C ROD1Q02805 837 aa5.34□□□□□ -1.55
SRB5YGR104C GCN5Q03330 439 aa5.34□□□□□ -1.55
SRB5YGR104C ESF1Q06344 628 aaKnown RBP5.34□□□□□ -1.55
SRB5YGR104C MRL1Q06815 381 aa5.34□□□□□ -1.55
SRB5YGR104C CYC1P00044 109 aaPredicted RBP5.33□□□□□ -1.56
SRB5YGR104C DBP5P20449 482 aaKnown RBP5.33□□□□□ -1.56
SRB5YGR104C HEM3P28789 327 aa5.33□□□□□ -1.56
SRB5YGR104C TY4A-JP47023 414 aa5.33□□□□□ -1.56
SRB5YGR104C GNP1P48813 663 aa5.33□□□□□ -1.56
SRB5YGR104C TMA46Q12000 345 aaKnown RBP5.33□□□□□ -1.56
SRB5YGR104C HXT13P39924 564 aa5.32□□□□□ -1.56
SRB5YGR104C SPT20P50875 604 aa5.32□□□□□ -1.56
SRB5YGR104C HXT17P53631 564 aa5.32□□□□□ -1.56
SRB5YGR104C HXT15P54854 567 aa5.32□□□□□ -1.56
SRB5YGR104C RAT1Q02792 1006 aaKnown RBP5.32□□□□□ -1.56
SRB5YGR104C ATG13Q06628 738 aa5.32□□□□□ -1.56
SRB5YGR104C THS1P04801 734 aaKnown RBP5.31□□□□□ -1.56
SRB5YGR104C TAT2P38967 592 aa5.31□□□□□ -1.56
SRB5YGR104C UBX5Q06682 500 aa5.31□□□□□ -1.56
SRB5YGR104C BRE1Q07457 700 aaKnown RBP5.31□□□□□ -1.56
SRB5YGR104C RTT10Q08924 1013 aa5.31□□□□□ -1.56
SRB5YGR104C RPT2P40327 437 aaKnown RBP5.3□□□□□ -1.56
SRB5YGR104C MPP10P47083 593 aaKnown RBP5.3□□□□□ -1.56
SRB5YGR104C FPR4Q06205 392 aaPredicted RBP5.3□□□□□ -1.56
SRB5YGR104C GNT1Q12096 491 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms