RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C TNA1P53322 534 aa5.69□□□□□ -1.5
PRP38YGR075C HOS3Q02959 697 aaKnown RBP5.69□□□□□ -1.5
PRP38YGR075C NBA1Q08229 501 aaKnown RBP5.69□□□□□ -1.5
PRP38YGR075C YPL260WQ08977 551 aa5.69□□□□□ -1.5
PRP38YGR075C PRP6P19735 899 aaPredicted RBP5.68□□□□□ -1.5
PRP38YGR075C AIM3P38266 947 aaKnown RBP5.68□□□□□ -1.5
PRP38YGR075C CCZ1P38273 704 aa5.68□□□□□ -1.5
PRP38YGR075C FOL2P51601 243 aaKnown RBP5.68□□□□□ -1.5
PRP38YGR075C SPS1P08458 490 aa5.67□□□□□ -1.5
PRP38YGR075C SYP1P25623 870 aaKnown RBP5.67□□□□□ -1.5
PRP38YGR075C ASF1P32447 279 aa5.67□□□□□ -1.5
PRP38YGR075C RGD1P38339 666 aa5.67□□□□□ -1.5
PRP38YGR075C YFL054CP43549 646 aa5.67□□□□□ -1.5
PRP38YGR075C DBP5P20449 482 aaKnown RBP5.66□□□□□ -1.5
PRP38YGR075C PIK1P39104 1066 aa5.66□□□□□ -1.5
PRP38YGR075C CNN1P43618 361 aa5.66□□□□□ -1.5
PRP38YGR075C SNO2P53823 222 aa5.66□□□□□ -1.5
PRP38YGR075C YER152CP10356 443 aa5.65□□□□□ -1.5
PRP38YGR075C MLS1P30952 554 aa5.65□□□□□ -1.5
PRP38YGR075C PEP7P32609 515 aa5.65□□□□□ -1.5
PRP38YGR075C OYE2Q03558 400 aaKnown RBP5.65□□□□□ -1.5
PRP38YGR075C ABZ1P37254 787 aaPredicted RBP5.64□□□□□ -1.51
PRP38YGR075C MPH1P40562 993 aa5.64□□□□□ -1.51
PRP38YGR075C RIM8P53179 542 aa5.64□□□□□ -1.51
PRP38YGR075C ESC8Q08119 714 aa5.64□□□□□ -1.51
PRP38YGR075C RTT10Q08924 1013 aa5.64□□□□□ -1.51
PRP38YGR075C DUT1P33317 147 aa5.63□□□□□ -1.51
PRP38YGR075C RER2P35196 286 aa5.63□□□□□ -1.51
PRP38YGR075C ENV11P53246 860 aa5.63□□□□□ -1.51
PRP38YGR075C RMD1Q03441 430 aa5.63□□□□□ -1.51
PRP38YGR075C PUF4P25339 888 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
PRP38YGR075C YCR015CP25616 317 aa5.62□□□□□ -1.51
PRP38YGR075C SEC26P41810 973 aaKnown RBP5.62□□□□□ -1.51
PRP38YGR075C TAF1P46677 1066 aa5.62□□□□□ -1.51
PRP38YGR075C TIF35Q04067 274 aaKnown RBP5.62□□□□□ -1.51
PRP38YGR075C RSB1Q08417 382 aa5.62□□□□□ -1.51
PRP38YGR075C YPL277CQ08989 487 aa5.62□□□□□ -1.51
PRP38YGR075C SOD2P00447 233 aa5.61□□□□□ -1.51
PRP38YGR075C RPS13P05756 151 aaKnown RBP5.61□□□□□ -1.51
PRP38YGR075C FLR1P38124 548 aa5.61□□□□□ -1.51
PRP38YGR075C HNT2P49775 206 aa5.61□□□□□ -1.51
PRP38YGR075C RAD27P26793 382 aa5.6□□□□□ -1.51
PRP38YGR075C YDR132CQ03900 495 aa5.6□□□□□ -1.51
PRP38YGR075C RIB2Q12362 591 aaKnown RBP5.6□□□□□ -1.51
PRP38YGR075C CYC1P00044 109 aaPredicted RBP5.59□□□□□ -1.51
PRP38YGR075C TOD6P34219 525 aa5.59□□□□□ -1.51
PRP38YGR075C YKL222CP35995 705 aa5.59□□□□□ -1.51
PRP38YGR075C MCM7P38132 845 aa5.59□□□□□ -1.51
PRP38YGR075C EEB1Q02891 456 aa5.59□□□□□ -1.51
PRP38YGR075C TRP2P00899 507 aaKnown RBP5.58□□□□□ -1.52
PRP38YGR075C CDC34P14682 295 aa5.58□□□□□ -1.52
PRP38YGR075C PET112P33893 541 aa5.58□□□□□ -1.52
PRP38YGR075C GIP4P39732 760 aa5.58□□□□□ -1.52
PRP38YGR075C SGD1Q06132 899 aa5.58□□□□□ -1.52
PRP38YGR075C TMA46Q12000 345 aaKnown RBP5.58□□□□□ -1.52
PRP38YGR075C GNT1Q12096 491 aa5.58□□□□□ -1.52
PRP38YGR075C BAS1P22035 811 aa5.57□□□□□ -1.52
PRP38YGR075C LYP1P32487 611 aa5.57□□□□□ -1.52
PRP38YGR075C MXR1P40029 184 aa5.57□□□□□ -1.52
PRP38YGR075C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
PRP38YGR075C SRM1P21827 482 aa5.56□□□□□ -1.52
PRP38YGR075C LAM1P38851 1228 aa5.56□□□□□ -1.52
PRP38YGR075C RPL11AP0C0W9 174 aaKnown RBP5.55□□□□□ -1.52
PRP38YGR075C DBP2P24783 546 aaKnown RBP5.55□□□□□ -1.52
PRP38YGR075C RFC5P38251 354 aa5.55□□□□□ -1.52
PRP38YGR075C MET10P39692 1035 aa5.55□□□□□ -1.52
PRP38YGR075C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
PRP38YGR075C GCN5Q03330 439 aa5.55□□□□□ -1.52
PRP38YGR075C PLB2Q03674 706 aa5.55□□□□□ -1.52
PRP38YGR075C YPL066WQ12194 479 aa5.55□□□□□ -1.52
PRP38YGR075C SVS1Q12254 260 aa5.55□□□□□ -1.52
PRP38YGR075C RPL11BQ3E757 174 aaPredicted RBP5.55□□□□□ -1.52
PRP38YGR075C GAL10P04397 699 aa5.54□□□□□ -1.52
PRP38YGR075C CMP2P14747 604 aa5.54□□□□□ -1.52
PRP38YGR075C MOT2P34909 587 aaKnown RBP5.54□□□□□ -1.52
PRP38YGR075C MEF2P39677 819 aa5.54□□□□□ -1.52
PRP38YGR075C ROT1Q03691 256 aa5.54□□□□□ -1.52
PRP38YGR075C RSM24Q03976 319 aa5.54□□□□□ -1.52
PRP38YGR075C ATG13Q06628 738 aa5.54□□□□□ -1.52
PRP38YGR075C YOR352WQ08816 343 aa5.54□□□□□ -1.52
PRP38YGR075C PRE10P21242 288 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PRP38YGR075C SLA2P33338 968 aa5.53□□□□□ -1.52
PRP38YGR075C MNR2P35724 969 aa5.53□□□□□ -1.52
PRP38YGR075C UGA2P38067 497 aa5.53□□□□□ -1.52
PRP38YGR075C SPT20P50875 604 aa5.53□□□□□ -1.52
PRP38YGR075C TYW3P53177 273 aa5.53□□□□□ -1.52
PRP38YGR075C CLU1Q03690 1277 aaKnown RBP5.53□□□□□ -1.52
PRP38YGR075C ACM1Q08981 209 aa5.53□□□□□ -1.52
PRP38YGR075C BI4P03879 638 aa5.52□□□□□ -1.53
PRP38YGR075C INO1P11986 533 aa5.52□□□□□ -1.53
PRP38YGR075C PNT1P38969 423 aa5.52□□□□□ -1.53
PRP38YGR075C SIZ1Q04195 904 aa5.52□□□□□ -1.53
PRP38YGR075C DUS4Q06063 367 aa5.52□□□□□ -1.53
PRP38YGR075C SPP382Q06411 708 aaPredicted RBP5.52□□□□□ -1.53
PRP38YGR075C ACE2P21192 770 aa5.51□□□□□ -1.53
PRP38YGR075C RKM4Q12504 494 aa5.51□□□□□ -1.53
PRP38YGR075C CDC6P09119 513 aa5.5□□□□□ -1.53
PRP38YGR075C KIN2P13186 1147 aaKnown RBP5.5□□□□□ -1.53
PRP38YGR075C APL1P27351 700 aa5.5□□□□□ -1.53
PRP38YGR075C ESC2Q06340 456 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms