RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	GCD6	P32501	712 aa	Known RBP	5.9	□□□□□ -1.47
VTC2	YFL004W	FBP26	P32604	452 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	TIF3	P34167	436 aa	Known RBP	5.9	□□□□□ -1.47
VTC2	YFL004W	SHM1	P37292	490 aa	Predicted RBP	5.9	□□□□□ -1.47
VTC2	YFL004W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.47	not detected
VTC2	YFL004W	AMN1	P38285	549 aa	Predicted RBP	5.9	□□□□□ -1.47
VTC2	YFL004W	FZO1	P38297	855 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	KIC1	P38692	1080 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	IPL1	P38991	367 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	SUM1	P46676	1062 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	TFB3	Q03290	321 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	ARG4	P04076	463 aa	Predicted RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	RPL22A	P05749	121 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	ADE3	P07245	946 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	SWI6	P09959	803 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	MRP7	P12687	371 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	KTR1	P27810	393 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	RPC19	P28000	142 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	SRB4	P32569	687 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	NPL6	P32832	435 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	CIC1	P38779	376 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	SHQ1	P40486	507 aa	Predicted RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	ATH1	P48016	1211 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	HFM1	P51979	1187 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	YML119W	Q03208	357 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	YPR097W	Q06839	1073 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	SSA2	P10592	639 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	RAD57	P25301	460 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	RPN2	P32565	945 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	SQT1	P35184	431 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	ERC1	P38767	581 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	SCS2	P40075	244 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	NOB1	Q08444	459 aa	Known RBP	5.89	□□□□□ -1.47
VTC2	YFL004W	AFT2	Q08957	416 aa		5.89	□□□□□ -1.47
VTC2	YFL004W	RGP1	P16664	663 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	UGA3	P26370	528 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	ASF1	P32447	279 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	PET100	P38958	111 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	STB1	P42845	420 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	VTC2	P43585	828 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	RBL2	P48606	106 aa	Known RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	YMR196W	Q04336	1088 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	BDF2	Q07442	638 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	TAF10	Q12030	206 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	HXK1	P04806	485 aa	Known RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	RPS6A	P0CX37	236 aa	Known RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	RPS6B	P0CX38	236 aa	Predicted RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	CKI1	P20485	582 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	BUD2	P33314	1104 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	STE13	P33894	931 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	LAS1	P36146	502 aa	Predicted RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	MLC1	P53141	149 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	SUB1	P54000	292 aa	Known RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	ALO1	P54783	526 aa	Known RBP	5.88	□□□□□ -1.47
VTC2	YFL004W	VPS16	Q03308	798 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	OSW1	Q08692	278 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	HIF1	Q12373	385 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	LSO1	Q3E827	93 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	RSF2	P46974	1380 aa		5.88	□□□□□ -1.47
VTC2	YFL004W	DPS1	P04802	557 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	SSA1	P10591	642 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	SPT16	P32558	1035 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	RIB7	P33312	244 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	OAF3	P36023	863 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	STM1	P39015	273 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	TAF1	P46677	1066 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	FMS1	P50264	508 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	BTN2	P53286	410 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	YDR090C	Q03193	310 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	GIR2	Q03768	265 aa	Predicted RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	POB3	Q04636	552 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	TAF9	Q05027	157 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	YOL057W	Q08225	711 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	RRP6	Q12149	733 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	RIB2	Q12362	591 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	RPB2	P08518	1224 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	THR4	P16120	514 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	NIP1	P32497	812 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	CSE1	P33307	960 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	YET1	P35723	206 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	TDA3	P38758	523 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	YAP5	P40574	245 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	MAD1	P40957	749 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	GPD2	P41911	440 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	SFB2	P53953	876 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	UTP5	Q04177	643 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	MRD1	Q06106	887 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	GPN2	Q08726	347 aa	Predicted RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	YOR296W	Q08748	1289 aa		5.87	□□□□□ -1.47
VTC2	YFL004W	GRE2	Q12068	342 aa	Known RBP	5.87	□□□□□ -1.47
VTC2	YFL004W	TOM70	P07213	617 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	RAD4	P14736	754 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	SPO12	P17123	173 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	GUT1	P32190	709 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	EFB1	P32471	206 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	SAC6	P32599	642 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	PTH2	P34222	208 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	KTR3	P38130	404 aa	Predicted RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	YBR062C	P38239	180 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	SPP381	P38282	291 aa	Predicted RBP	5.86	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms