RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W BOI2P39969 1040 aa6.19□□□□□ -1.42
DEG1YFL001W NUG1P40010 520 aaKnown RBP6.19□□□□□ -1.42
DEG1YFL001W YEN1P40028 759 aa6.19□□□□□ -1.42
DEG1YFL001W SLS1P42900 643 aa6.19□□□□□ -1.42
DEG1YFL001W YGL176CP46945 554 aa6.19□□□□□ -1.42
DEG1YFL001W HAS1Q03532 505 aaKnown RBP6.19□□□□□ -1.42
DEG1YFL001W RKM2Q03942 479 aa6.19□□□□□ -1.42
DEG1YFL001W YDL124WQ07551 312 aaKnown RBP6.19□□□□□ -1.42
DEG1YFL001W YDR215CQ12240 137 aa6.19□□□□□ -1.42
DEG1YFL001W RPL8AP17076 256 aaKnown RBP6.18□□□□□ -1.42
DEG1YFL001W MBP1P39678 833 aa6.18□□□□□ -1.42
DEG1YFL001W ZDS1P50111 915 aaKnown RBP6.18□□□□□ -1.42
DEG1YFL001W UGO1Q03327 502 aa6.18□□□□□ -1.42
DEG1YFL001W AOS1Q06624 347 aa6.18□□□□□ -1.42
DEG1YFL001W AFG2P32794 780 aa6.17□□□□□ -1.42
DEG1YFL001W MPH1P40562 993 aa6.17□□□□□ -1.42
DEG1YFL001W LEM3P42838 414 aa6.17□□□□□ -1.42
DEG1YFL001W YNR029CP53729 429 aaKnown RBP6.17□□□□□ -1.42
DEG1YFL001W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
DEG1YFL001W ADR1P07248 1323 aa6.17□□□□□ -1.42
DEG1YFL001W FPS1P23900 669 aa6.16□□□□□ -1.42
DEG1YFL001W GDH3P39708 457 aa6.16□□□□□ -1.42
DEG1YFL001W NEO1P40527 1151 aa6.16□□□□□ -1.42
DEG1YFL001W HNT2P49775 206 aa6.16□□□□□ -1.42
DEG1YFL001W MAL11P53048 616 aa6.16□□□□□ -1.42
DEG1YFL001W TY1A-DR2Q03964 440 aaKnown RBP6.16□□□□□ -1.42
DEG1YFL001W SFP1P32432 683 aa6.15□□□□□ -1.43
DEG1YFL001W HBS1P32769 611 aaKnown RBP6.15□□□□□ -1.43
DEG1YFL001W MCM7P38132 845 aa6.15□□□□□ -1.43
DEG1YFL001W SLN1P39928 1220 aaPredicted RBP6.15□□□□□ -1.43
DEG1YFL001W HSV2P50079 448 aaPredicted RBP6.15□□□□□ -1.43
DEG1YFL001W MEC3Q02574 474 aa6.15□□□□□ -1.43
DEG1YFL001W HBN1Q96VH4 193 aa6.15□□□□□ -1.43
DEG1YFL001W SCT1P32784 759 aa6.14□□□□□ -1.43
DEG1YFL001W PEX6P33760 1030 aa6.14□□□□□ -1.43
DEG1YFL001W RGD1P38339 666 aa6.14□□□□□ -1.43
DEG1YFL001W PAF1P38351 445 aa6.14□□□□□ -1.43
DEG1YFL001W CCC2P38995 1004 aa6.14□□□□□ -1.43
DEG1YFL001W GEM1P39722 662 aa6.14□□□□□ -1.43
DEG1YFL001W SIP5P40210 489 aaKnown RBP6.14□□□□□ -1.43
DEG1YFL001W NOP2P40991 618 aaKnown RBP6.14□□□□□ -1.43
DEG1YFL001W TFB2Q02939 513 aa6.14□□□□□ -1.43
DEG1YFL001W GIC2Q06648 383 aa6.14□□□□□ -1.43
DEG1YFL001W GCV1P48015 400 aa6.13□□□□□ -1.43
DEG1YFL001W GNT1Q12096 491 aa6.13□□□□□ -1.43
DEG1YFL001W MRC1P25588 1096 aa6.12□□□□□ -1.43
DEG1YFL001W CDC11P32458 415 aa6.12□□□□□ -1.43
DEG1YFL001W ALG3P38179 458 aa6.12□□□□□ -1.43
DEG1YFL001W ATG14P38270 344 aa6.12□□□□□ -1.43
DEG1YFL001W SPO71Q03868 1245 aa6.12□□□□□ -1.43
DEG1YFL001W MCA1Q08601 432 aa6.12□□□□□ -1.43
DEG1YFL001W TOP3P13099 656 aa6.11□□□□□ -1.43
DEG1YFL001W MLS1P30952 554 aa6.11□□□□□ -1.43
DEG1YFL001W TAT1P38085 619 aa6.11□□□□□ -1.43
DEG1YFL001W ENP1P38333 483 aaKnown RBP6.11□□□□□ -1.43
DEG1YFL001W GUS1P46655 708 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
DEG1YFL001W TPO2P53283 614 aa6.11□□□□□ -1.43
DEG1YFL001W SOK2P53438 785 aaPredicted RBP6.11□□□□□ -1.43
DEG1YFL001W ATG13Q06628 738 aa6.11□□□□□ -1.43
DEG1YFL001W YOL057WQ08225 711 aa6.11□□□□□ -1.43
DEG1YFL001W MDM12Q92328 271 aa6.11□□□□□ -1.43
DEG1YFL001W MAC1P35192 417 aa6.1□□□□□ -1.43
DEG1YFL001W REI1P38344 393 aaPredicted RBP6.1□□□□□ -1.43
DEG1YFL001W PAN5P38787 379 aa6.1□□□□□ -1.43
DEG1YFL001W TPM2P40414 161 aa6.1□□□□□ -1.43
DEG1YFL001W SPO74P45819 413 aa6.1□□□□□ -1.43
DEG1YFL001W HLJ1P48353 224 aa6.1□□□□□ -1.43
DEG1YFL001W PTC5Q12511 572 aa6.1□□□□□ -1.43
DEG1YFL001W TOM70P07213 617 aaKnown RBP6.09□□□□□ -1.43
DEG1YFL001W KNS1P32350 737 aaPredicted RBP6.09□□□□□ -1.43
DEG1YFL001W YAR028WP39548 234 aa6.09□□□□□ -1.43
DEG1YFL001W UBP6P43593 499 aaKnown RBP6.09□□□□□ -1.43
DEG1YFL001W YNR063WP53749 607 aa6.09□□□□□ -1.43
DEG1YFL001W YNL193WP53870 558 aa6.09□□□□□ -1.43
DEG1YFL001W YDR306CQ06640 478 aa6.09□□□□□ -1.43
DEG1YFL001W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44 RIP-Chip
DEG1YFL001W MEF1P25039 761 aa6.08□□□□□ -1.44
DEG1YFL001W DOM34P33309 386 aa6.08□□□□□ -1.44
DEG1YFL001W GRX7P38068 203 aa6.08□□□□□ -1.44
DEG1YFL001W SIT1P39980 628 aa6.08□□□□□ -1.44
DEG1YFL001W POL5P39985 1022 aaKnown RBP6.08□□□□□ -1.44
DEG1YFL001W GIP2P40036 548 aa6.08□□□□□ -1.44
DEG1YFL001W VPS53P47061 822 aa6.08□□□□□ -1.44
DEG1YFL001W PMT3P47190 753 aa6.08□□□□□ -1.44
DEG1YFL001W LAP2Q10740 671 aa6.08□□□□□ -1.44
DEG1YFL001W SLP1Q12232 587 aa6.08□□□□□ -1.44
DEG1YFL001W PDC5P16467 563 aaKnown RBP6.07□□□□□ -1.44
DEG1YFL001W AAR2P32357 355 aaPredicted RBP6.07□□□□□ -1.44
DEG1YFL001W PET10P36139 283 aa6.07□□□□□ -1.44
DEG1YFL001W YBR284WP38150 797 aa6.07□□□□□ -1.44
DEG1YFL001W PNT1P38969 423 aa6.07□□□□□ -1.44
DEG1YFL001W YGR237CP50089 785 aa6.07□□□□□ -1.44
DEG1YFL001W FOL1P53848 824 aa6.07□□□□□ -1.44
DEG1YFL001W SPP382Q06411 708 aaPredicted RBP6.07□□□□□ -1.44
DEG1YFL001W YPL260WQ08977 551 aa6.07□□□□□ -1.44
DEG1YFL001W YLL054CQ12244 843 aa6.07□□□□□ -1.44
DEG1YFL001W MSD1P15179 658 aaKnown RBP6.06□□□□□ -1.44
DEG1YFL001W HSE1P38753 452 aa6.06□□□□□ -1.44
DEG1YFL001W YLR001CQ07895 862 aa6.06□□□□□ -1.44
DEG1YFL001W YGR045CP53229 120 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms