RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C SIW14P53965 281 aa7.56□□□□□ -1.2
SHO1YER118C HEH2Q03281 663 aa7.56□□□□□ -1.2
SHO1YER118C WTM2Q12206 467 aa7.56□□□□□ -1.2
SHO1YER118C NHA1Q99271 985 aa7.56□□□□□ -1.2
SHO1YER118C SPS1P08458 490 aa7.55□□□□□ -1.2
SHO1YER118C TOP3P13099 656 aa7.55□□□□□ -1.2
SHO1YER118C DUR3P33413 735 aa7.55□□□□□ -1.2
SHO1YER118C ECM2P38241 364 aaKnown RBP7.55□□□□□ -1.2
SHO1YER118C GPP2P40106 250 aaKnown RBP7.55□□□□□ -1.2
SHO1YER118C VTC2P43585 828 aa7.55□□□□□ -1.2
SHO1YER118C NIT2P47016 307 aa7.55□□□□□ -1.2
SHO1YER118C BNA1P47096 177 aa7.55□□□□□ -1.2
SHO1YER118C YGL140CP53120 1219 aa7.55□□□□□ -1.2
SHO1YER118C RSC1P53236 928 aa7.55□□□□□ -1.2
SHO1YER118C APP1P53933 587 aa7.55□□□□□ -1.2
SHO1YER118C YDR056CQ12025 205 aa7.55□□□□□ -1.2
SHO1YER118C AIR2Q12476 344 aaKnown RBP7.55□□□□□ -1.2
SHO1YER118C HOM3P10869 527 aa7.54□□□□□ -1.2
SHO1YER118C INO1P11986 533 aa7.54□□□□□ -1.2
SHO1YER118C PAT1P25644 796 aaKnown RBP7.54□□□□□ -1.2
SHO1YER118C SPT16P32558 1035 aaKnown RBP7.54□□□□□ -1.2
SHO1YER118C HBS1P32769 611 aaKnown RBP7.54□□□□□ -1.2
SHO1YER118C SEC61P32915 480 aa7.54□□□□□ -1.2
SHO1YER118C MOT2P34909 587 aaKnown RBP7.54□□□□□ -1.2
SHO1YER118C RKM3P38222 552 aa7.54□□□□□ -1.2
SHO1YER118C YBR287WP38355 427 aa7.54□□□□□ -1.2
SHO1YER118C TMA108P40462 946 aa7.54□□□□□ -1.2
SHO1YER118C ENT3P47160 408 aa7.54□□□□□ -1.2
SHO1YER118C TAN1P53072 289 aaPredicted RBP7.54□□□□□ -1.2
SHO1YER118C PIN4P34217 668 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SHO1YER118C MBP1P39678 833 aa7.53□□□□□ -1.2
SHO1YER118C ACA1P39970 489 aa7.53□□□□□ -1.2
SHO1YER118C HIS6P40545 261 aa7.53□□□□□ -1.2
SHO1YER118C MET13P53128 600 aa7.53□□□□□ -1.2
SHO1YER118C YLR352WQ06479 807 aa7.53□□□□□ -1.2
SHO1YER118C OPY2Q06810 360 aa7.53□□□□□ -1.2
SHO1YER118C Q0182Q9ZZW1 134 aa7.53□□□□□ -1.2
SHO1YER118C RAD53P22216 821 aa7.52□□□□□ -1.21
SHO1YER118C URA1P28272 314 aaPredicted RBP7.52□□□□□ -1.21
SHO1YER118C MRF1P30775 413 aaPredicted RBP7.52□□□□□ -1.21
SHO1YER118C MKS1P34072 584 aa7.52□□□□□ -1.21
SHO1YER118C APE4P38821 490 aa7.52□□□□□ -1.21
SHO1YER118C XDJ1P39102 459 aa7.52□□□□□ -1.21
SHO1YER118C SAP155P43612 1002 aa7.52□□□□□ -1.21
SHO1YER118C CNN1P43618 361 aa7.52□□□□□ -1.21
SHO1YER118C YJR096WP47137 282 aa7.52□□□□□ -1.21
SHO1YER118C PMT7Q06644 662 aa7.52□□□□□ -1.21
SHO1YER118C RKM4Q12504 494 aa7.52□□□□□ -1.21
SHO1YER118C RPP2BP02400 110 aaKnown RBP7.51□□□□□ -1.21
SHO1YER118C MOD5P07884 428 aa7.51□□□□□ -1.21
SHO1YER118C SRD1P09007 221 aa7.51□□□□□ -1.21
SHO1YER118C HEM13P11353 328 aaKnown RBP7.51□□□□□ -1.21
SHO1YER118C PRP19P32523 503 aaKnown RBP7.51□□□□□ -1.21
SHO1YER118C YEL1P34225 687 aa7.51□□□□□ -1.21
SHO1YER118C UTP7P40055 554 aaKnown RBP7.51□□□□□ -1.21
SHO1YER118C UBP6P43593 499 aaKnown RBP7.51□□□□□ -1.21
SHO1YER118C IML2P47031 731 aa7.51□□□□□ -1.21
SHO1YER118C VPS30Q02948 557 aa7.51□□□□□ -1.21
SHO1YER118C PHM6Q05637 104 aa7.51□□□□□ -1.21
SHO1YER118C YTM1Q12024 460 aaPredicted RBP7.51□□□□□ -1.21
SHO1YER118C CDC9P04819 755 aa7.5□□□□□ -1.21
SHO1YER118C STE6P12866 1290 aa7.5□□□□□ -1.21
SHO1YER118C BSD2P38356 321 aa7.5□□□□□ -1.21
SHO1YER118C PAN5P38787 379 aa7.5□□□□□ -1.21
SHO1YER118C OAF1P39720 1047 aaPredicted RBP7.5□□□□□ -1.21
SHO1YER118C DOT6P40059 670 aaKnown RBP7.5□□□□□ -1.21
SHO1YER118C YNL165WP53891 406 aa7.5□□□□□ -1.21
SHO1YER118C NCR1Q12200 1170 aa7.5□□□□□ -1.21
SHO1YER118C HSP82P02829 709 aaKnown RBP7.49□□□□□ -1.21
SHO1YER118C RAD18P10862 487 aa7.49□□□□□ -1.21
SHO1YER118C PCL2P25693 308 aa7.49□□□□□ -1.21
SHO1YER118C DOM34P33309 386 aa7.49□□□□□ -1.21
SHO1YER118C YKL107WP34251 309 aa7.49□□□□□ -1.21
SHO1YER118C PEX5P35056 612 aa7.49□□□□□ -1.21
SHO1YER118C NUP120P35729 1037 aa7.49□□□□□ -1.21
SHO1YER118C YKL050CP35736 922 aa7.49□□□□□ -1.21
SHO1YER118C GIP1P38229 639 aa7.49□□□□□ -1.21
SHO1YER118C AIM46P38885 310 aa7.49□□□□□ -1.21
SHO1YER118C SAH1P39954 449 aaKnown RBP7.49□□□□□ -1.21
SHO1YER118C NPY1P53164 384 aa7.49□□□□□ -1.21
SHO1YER118C PEX13P80667 386 aa7.49□□□□□ -1.21
SHO1YER118C ROD1Q02805 837 aa7.49□□□□□ -1.21
SHO1YER118C CLF1Q12309 687 aaPredicted RBP7.49□□□□□ -1.21
SHO1YER118C PHO81P17442 1178 aa7.48□□□□□ -1.21
SHO1YER118C SFL1P20134 766 aa7.48□□□□□ -1.21
SHO1YER118C MLF3P32047 452 aa7.48□□□□□ -1.21
SHO1YER118C PYC2P32327 1180 aaKnown RBP7.48□□□□□ -1.21
SHO1YER118C YBR284WP38150 797 aa7.48□□□□□ -1.21
SHO1YER118C CKB2P38930 258 aa7.48□□□□□ -1.21
SHO1YER118C SYH1Q02875 849 aaKnown RBP7.48□□□□□ -1.21
SHO1YER118C NOG1Q02892 647 aaKnown RBP7.48□□□□□ -1.21
SHO1YER118C TRS130Q03660 1102 aa7.48□□□□□ -1.21
SHO1YER118C RCF1Q03713 159 aa7.48□□□□□ -1.21
SHO1YER118C TIF35Q04067 274 aaKnown RBP7.48□□□□□ -1.21
SHO1YER118C IRC3Q06683 689 aa7.48□□□□□ -1.21
SHO1YER118C IMH1Q06704 911 aaKnown RBP7.48□□□□□ -1.21
SHO1YER118C SDH5Q08230 162 aa7.48□□□□□ -1.21
SHO1YER118C YPL066WQ12194 479 aa7.48□□□□□ -1.21
SHO1YER118C PRT1P06103 763 aaKnown RBP7.47□□□□□ -1.21
SHO1YER118C MSS18P08593 268 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms