RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	OXR1	Q08952	273 aa		6.77	□□□□□ -1.33
RPC53	YDL150W	TSC11	P40061	1430 aa		6.76	□□□□□ -1.33
RPC53	YDL150W	HXK1	P04806	485 aa	Known RBP	6.76	□□□□□ -1.33
RPC53	YDL150W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.76	□□□□□ -1.33	not detected
RPC53	YDL150W	HSE1	P38753	452 aa		6.76	□□□□□ -1.33
RPC53	YDL150W	UBP5	P39944	805 aa		6.76	□□□□□ -1.33
RPC53	YDL150W	YGL140C	P53120	1219 aa		6.76	□□□□□ -1.33
RPC53	YDL150W	RSA3	Q05942	220 aa	Known RBP	6.76	□□□□□ -1.33
RPC53	YDL150W	CDA2	Q06703	312 aa		6.76	□□□□□ -1.33
RPC53	YDL150W	YOR1	P53049	1477 aa		6.76	□□□□□ -1.33
RPC53	YDL150W	NTE1	Q04958	1679 aa		6.75	□□□□□ -1.33
RPC53	YDL150W	HEM13	P11353	328 aa	Known RBP	6.75	□□□□□ -1.33
RPC53	YDL150W	SAM35	P14693	329 aa		6.75	□□□□□ -1.33
RPC53	YDL150W	SEC23	P15303	768 aa	Known RBP	6.75	□□□□□ -1.33
RPC53	YDL150W	PRO1	P32264	428 aa		6.75	□□□□□ -1.33
RPC53	YDL150W	ASF1	P32447	279 aa		6.75	□□□□□ -1.33
RPC53	YDL150W	SQT1	P35184	431 aa		6.75	□□□□□ -1.33
RPC53	YDL150W	FAA3	P39002	694 aa		6.74	□□□□□ -1.33
RPC53	YDL150W	HRK1	Q08732	759 aa	Known RBP	6.74	□□□□□ -1.33
RPC53	YDL150W	LAP2	Q10740	671 aa		6.74	□□□□□ -1.33
RPC53	YDL150W	VTH1	P40438	1549 aa		6.74	□□□□□ -1.33
RPC53	YDL150W	VTH2	P40890	1549 aa		6.74	□□□□□ -1.33
RPC53	YDL150W	TY1B-JR2	P47100	1755 aa	Known RBP	6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-ER2	Q03619	1755 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-MR1	Q04214	1755 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-MR2	Q04670	1755 aa	Known RBP	6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-LR1	Q12088	1755 aa	Known RBP	6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-NL1	Q12112	1755 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-GR1	Q12141	1755 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	TY1B-BL	Q12490	1755 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	ADD66	P36040	267 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	PTC7	P38797	343 aa		6.73	□□□□□ -1.33
RPC53	YDL150W	PRP43	P53131	767 aa	Known RBP	6.73	□□□□□ -1.33
RPC53	YDL150W	STU1	P38198	1513 aa		6.72	□□□□□ -1.33
RPC53	YDL150W	NUP170	P38181	1502 aa		6.71	□□□□□ -1.33
RPC53	YDL150W	RPO21	P04050	1733 aa	Known RBP	6.71	□□□□□ -1.34
RPC53	YDL150W	TAF13	P11747	167 aa		6.71	□□□□□ -1.34
RPC53	YDL150W	GAS1	P22146	559 aa	Known RBP	6.71	□□□□□ -1.34
RPC53	YDL150W	MDL2	P33311	773 aa		6.71	□□□□□ -1.34
RPC53	YDL150W	YHL012W	P38709	493 aa		6.71	□□□□□ -1.34
RPC53	YDL150W	QNS1	P38795	714 aa	Known RBP	6.71	□□□□□ -1.34
RPC53	YDL150W	IPL1	P38991	367 aa		6.71	□□□□□ -1.34
RPC53	YDL150W	PIC2	P40035	300 aa		6.71	□□□□□ -1.34
RPC53	YDL150W	SRO9	P25567	434 aa	Known RBP	6.7	□□□□□ -1.34
RPC53	YDL150W	RPT1	P33299	467 aa	Known RBP	6.7	□□□□□ -1.34
RPC53	YDL150W	GTS1	P40956	396 aa		6.7	□□□□□ -1.34
RPC53	YDL150W	THI12	P42883	340 aa		6.7	□□□□□ -1.34
RPC53	YDL150W	THI5	P43534	340 aa		6.7	□□□□□ -1.34
RPC53	YDL150W	VPS53	P47061	822 aa		6.7	□□□□□ -1.34
RPC53	YDL150W	THI11	P47183	340 aa		6.7	□□□□□ -1.34
RPC53	YDL150W	THI13	Q07748	340 aa		6.7	□□□□□ -1.34
RPC53	YDL150W	SNT2	P53127	1403 aa		6.69	□□□□□ -1.34
RPC53	YDL150W	MYO4	P32492	1471 aa		6.69	□□□□□ -1.34
RPC53	YDL150W	AFG2	P32794	780 aa		6.69	□□□□□ -1.34
RPC53	YDL150W	YGR122W	P53272	402 aa		6.69	□□□□□ -1.34
RPC53	YDL150W	ATG14	P38270	344 aa		6.68	□□□□□ -1.34
RPC53	YDL150W	MET10	P39692	1035 aa		6.68	□□□□□ -1.34
RPC53	YDL150W	YJL045W	P47052	634 aa		6.68	□□□□□ -1.34
RPC53	YDL150W	YDL177C	Q12257	170 aa		6.68	□□□□□ -1.34
RPC53	YDL150W	THI80	P35202	319 aa		6.67	□□□□□ -1.34
RPC53	YDL150W	NMD3	P38861	518 aa	Known RBP	6.67	□□□□□ -1.34
RPC53	YDL150W	EST2	Q06163	884 aa		6.67	□□□□□ -1.34
RPC53	YDL150W	MCD1	Q12158	566 aa		6.67	□□□□□ -1.34
RPC53	YDL150W	YOR093C	Q12275	1648 aa		6.67	□□□□□ -1.34
RPC53	YDL150W	SNU71	P53207	620 aa	Known RBP	6.66	□□□□□ -1.34
RPC53	YDL150W	YNR063W	P53749	607 aa		6.66	□□□□□ -1.34
RPC53	YDL150W	PRP6	P19735	899 aa	Predicted RBP	6.65	□□□□□ -1.34
RPC53	YDL150W	PRE9	P23638	258 aa	Known RBP	6.65	□□□□□ -1.34
RPC53	YDL150W	YSC84	P32793	468 aa		6.65	□□□□□ -1.34
RPC53	YDL150W	ENT3	P47160	408 aa		6.65	□□□□□ -1.34
RPC53	YDL150W	SPO14	P36126	1683 aa		6.64	□□□□□ -1.35
RPC53	YDL150W	BAP2	P38084	609 aa		6.63	□□□□□ -1.35
RPC53	YDL150W	MRPL22	P53881	309 aa		6.63	□□□□□ -1.35
RPC53	YDL150W	RSC58	Q07979	502 aa		6.63	□□□□□ -1.35
RPC53	YDL150W	ULS1	Q08562	1619 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	SNQ2	P32568	1501 aa	Known RBP	6.62	□□□□□ -1.35
RPC53	YDL150W	YCR015C	P25616	317 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	KIP1	P28742	1111 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	MRPS18	P42847	217 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	POL32	P47110	350 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	GNP1	P48813	663 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	HDA2	Q06629	674 aa		6.62	□□□□□ -1.35
RPC53	YDL150W	RAD2	P07276	1031 aa		6.61	□□□□□ -1.35
RPC53	YDL150W	CYC8	P14922	966 aa		6.61	□□□□□ -1.35
RPC53	YDL150W	MGE1	P38523	228 aa		6.61	□□□□□ -1.35
RPC53	YDL150W	ENV11	P53246	860 aa		6.61	□□□□□ -1.35
RPC53	YDL150W	SIW14	P53965	281 aa		6.61	□□□□□ -1.35
RPC53	YDL150W	ESC8	Q08119	714 aa		6.61	□□□□□ -1.35
RPC53	YDL150W	TRM3	Q07527	1436 aa		6.6	□□□□□ -1.35
RPC53	YDL150W	ETP1	P38748	585 aa	Known RBP	6.6	□□□□□ -1.35
RPC53	YDL150W	RPN3	P40016	523 aa	Known RBP	6.6	□□□□□ -1.35
RPC53	YDL150W	YJR107W	P47145	328 aa		6.6	□□□□□ -1.35
RPC53	YDL150W	RIM8	P53179	542 aa		6.6	□□□□□ -1.35
RPC53	YDL150W	RRP15	Q06511	250 aa	Predicted RBP	6.6	□□□□□ -1.35
RPC53	YDL150W	RCL1	Q08096	367 aa	Predicted RBP	6.6	□□□□□ -1.35
RPC53	YDL150W	PTC5	Q12511	572 aa		6.6	□□□□□ -1.35
RPC53	YDL150W	STH1	P32597	1359 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	DOP1	Q03921	1698 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	SNF5	P18480	905 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	ALG3	P38179	458 aa		6.59	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms