RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	MPH1	P40562	993 aa		7.21	□□□□□ -1.26
RPN5	YDL147W	GIS4	Q04233	774 aa		7.21	□□□□□ -1.26
RPN5	YDL147W	ALG6	Q12001	544 aa	Known RBP	7.21	□□□□□ -1.26
RPN5	YDL147W	ELG1	Q12050	791 aa		7.21	□□□□□ -1.26
RPN5	YDL147W	NOP14	Q99207	810 aa	Known RBP	7.21	□□□□□ -1.26
RPN5	YDL147W	TY4B-P	A0A0B7P3V8	1104 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	SRM1	P21827	482 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	NAR1	P23503	491 aa	Known RBP	7.2	□□□□□ -1.26
RPN5	YDL147W	NFS1	P25374	497 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	SFP1	P32432	683 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	AFG2	P32794	780 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	MAE1	P36013	669 aa	Known RBP	7.2	□□□□□ -1.26
RPN5	YDL147W	GEM1	P39722	662 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	SPP382	Q06411	708 aa	Predicted RBP	7.2	□□□□□ -1.26
RPN5	YDL147W	GNT1	Q12096	491 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	YPL066W	Q12194	479 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	TY4A-H	Q6Q5P6	413 aa		7.2	□□□□□ -1.26
RPN5	YDL147W	GPM1	P00950	247 aa	Known RBP	7.19	□□□□□ -1.26
RPN5	YDL147W	MSH2	P25847	964 aa		7.19	□□□□□ -1.26
RPN5	YDL147W	TOM20	P35180	183 aa		7.19	□□□□□ -1.26
RPN5	YDL147W	PGM2	P37012	569 aa	Known RBP	7.19	□□□□□ -1.26
RPN5	YDL147W	CCC2	P38995	1004 aa		7.19	□□□□□ -1.26
RPN5	YDL147W	SSB1	P11484	613 aa	Known RBP	7.18	□□□□□ -1.26
RPN5	YDL147W	AAR2	P32357	355 aa	Predicted RBP	7.18	□□□□□ -1.26
RPN5	YDL147W	SSB2	P40150	613 aa	Known RBP	7.18	□□□□□ -1.26
RPN5	YDL147W	HSV2	P50079	448 aa	Predicted RBP	7.18	□□□□□ -1.26
RPN5	YDL147W	YGR045C	P53229	120 aa		7.18	□□□□□ -1.26
RPN5	YDL147W	DSE4	P53753	1117 aa		7.18	□□□□□ -1.26
RPN5	YDL147W	DNM1	P54861	757 aa		7.18	□□□□□ -1.26
RPN5	YDL147W	YPL260W	Q08977	551 aa		7.18	□□□□□ -1.26
RPN5	YDL147W	CRP1	P38845	465 aa	Known RBP	7.17	□□□□□ -1.26
RPN5	YDL147W	RTA1	P53047	317 aa		7.17	□□□□□ -1.26
RPN5	YDL147W	YDR306C	Q06640	478 aa		7.17	□□□□□ -1.26
RPN5	YDL147W	NHA1	Q99271	985 aa		7.17	□□□□□ -1.26
RPN5	YDL147W	TOM70	P07213	617 aa	Known RBP	7.16	□□□□□ -1.26
RPN5	YDL147W	ERS1	P17261	260 aa		7.16	□□□□□ -1.26
RPN5	YDL147W	TRK2	P28584	889 aa		7.16	□□□□□ -1.26
RPN5	YDL147W	GRX4	P32642	244 aa		7.16	□□□□□ -1.26
RPN5	YDL147W	QNS1	P38795	714 aa	Known RBP	7.16	□□□□□ -1.26
RPN5	YDL147W	ELA1	P53861	379 aa	Predicted RBP	7.16	□□□□□ -1.26
RPN5	YDL147W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.16	□□□□□ -1.26	not detected
RPN5	YDL147W	UGO1	Q03327	502 aa		7.16	□□□□□ -1.26
RPN5	YDL147W	HBN1	Q96VH4	193 aa		7.16	□□□□□ -1.26
RPN5	YDL147W	DOM34	P33309	386 aa		7.15	□□□□□ -1.26
RPN5	YDL147W	BET3	P36149	193 aa		7.15	□□□□□ -1.26
RPN5	YDL147W	NTG2	Q08214	380 aa		7.15	□□□□□ -1.26
RPN5	YDL147W	YOR223W	Q12015	292 aa		7.15	□□□□□ -1.26
RPN5	YDL147W	RET1	P22276	1149 aa	Known RBP	7.14	□□□□□ -1.27
RPN5	YDL147W	PEX6	P33760	1030 aa		7.14	□□□□□ -1.27
RPN5	YDL147W	SIP5	P40210	489 aa	Known RBP	7.14	□□□□□ -1.27
RPN5	YDL147W	RSA3	Q05942	220 aa	Known RBP	7.14	□□□□□ -1.27
RPN5	YDL147W	GIC2	Q06648	383 aa		7.14	□□□□□ -1.27
RPN5	YDL147W	ADR1	P07248	1323 aa		7.14	□□□□□ -1.27
RPN5	YDL147W	ADE8	P04161	214 aa		7.13	□□□□□ -1.27
RPN5	YDL147W	PPH3	P32345	308 aa		7.13	□□□□□ -1.27
RPN5	YDL147W	HBS1	P32769	611 aa	Known RBP	7.13	□□□□□ -1.27
RPN5	YDL147W	NNK1	P36003	928 aa		7.13	□□□□□ -1.27
RPN5	YDL147W	GDH3	P39708	457 aa		7.13	□□□□□ -1.27
RPN5	YDL147W	KIP3	P53086	805 aa	Known RBP	7.13	□□□□□ -1.27
RPN5	YDL147W	YGR035C	P53222	116 aa		7.13	□□□□□ -1.27
RPN5	YDL147W	DOT1	Q04089	582 aa	Known RBP	7.13	□□□□□ -1.27
RPN5	YDL147W	SPO21	Q12411	609 aa		7.13	□□□□□ -1.27
RPN5	YDL147W	KIP1	P28742	1111 aa		7.12	□□□□□ -1.27
RPN5	YDL147W	YBR284W	P38150	797 aa		7.12	□□□□□ -1.27
RPN5	YDL147W	UBP12	P39538	1254 aa		7.12	□□□□□ -1.27
RPN5	YDL147W	SRP1	Q02821	542 aa	Known RBP	7.12	□□□□□ -1.27
RPN5	YDL147W	DUS3	Q06053	668 aa	Known RBP	7.12	□□□□□ -1.27
RPN5	YDL147W	YEN1	P40028	759 aa		7.11	□□□□□ -1.27
RPN5	YDL147W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.11	□□□□□ -1.27	not detected
RPN5	YDL147W	HLJ1	P48353	224 aa		7.11	□□□□□ -1.27
RPN5	YDL147W	HPF1	Q05164	967 aa		7.11	□□□□□ -1.27
RPN5	YDL147W	YLR257W	Q06146	321 aa	Known RBP	7.11	□□□□□ -1.27
RPN5	YDL147W	HRK1	Q08732	759 aa	Known RBP	7.11	□□□□□ -1.27
RPN5	YDL147W	YER152C	P10356	443 aa		7.1	□□□□□ -1.27
RPN5	YDL147W	RPL8A	P17076	256 aa	Known RBP	7.1	□□□□□ -1.27
RPN5	YDL147W	PNT1	P38969	423 aa		7.1	□□□□□ -1.27
RPN5	YDL147W	TFB2	Q02939	513 aa		7.1	□□□□□ -1.27
RPN5	YDL147W	RPL11A	P0C0W9	174 aa	Known RBP	7.09	□□□□□ -1.27
RPN5	YDL147W	GSY1	P23337	708 aa		7.09	□□□□□ -1.27
RPN5	YDL147W	UBP6	P43593	499 aa	Known RBP	7.09	□□□□□ -1.27
RPN5	YDL147W	YNR029C	P53729	429 aa	Known RBP	7.09	□□□□□ -1.27
RPN5	YDL147W	YPR071W	Q12346	211 aa		7.09	□□□□□ -1.27
RPN5	YDL147W	DPH6	Q12429	685 aa		7.09	□□□□□ -1.27
RPN5	YDL147W	RPL11B	Q3E757	174 aa	Predicted RBP	7.09	□□□□□ -1.27
RPN5	YDL147W	TOP3	P13099	656 aa		7.08	□□□□□ -1.28
RPN5	YDL147W	SMY2	P32909	740 aa	Known RBP	7.08	□□□□□ -1.28
RPN5	YDL147W	RRM3	P38766	723 aa		7.08	□□□□□ -1.28
RPN5	YDL147W	DSS1	P39112	969 aa		7.08	□□□□□ -1.28
RPN5	YDL147W	YJR008W	P47085	338 aa		7.08	□□□□□ -1.28
RPN5	YDL147W	JJJ3	P47138	172 aa		7.08	□□□□□ -1.28
RPN5	YDL147W	PET10	P36139	283 aa		7.07	□□□□□ -1.28
RPN5	YDL147W	YRO2	P38079	344 aa		7.07	□□□□□ -1.28
RPN5	YDL147W	GPB2	P39717	880 aa		7.07	□□□□□ -1.28
RPN5	YDL147W	SIT1	P39980	628 aa		7.07	□□□□□ -1.28
RPN5	YDL147W	ZDS1	P50111	915 aa	Known RBP	7.07	□□□□□ -1.28
RPN5	YDL147W	MSD1	P15179	658 aa	Known RBP	7.06	□□□□□ -1.28
RPN5	YDL147W	RAD53	P22216	821 aa		7.06	□□□□□ -1.28
RPN5	YDL147W	SAH1	P39954	449 aa	Known RBP	7.06	□□□□□ -1.28
RPN5	YDL147W	RPN3	P40016	523 aa	Known RBP	7.06	□□□□□ -1.28
RPN5	YDL147W	MXR1	P40029	184 aa		7.06	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms