RNA–Protein interactions for RNA: YCL034W

LSB5, Transcript of Protein of unknown function, yeast

Gene LSB5, Length 1,065 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB5	YCL034W	YLR326W	Q06170	240 aa	Known RBP	10.31	□□□□□ -0.76
LSB5	YCL034W	YOR296W	Q08748	1289 aa		10.31	□□□□□ -0.76
LSB5	YCL034W	EUG1	P32474	517 aa		10.3	□□□□□ -0.76
LSB5	YCL034W	ELM1	P32801	640 aa		10.3	□□□□□ -0.76
LSB5	YCL034W	YGR125W	P53273	1036 aa		10.3	□□□□□ -0.76
LSB5	YCL034W	DUS1	P53759	423 aa	Known RBP	10.3	□□□□□ -0.76
LSB5	YCL034W	SMD2	Q06217	110 aa	Known RBP	10.3	□□□□□ -0.76
LSB5	YCL034W	YOL036W	Q08206	761 aa		10.3	□□□□□ -0.76
LSB5	YCL034W	ETT1	Q08421	412 aa	Known RBP	10.3	□□□□□ -0.76
LSB5	YCL034W	AIM44	Q99299	758 aa		10.3	□□□□□ -0.76
LSB5	YCL034W	HXK1	P04806	485 aa	Known RBP	10.29	□□□□□ -0.76
LSB5	YCL034W	SES1	P07284	462 aa	Known RBP	10.29	□□□□□ -0.76
LSB5	YCL034W	ALG1	P16661	449 aa		10.29	□□□□□ -0.76
LSB5	YCL034W	VPS1	P21576	704 aa	Known RBP	10.29	□□□□□ -0.76
LSB5	YCL034W	MSP1	P28737	362 aa		10.29	□□□□□ -0.76
LSB5	YCL034W	UGA4	P32837	571 aa		10.29	□□□□□ -0.76
LSB5	YCL034W	IXR1	P33417	597 aa		10.29	□□□□□ -0.76
LSB5	YCL034W	RFT1	P38206	574 aa	Predicted RBP	10.29	□□□□□ -0.76
LSB5	YCL034W	TMA64	Q04600	565 aa	Known RBP	10.29	□□□□□ -0.76
LSB5	YCL034W	ECM29	P38737	1868 aa		10.29	□□□□□ -0.76
LSB5	YCL034W	SAM1	P10659	382 aa	Known RBP	10.28	□□□□□ -0.76
LSB5	YCL034W	RGP1	P16664	663 aa		10.28	□□□□□ -0.76
LSB5	YCL034W	MCM3	P24279	971 aa	Known RBP	10.28	□□□□□ -0.76
LSB5	YCL034W	UTR4	P32626	227 aa		10.28	□□□□□ -0.76
LSB5	YCL034W	SUL1	P38359	859 aa		10.28	□□□□□ -0.76
LSB5	YCL034W	ATG1	P53104	897 aa		10.28	□□□□□ -0.76
LSB5	YCL034W	DSE4	P53753	1117 aa		10.28	□□□□□ -0.76
LSB5	YCL034W	DMA2	P53924	522 aa		10.28	□□□□□ -0.76
LSB5	YCL034W	OYE2	Q03558	400 aa	Known RBP	10.28	□□□□□ -0.76
LSB5	YCL034W	YLR225C	Q05948	407 aa	Known RBP	10.28	□□□□□ -0.76
LSB5	YCL034W	SLK19	Q08581	821 aa	Known RBP	10.28	□□□□□ -0.76
LSB5	YCL034W	QCR6	P00127	147 aa		10.27	□□□□□ -0.77
LSB5	YCL034W	MCR1	P36060	302 aa	Known RBP	10.27	□□□□□ -0.77
LSB5	YCL034W	STT3	P39007	718 aa	Known RBP	10.27	□□□□□ -0.77
LSB5	YCL034W	CCT5	P40413	562 aa	Known RBP	10.27	□□□□□ -0.77
LSB5	YCL034W	RSM25	P40496	264 aa		10.27	□□□□□ -0.77
LSB5	YCL034W	DJP1	P40564	432 aa		10.27	□□□□□ -0.77
LSB5	YCL034W	RPL22A	P05749	121 aa	Known RBP	10.26	□□□□□ -0.77
LSB5	YCL034W	MBR1	P23493	339 aa		10.26	□□□□□ -0.77
LSB5	YCL034W	DCW1	P36091	449 aa		10.26	□□□□□ -0.77
LSB5	YCL034W	CIR1	P42940	261 aa		10.26	□□□□□ -0.77
LSB5	YCL034W	MFM1	Q02783	413 aa		10.26	□□□□□ -0.77
LSB5	YCL034W	TRS120	Q04183	1289 aa		10.26	□□□□□ -0.77
LSB5	YCL034W	SGD1	Q06132	899 aa		10.26	□□□□□ -0.77
LSB5	YCL034W	ISA1	Q07821	250 aa	Predicted RBP	10.26	□□□□□ -0.77
LSB5	YCL034W	DDP1	Q99321	188 aa	Known RBP	10.26	□□□□□ -0.77
LSB5	YCL034W	SEC8	P32855	1065 aa		10.25	□□□□□ -0.77
LSB5	YCL034W	ISW1	P38144	1129 aa		10.25	□□□□□ -0.77
LSB5	YCL034W	NDT80	P38830	627 aa		10.25	□□□□□ -0.77
LSB5	YCL034W	MXR1	P40029	184 aa		10.25	□□□□□ -0.77
LSB5	YCL034W	CIT3	P43635	486 aa		10.25	□□□□□ -0.77
LSB5	YCL034W	CUE3	P53137	624 aa	Known RBP	10.25	□□□□□ -0.77
LSB5	YCL034W	BUL2	Q03758	920 aa	Known RBP	10.25	□□□□□ -0.77
LSB5	YCL034W	EIS1	Q05050	843 aa	Known RBP	10.25	□□□□□ -0.77
LSB5	YCL034W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	10.24	□□□□□ -0.77	not detected
LSB5	YCL034W	URA1	P28272	314 aa	Predicted RBP	10.24	□□□□□ -0.77
LSB5	YCL034W	RRD1	P40454	393 aa	Known RBP	10.24	□□□□□ -0.77
LSB5	YCL034W	DAK2	P43550	591 aa		10.24	□□□□□ -0.77
LSB5	YCL034W	NCS6	P53088	359 aa		10.24	□□□□□ -0.77
LSB5	YCL034W	CNM67	P53865	581 aa	Known RBP	10.24	□□□□□ -0.77
LSB5	YCL034W	PTA1	Q01329	785 aa	Predicted RBP	10.24	□□□□□ -0.77
LSB5	YCL034W	DUS3	Q06053	668 aa	Known RBP	10.24	□□□□□ -0.77
LSB5	YCL034W	MMR1	Q06324	491 aa		10.24	□□□□□ -0.77
LSB5	YCL034W	OXR1	Q08952	273 aa		10.24	□□□□□ -0.77
LSB5	YCL034W	RKM4	Q12504	494 aa		10.24	□□□□□ -0.77
LSB5	YCL034W	PTC5	Q12511	572 aa		10.24	□□□□□ -0.77
LSB5	YCL034W	GSY1	P23337	708 aa		10.23	□□□□□ -0.77
LSB5	YCL034W	ROX1	P25042	368 aa		10.23	□□□□□ -0.77
LSB5	YCL034W	BMH1	P29311	267 aa	Known RBP	10.23	□□□□□ -0.77
LSB5	YCL034W	SRP40	P32583	406 aa	Predicted RBP	10.23	□□□□□ -0.77
LSB5	YCL034W	SNF7	P39929	240 aa	Known RBP	10.23	□□□□□ -0.77
LSB5	YCL034W	YGR153W	P48238	217 aa		10.23	□□□□□ -0.77
LSB5	YCL034W	HUL5	P53119	910 aa		10.23	□□□□□ -0.77
LSB5	YCL034W	SDA1	P53313	767 aa	Known RBP	10.23	□□□□□ -0.77
LSB5	YCL034W	AIM33	Q04516	312 aa		10.23	□□□□□ -0.77
LSB5	YCL034W	ARP6	Q12509	438 aa		10.23	□□□□□ -0.77
LSB5	YCL034W	FRS2	P15625	503 aa	Known RBP	10.22	□□□□□ -0.77
LSB5	YCL034W	TKL1	P23254	680 aa	Known RBP	10.22	□□□□□ -0.77
LSB5	YCL034W	CLB5	P30283	435 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	MCM4	P30665	933 aa	Known RBP	10.22	□□□□□ -0.77
LSB5	YCL034W	RGT1	P32862	1170 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	PGM1	P33401	570 aa	Known RBP	10.22	□□□□□ -0.77
LSB5	YCL034W	SHP1	P34223	423 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	YKT6	P36015	200 aa	Known RBP	10.22	□□□□□ -0.77
LSB5	YCL034W	GAA1	P39012	614 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	ATG32	P40458	529 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	ROG3	P43602	733 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	RPS0B	P46654	252 aa	Known RBP	10.22	□□□□□ -0.77
LSB5	YCL034W	ORC4	P54791	529 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	PHM6	Q05637	104 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	MET7	Q08645	548 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	SMC6	Q12749	1114 aa		10.22	□□□□□ -0.77
LSB5	YCL034W	HIS4	P00815	799 aa	Known RBP	10.21	□□□□□ -0.77
LSB5	YCL034W	CKA2	P19454	339 aa		10.21	□□□□□ -0.77
LSB5	YCL034W	ARL1	P38116	183 aa	Known RBP	10.21	□□□□□ -0.77
LSB5	YCL034W	DUS4	Q06063	367 aa		10.21	□□□□□ -0.77
LSB5	YCL034W	YLH47	Q06493	454 aa		10.21	□□□□□ -0.77
LSB5	YCL034W	APC11	Q12157	165 aa		10.21	□□□□□ -0.77
LSB5	YCL034W	ERP3	Q12403	225 aa		10.21	□□□□□ -0.77
LSB5	YCL034W	FOB1	O13329	566 aa		10.2	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms