RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W MPH1P40562 993 aa4.34□□□□□ -1.71
DPB3YBR278W YGL176CP46945 554 aa4.34□□□□□ -1.71
DPB3YBR278W UTP8P53276 713 aaKnown RBP4.34□□□□□ -1.71
DPB3YBR278W TAF8Q03750 510 aa4.34□□□□□ -1.71
DPB3YBR278W UTP14Q04500 899 aaKnown RBP4.34□□□□□ -1.71
DPB3YBR278W UBX5Q06682 500 aa4.34□□□□□ -1.71
DPB3YBR278W SLP1Q12232 587 aa4.34□□□□□ -1.71
DPB3YBR278W TSR4P25040 408 aa4.33□□□□□ -1.72
DPB3YBR278W ATG14P38270 344 aa4.33□□□□□ -1.72
DPB3YBR278W RGD1P38339 666 aa4.33□□□□□ -1.72
DPB3YBR278W REI1P38344 393 aaPredicted RBP4.33□□□□□ -1.72
DPB3YBR278W GIP2P40036 548 aa4.33□□□□□ -1.72
DPB3YBR278W ALR2P43553 858 aa4.33□□□□□ -1.72
DPB3YBR278W SPO74P45819 413 aa4.33□□□□□ -1.72
DPB3YBR278W PRY1P47032 299 aa4.33□□□□□ -1.72
DPB3YBR278W RTA1P53047 317 aa4.33□□□□□ -1.72
DPB3YBR278W NHA1Q99271 985 aa4.33□□□□□ -1.72
DPB3YBR278W ALG14P38242 237 aa4.32□□□□□ -1.72
DPB3YBR278W YAR028WP39548 234 aa4.32□□□□□ -1.72
DPB3YBR278W MBP1P39678 833 aa4.32□□□□□ -1.72
DPB3YBR278W POL5P39985 1022 aaKnown RBP4.32□□□□□ -1.72
DPB3YBR278W MSH4P40965 878 aaPredicted RBP4.32□□□□□ -1.72
DPB3YBR278W HUL4P40985 892 aa4.32□□□□□ -1.72
DPB3YBR278W YGL081WP53156 320 aa4.32□□□□□ -1.72
DPB3YBR278W YNR063WP53749 607 aa4.32□□□□□ -1.72
DPB3YBR278W ELG1Q12050 791 aa4.32□□□□□ -1.72
DPB3YBR278W GNT1Q12096 491 aa4.32□□□□□ -1.72
DPB3YBR278W SAC7P17121 654 aa4.31□□□□□ -1.72
DPB3YBR278W ERS1P17261 260 aa4.31□□□□□ -1.72
DPB3YBR278W MLS1P30952 554 aa4.31□□□□□ -1.72
DPB3YBR278W BET3P36149 193 aa4.31□□□□□ -1.72
DPB3YBR278W PGM2P37012 569 aaKnown RBP4.31□□□□□ -1.72
DPB3YBR278W SIP5P40210 489 aaKnown RBP4.31□□□□□ -1.72
DPB3YBR278W YDL124WQ07551 312 aaKnown RBP4.31□□□□□ -1.72
DPB3YBR278W PTC5Q12511 572 aa4.31□□□□□ -1.72
DPB3YBR278W MSH2P25847 964 aa4.3□□□□□ -1.72
DPB3YBR278W HBS1P32769 611 aaKnown RBP4.3□□□□□ -1.72
DPB3YBR278W MAC1P35192 417 aa4.3□□□□□ -1.72
DPB3YBR278W CCC2P38995 1004 aa4.3□□□□□ -1.72
DPB3YBR278W VPS53P47061 822 aa4.3□□□□□ -1.72
DPB3YBR278W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72 RIP-Chip
DPB3YBR278W YMR074CQ04773 145 aa4.3□□□□□ -1.72
DPB3YBR278W NTG2Q08214 380 aa4.3□□□□□ -1.72
DPB3YBR278W LAP2Q10740 671 aa4.3□□□□□ -1.72
DPB3YBR278W ALG6Q12001 544 aaKnown RBP4.3□□□□□ -1.72
DPB3YBR278W YLL054CQ12244 843 aa4.3□□□□□ -1.72
DPB3YBR278W NOP14Q99207 810 aaKnown RBP4.3□□□□□ -1.72
DPB3YBR278W GRX4P32642 244 aa4.29□□□□□ -1.72
DPB3YBR278W HSE1P38753 452 aa4.29□□□□□ -1.72
DPB3YBR278W TPO2P53283 614 aa4.29□□□□□ -1.72
DPB3YBR278W YPL034WQ03083 165 aa4.29□□□□□ -1.72
DPB3YBR278W AVO1Q08236 1176 aa4.29□□□□□ -1.72
DPB3YBR278W SSB1P11484 613 aaKnown RBP4.28□□□□□ -1.72
DPB3YBR278W SRM1P21827 482 aa4.28□□□□□ -1.72
DPB3YBR278W SSB2P40150 613 aaKnown RBP4.28□□□□□ -1.72
DPB3YBR278W GUS1P46655 708 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
DPB3YBR278W MAL11P53048 616 aa4.28□□□□□ -1.72
DPB3YBR278W YGR045CP53229 120 aa4.28□□□□□ -1.72
DPB3YBR278W RSA3Q05942 220 aaKnown RBP4.28□□□□□ -1.72
DPB3YBR278W SPP382Q06411 708 aaPredicted RBP4.28□□□□□ -1.72
DPB3YBR278W YPL260WQ08977 551 aa4.28□□□□□ -1.72
DPB3YBR278W YOR223WQ12015 292 aa4.28□□□□□ -1.72
DPB3YBR278W NFS1P25374 497 aa4.27□□□□□ -1.73
DPB3YBR278W CDC11P32458 415 aa4.27□□□□□ -1.73
DPB3YBR278W MAE1P36013 669 aaKnown RBP4.27□□□□□ -1.73
DPB3YBR278W QNS1P38795 714 aaKnown RBP4.27□□□□□ -1.73
DPB3YBR278W UBP12P39538 1254 aa4.27□□□□□ -1.73
DPB3YBR278W ELA1P53861 379 aaPredicted RBP4.27□□□□□ -1.73
DPB3YBR278W YDR306CQ06640 478 aa4.27□□□□□ -1.73
DPB3YBR278W SPO21Q12411 609 aa4.27□□□□□ -1.73
DPB3YBR278W HBN1Q96VH4 193 aa4.27□□□□□ -1.73
DPB3YBR278W ADR1P07248 1323 aa4.26□□□□□ -1.73
DPB3YBR278W TY4B-PA0A0B7P3V8 1104 aa4.26□□□□□ -1.73
DPB3YBR278W TOM70P07213 617 aaKnown RBP4.26□□□□□ -1.73
DPB3YBR278W YER152CP10356 443 aa4.26□□□□□ -1.73
DPB3YBR278W TOP3P13099 656 aa4.26□□□□□ -1.73
DPB3YBR278W PNT1P38969 423 aa4.26□□□□□ -1.73
DPB3YBR278W GDH3P39708 457 aa4.26□□□□□ -1.73
DPB3YBR278W HSV2P50079 448 aaPredicted RBP4.26□□□□□ -1.73
DPB3YBR278W KIP3P53086 805 aaKnown RBP4.26□□□□□ -1.73
DPB3YBR278W BUD9P53226 547 aa4.26□□□□□ -1.73
DPB3YBR278W UGO1Q03327 502 aa4.26□□□□□ -1.73
DPB3YBR278W DOT1Q04089 582 aaKnown RBP4.26□□□□□ -1.73
DPB3YBR278W GIC2Q06648 383 aa4.26□□□□□ -1.73
DPB3YBR278W TY4A-HQ6Q5P6 413 aa4.26□□□□□ -1.73
DPB3YBR278W MSD1P15179 658 aaKnown RBP4.25□□□□□ -1.73
DPB3YBR278W RPL8AP17076 256 aaKnown RBP4.25□□□□□ -1.73
DPB3YBR278W KIP1P28742 1111 aa4.25□□□□□ -1.73
DPB3YBR278W AAR2P32357 355 aaPredicted RBP4.25□□□□□ -1.73
DPB3YBR278W SCT1P32784 759 aa4.25□□□□□ -1.73
DPB3YBR278W TOM20P35180 183 aa4.25□□□□□ -1.73
DPB3YBR278W YBR284WP38150 797 aa4.25□□□□□ -1.73
DPB3YBR278W CRP1P38845 465 aaKnown RBP4.25□□□□□ -1.73
DPB3YBR278W GPB2P39717 880 aa4.25□□□□□ -1.73
DPB3YBR278W SIT1P39980 628 aa4.25□□□□□ -1.73
DPB3YBR278W DSE4P53753 1117 aa4.25□□□□□ -1.73
DPB3YBR278W ALO1P54783 526 aaKnown RBP4.25□□□□□ -1.73
DPB3YBR278W DNM1P54861 757 aa4.25□□□□□ -1.73
DPB3YBR278W DUS3Q06053 668 aaKnown RBP4.25□□□□□ -1.73
DPB3YBR278W YLR257WQ06146 321 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms