RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C MOT2P34909 587 aaKnown RBP5.59□□□□□ -1.51
NPL4YBR170C EXO5P38289 585 aa5.59□□□□□ -1.51
NPL4YBR170C VMA4P22203 233 aaKnown RBP5.58□□□□□ -1.52
NPL4YBR170C MKK2P32491 506 aa5.58□□□□□ -1.52
NPL4YBR170C BET3P36149 193 aa5.58□□□□□ -1.52
NPL4YBR170C ENP1P38333 483 aaKnown RBP5.58□□□□□ -1.52
NPL4YBR170C NOP2P40991 618 aaKnown RBP5.58□□□□□ -1.52
NPL4YBR170C SUB1P54000 292 aaKnown RBP5.58□□□□□ -1.52
NPL4YBR170C BRE4Q07660 1125 aa5.58□□□□□ -1.52
NPL4YBR170C HVG1P0CE11 249 aa5.57□□□□□ -1.52
NPL4YBR170C INO1P11986 533 aa5.57□□□□□ -1.52
NPL4YBR170C IDI1P15496 288 aa5.57□□□□□ -1.52
NPL4YBR170C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
NPL4YBR170C ALR2P43553 858 aa5.57□□□□□ -1.52
NPL4YBR170C YGR130CP53278 816 aa5.57□□□□□ -1.52
NPL4YBR170C TIF35Q04067 274 aaKnown RBP5.57□□□□□ -1.52
NPL4YBR170C RSC2Q06488 889 aa5.57□□□□□ -1.52
NPL4YBR170C PRP9P19736 530 aaKnown RBP5.57□□□□□ -1.52
NPL4YBR170C MRC1P25588 1096 aa5.57□□□□□ -1.52
NPL4YBR170C SFP1P32432 683 aa5.57□□□□□ -1.52
NPL4YBR170C GRX7P38068 203 aa5.57□□□□□ -1.52
NPL4YBR170C PAF1P38351 445 aa5.57□□□□□ -1.52
NPL4YBR170C CTH1P47976 325 aa5.57□□□□□ -1.52
NPL4YBR170C UGO1Q03327 502 aa5.57□□□□□ -1.52
NPL4YBR170C MRP10O75012 95 aa5.56□□□□□ -1.52
NPL4YBR170C PIN4P34217 668 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
NPL4YBR170C FOL1P53848 824 aa5.56□□□□□ -1.52
NPL4YBR170C YPL066WQ12194 479 aa5.56□□□□□ -1.52
NPL4YBR170C RKM4Q12504 494 aa5.56□□□□□ -1.52
NPL4YBR170C TY4B-PA0A0B7P3V8 1104 aa5.55□□□□□ -1.52
NPL4YBR170C YKL077WP36081 392 aa5.55□□□□□ -1.52
NPL4YBR170C TFA2P36145 328 aa5.55□□□□□ -1.52
NPL4YBR170C INP51P40559 946 aaKnown RBP5.55□□□□□ -1.52
NPL4YBR170C MTR4P47047 1073 aaKnown RBP5.55□□□□□ -1.52
NPL4YBR170C YJR124CP47159 448 aa5.55□□□□□ -1.52
NPL4YBR170C HSV2P50079 448 aaPredicted RBP5.55□□□□□ -1.52
NPL4YBR170C MAL11P53048 616 aa5.55□□□□□ -1.52
NPL4YBR170C BIO5P53744 561 aaKnown RBP5.55□□□□□ -1.52
NPL4YBR170C TFB2Q02939 513 aa5.55□□□□□ -1.52
NPL4YBR170C EST2Q06163 884 aa5.55□□□□□ -1.52
NPL4YBR170C ATG13Q06628 738 aa5.55□□□□□ -1.52
NPL4YBR170C YDL124WQ07551 312 aaKnown RBP5.55□□□□□ -1.52
NPL4YBR170C TY4A-HQ6Q5P6 413 aa5.55□□□□□ -1.52
NPL4YBR170C DED1P06634 604 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C TY1A-LR4P0C2I8 440 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C TY1A-DR6P0CX70 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-ER1P0CX71 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-LR2P0CX72 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-PLP0CX73 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-JR1P0CX74 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-LR3P0CX75 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-ML2P0CX76 440 aa5.54□□□□□ -1.52
NPL4YBR170C SYP1P25623 870 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C PMC1P38929 1173 aaPredicted RBP5.54□□□□□ -1.52
NPL4YBR170C MBP1P39678 833 aa5.54□□□□□ -1.52
NPL4YBR170C GDH3P39708 457 aa5.54□□□□□ -1.52
NPL4YBR170C TED1P40533 473 aa5.54□□□□□ -1.52
NPL4YBR170C YJL181WP46987 611 aa5.54□□□□□ -1.52
NPL4YBR170C RAT1Q02792 1006 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C TY1A-GR1Q12085 440 aa5.54□□□□□ -1.52
NPL4YBR170C TY1A-NL1Q12391 440 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C TY1A-OLQ92392 440 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
NPL4YBR170C HTS1P07263 546 aaKnown RBP5.54□□□□□ -1.52
NPL4YBR170C PEX6P33760 1030 aa5.54□□□□□ -1.52
NPL4YBR170C YKL107WP34251 309 aa5.54□□□□□ -1.52
NPL4YBR170C AKR1P39010 764 aa5.54□□□□□ -1.52
NPL4YBR170C GIP2P40036 548 aa5.54□□□□□ -1.52
NPL4YBR170C YGL176CP46945 554 aa5.54□□□□□ -1.52
NPL4YBR170C DSE4P53753 1117 aa5.54□□□□□ -1.52
NPL4YBR170C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
NPL4YBR170C YNR065CP53751 1116 aa5.53□□□□□ -1.52
NPL4YBR170C DBP5P20449 482 aaKnown RBP5.52□□□□□ -1.53
NPL4YBR170C HBS1P32769 611 aaKnown RBP5.52□□□□□ -1.53
NPL4YBR170C ADD66P36040 267 aa5.52□□□□□ -1.53
NPL4YBR170C NEM1P38757 446 aa5.52□□□□□ -1.53
NPL4YBR170C GEM1P39722 662 aa5.52□□□□□ -1.53
NPL4YBR170C SNF7P39929 240 aaKnown RBP5.52□□□□□ -1.53
NPL4YBR170C CNN1P43618 361 aa5.52□□□□□ -1.53
NPL4YBR170C HLJ1P48353 224 aa5.52□□□□□ -1.53
NPL4YBR170C UTP5Q04177 643 aaKnown RBP5.52□□□□□ -1.53
NPL4YBR170C GIC2Q06648 383 aa5.52□□□□□ -1.53
NPL4YBR170C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
NPL4YBR170C HBN1Q96VH4 193 aa5.52□□□□□ -1.53
NPL4YBR170C CYC7P00045 113 aa5.51□□□□□ -1.53
NPL4YBR170C CCC2P38995 1004 aa5.51□□□□□ -1.53
NPL4YBR170C FET4P40988 552 aa5.51□□□□□ -1.53
NPL4YBR170C SPO74P45819 413 aa5.51□□□□□ -1.53
NPL4YBR170C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
NPL4YBR170C YGR237CP50089 785 aa5.51□□□□□ -1.53
NPL4YBR170C VPS72Q03388 795 aa5.51□□□□□ -1.53
NPL4YBR170C BUD21Q08492 214 aaPredicted RBP5.51□□□□□ -1.53
NPL4YBR170C SOG2Q08817 791 aa5.51□□□□□ -1.53
NPL4YBR170C SEC6P32844 805 aa5.51□□□□□ -1.53
NPL4YBR170C MCM7P38132 845 aa5.51□□□□□ -1.53
NPL4YBR170C SLS1P42900 643 aa5.51□□□□□ -1.53
NPL4YBR170C PEX8P53248 589 aa5.51□□□□□ -1.53
NPL4YBR170C SOK2P53438 785 aaPredicted RBP5.51□□□□□ -1.53
NPL4YBR170C YNL193WP53870 558 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms