RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C SGD1Q06132 899 aa4.86□□□□□ -1.63
RPB5YBR154C RCL1Q08096 367 aaPredicted RBP4.86□□□□□ -1.63
RPB5YBR154C RAD2P07276 1031 aa4.85□□□□□ -1.63
RPB5YBR154C SEN54Q02825 467 aaPredicted RBP4.85□□□□□ -1.63
RPB5YBR154C SEC8P32855 1065 aa4.84□□□□□ -1.63
RPB5YBR154C RGD1P38339 666 aa4.84□□□□□ -1.63
RPB5YBR154C LAM1P38851 1228 aa4.84□□□□□ -1.63
RPB5YBR154C ROD1Q02805 837 aa4.84□□□□□ -1.63
RPB5YBR154C CLU1Q03690 1277 aaKnown RBP4.84□□□□□ -1.63
RPB5YBR154C GSF2Q04697 403 aaKnown RBP4.84□□□□□ -1.63
RPB5YBR154C CYC1P00044 109 aaPredicted RBP4.83□□□□□ -1.64
RPB5YBR154C CYC8P14922 966 aa4.83□□□□□ -1.64
RPB5YBR154C SNF5P18480 905 aa4.83□□□□□ -1.64
RPB5YBR154C PRE10P21242 288 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
RPB5YBR154C MKK2P32491 506 aa4.83□□□□□ -1.64
RPB5YBR154C RFC5P38251 354 aa4.83□□□□□ -1.64
RPB5YBR154C SPT20P50875 604 aa4.83□□□□□ -1.64
RPB5YBR154C RAT1Q02792 1006 aaKnown RBP4.83□□□□□ -1.64
RPB5YBR154C GCN5Q03330 439 aa4.83□□□□□ -1.64
RPB5YBR154C RSM24Q03976 319 aa4.83□□□□□ -1.64
RPB5YBR154C MRL1Q06815 381 aa4.83□□□□□ -1.64
RPB5YBR154C SYP1P25623 870 aaKnown RBP4.82□□□□□ -1.64
RPB5YBR154C MEF2P39677 819 aa4.82□□□□□ -1.64
RPB5YBR154C RPS26AP39938 119 aaKnown RBP4.82□□□□□ -1.64
RPB5YBR154C RPS26BP39939 119 aaKnown RBP4.82□□□□□ -1.64
RPB5YBR154C YDR132CQ03900 495 aa4.82□□□□□ -1.64
RPB5YBR154C CNN1P43618 361 aa4.81□□□□□ -1.64
RPB5YBR154C POL32P47110 350 aa4.81□□□□□ -1.64
RPB5YBR154C KIN2P13186 1147 aaKnown RBP4.8□□□□□ -1.64
RPB5YBR154C TAT2P38967 592 aa4.8□□□□□ -1.64
RPB5YBR154C RAD27P26793 382 aa4.79□□□□□ -1.64
RPB5YBR154C DOM34P33309 386 aa4.79□□□□□ -1.64
RPB5YBR154C SHM2P37291 469 aaKnown RBP4.79□□□□□ -1.64
RPB5YBR154C MPT5P39016 859 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
RPB5YBR154C PBP1P53297 722 aaKnown RBP4.79□□□□□ -1.64
RPB5YBR154C ROT1Q03691 256 aa4.79□□□□□ -1.64
RPB5YBR154C DBP5P20449 482 aaKnown RBP4.78□□□□□ -1.64
RPB5YBR154C CTS1P29029 562 aa4.78□□□□□ -1.64
RPB5YBR154C MLS1P30952 554 aa4.78□□□□□ -1.64
RPB5YBR154C HXT13P39924 564 aa4.78□□□□□ -1.64
RPB5YBR154C HXT17P53631 564 aa4.78□□□□□ -1.64
RPB5YBR154C HXT15P54854 567 aa4.78□□□□□ -1.64
RPB5YBR154C ESF1Q06344 628 aaKnown RBP4.78□□□□□ -1.64
RPB5YBR154C RXT3Q07458 294 aa4.78□□□□□ -1.64
RPB5YBR154C SVS1Q12254 260 aa4.78□□□□□ -1.64
RPB5YBR154C TUB2P02557 457 aaKnown RBP4.77□□□□□ -1.65
RPB5YBR154C YER152CP10356 443 aa4.77□□□□□ -1.65
RPB5YBR154C CMP2P14747 604 aa4.77□□□□□ -1.65
RPB5YBR154C ABZ1P37254 787 aaPredicted RBP4.77□□□□□ -1.65
RPB5YBR154C GNP1P48813 663 aa4.77□□□□□ -1.65
RPB5YBR154C GAL10P04397 699 aa4.76□□□□□ -1.65
RPB5YBR154C GCR1P07261 785 aa4.76□□□□□ -1.65
RPB5YBR154C YJR107WP47145 328 aa4.76□□□□□ -1.65
RPB5YBR154C APL1P27351 700 aa4.75□□□□□ -1.65
RPB5YBR154C MCM2P29469 868 aa4.75□□□□□ -1.65
RPB5YBR154C TAF7Q05021 590 aa4.75□□□□□ -1.65
RPB5YBR154C DUS4Q06063 367 aa4.75□□□□□ -1.65
RPB5YBR154C URN1Q06525 465 aaKnown RBP4.75□□□□□ -1.65
RPB5YBR154C ATG13Q06628 738 aa4.75□□□□□ -1.65
RPB5YBR154C RTT10Q08924 1013 aa4.75□□□□□ -1.65
RPB5YBR154C TMA46Q12000 345 aaKnown RBP4.75□□□□□ -1.65
RPB5YBR154C BAS1P22035 811 aa4.74□□□□□ -1.65
RPB5YBR154C ASF1P32447 279 aa4.74□□□□□ -1.65
RPB5YBR154C PEP7P32609 515 aa4.74□□□□□ -1.65
RPB5YBR154C MCM7P38132 845 aa4.74□□□□□ -1.65
RPB5YBR154C MPH1P40562 993 aa4.74□□□□□ -1.65
RPB5YBR154C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
RPB5YBR154C RMD1Q03441 430 aa4.74□□□□□ -1.65
RPB5YBR154C PLB2Q03674 706 aa4.74□□□□□ -1.65
RPB5YBR154C SIZ1Q04195 904 aa4.74□□□□□ -1.65
RPB5YBR154C SPR28Q04921 423 aa4.74□□□□□ -1.65
RPB5YBR154C ACK1Q07622 623 aaPredicted RBP4.74□□□□□ -1.65
RPB5YBR154C GPB1Q08886 897 aa4.74□□□□□ -1.65
RPB5YBR154C GNT1Q12096 491 aa4.74□□□□□ -1.65
RPB5YBR154C THS1P04801 734 aaKnown RBP4.73□□□□□ -1.65
RPB5YBR154C ATE1P16639 503 aa4.73□□□□□ -1.65
RPB5YBR154C STE11P23561 717 aa4.73□□□□□ -1.65
RPB5YBR154C HEM3P28789 327 aa4.73□□□□□ -1.65
RPB5YBR154C YFL054CP43549 646 aa4.73□□□□□ -1.65
RPB5YBR154C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
RPB5YBR154C ACM1Q08981 209 aa4.73□□□□□ -1.65
RPB5YBR154C SRM1P21827 482 aa4.72□□□□□ -1.65
RPB5YBR154C CDC20P26309 610 aa4.72□□□□□ -1.65
RPB5YBR154C RRT14P40470 206 aa4.72□□□□□ -1.65
RPB5YBR154C TIF35Q04067 274 aaKnown RBP4.72□□□□□ -1.65
RPB5YBR154C PNS1Q12412 539 aa4.72□□□□□ -1.65
RPB5YBR154C TRM2P33753 639 aa4.71□□□□□ -1.66
RPB5YBR154C RER2P35196 286 aa4.71□□□□□ -1.66
RPB5YBR154C UGA2P38067 497 aa4.71□□□□□ -1.66
RPB5YBR154C GEM1P39722 662 aa4.71□□□□□ -1.66
RPB5YBR154C FYV10P40492 516 aa4.71□□□□□ -1.66
RPB5YBR154C MNN10P50108 393 aaKnown RBP4.71□□□□□ -1.66
RPB5YBR154C RIB2Q12362 591 aaKnown RBP4.71□□□□□ -1.66
RPB5YBR154C RPL11AP0C0W9 174 aaKnown RBP4.7□□□□□ -1.66
RPB5YBR154C ACE2P21192 770 aa4.7□□□□□ -1.66
RPB5YBR154C MSC2Q03455 724 aa4.7□□□□□ -1.66
RPB5YBR154C RPL11BQ3E757 174 aaPredicted RBP4.7□□□□□ -1.66
RPB5YBR154C RPP2AP05319 106 aaKnown RBP4.69□□□□□ -1.66
RPB5YBR154C HCM1P25364 564 aa4.69□□□□□ -1.66
RPB5YBR154C MXR1P40029 184 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms