RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W RPS26BP39939 119 aaKnown RBP5.61□□□□□ -1.51
SIF2YBR103W CWC24P53769 259 aa5.61□□□□□ -1.51
SIF2YBR103W IRC4Q03036 179 aa5.61□□□□□ -1.51
SIF2YBR103W TLG1Q03322 224 aa5.61□□□□□ -1.51
SIF2YBR103W CDC53Q12018 815 aaKnown RBP5.61□□□□□ -1.51
SIF2YBR103W HIF1Q12373 385 aa5.61□□□□□ -1.51
SIF2YBR103W YOR131CQ12486 218 aa5.61□□□□□ -1.51
SIF2YBR103W FLO11P08640 1367 aa5.6□□□□□ -1.51
SIF2YBR103W MED8P38304 223 aa5.6□□□□□ -1.51
SIF2YBR103W YNG2P38806 282 aaKnown RBP5.6□□□□□ -1.51
SIF2YBR103W RRN7P40992 514 aa5.6□□□□□ -1.51
SIF2YBR103W TFG1P41895 735 aaPredicted RBP5.6□□□□□ -1.51
SIF2YBR103W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SIF2YBR103W HAP5Q02516 242 aa5.6□□□□□ -1.51
SIF2YBR103W TRM44Q02648 567 aaKnown RBP5.6□□□□□ -1.51
SIF2YBR103W OXR1Q08952 273 aa5.6□□□□□ -1.51
SIF2YBR103W YVC1Q12324 675 aa5.6□□□□□ -1.51
SIF2YBR103W ARG82P07250 355 aa5.59□□□□□ -1.51
SIF2YBR103W RPB10P22139 70 aa5.59□□□□□ -1.51
SIF2YBR103W TSR4P25040 408 aa5.59□□□□□ -1.51
SIF2YBR103W TOA1P32773 286 aa5.59□□□□□ -1.51
SIF2YBR103W VPS35P34110 944 aa5.59□□□□□ -1.51
SIF2YBR103W MNR2P35724 969 aa5.59□□□□□ -1.51
SIF2YBR103W CIN4P39110 191 aa5.59□□□□□ -1.51
SIF2YBR103W ECM1P39715 212 aa5.59□□□□□ -1.51
SIF2YBR103W PEA2P40091 420 aa5.59□□□□□ -1.51
SIF2YBR103W SAM37P50110 327 aa5.59□□□□□ -1.51
SIF2YBR103W SPO1P53541 631 aa5.59□□□□□ -1.51
SIF2YBR103W VPS30Q02948 557 aa5.59□□□□□ -1.51
SIF2YBR103W RPN4Q03465 531 aa5.59□□□□□ -1.51
SIF2YBR103W POB3Q04636 552 aaKnown RBP5.59□□□□□ -1.51
SIF2YBR103W ACK1Q07622 623 aaPredicted RBP5.59□□□□□ -1.51
SIF2YBR103W MDM38Q08179 573 aa5.59□□□□□ -1.51
SIF2YBR103W APC11Q12157 165 aa5.59□□□□□ -1.51
SIF2YBR103W GSC2P40989 1895 aa5.59□□□□□ -1.51
SIF2YBR103W SEC18P18759 758 aaKnown RBP5.59□□□□□ -1.52
SIF2YBR103W SAP190P36123 1033 aa5.59□□□□□ -1.52
SIF2YBR103W STV1P37296 890 aa5.59□□□□□ -1.52
SIF2YBR103W RRD1P40454 393 aaKnown RBP5.59□□□□□ -1.52
SIF2YBR103W YIL089WP40500 205 aa5.59□□□□□ -1.52
SIF2YBR103W TOS4Q06266 489 aa5.59□□□□□ -1.52
SIF2YBR103W BUD20Q08004 166 aaPredicted RBP5.59□□□□□ -1.52
SIF2YBR103W BDS1Q08347 646 aa5.59□□□□□ -1.52
SIF2YBR103W NOP14Q99207 810 aaKnown RBP5.59□□□□□ -1.52
SIF2YBR103W PIF1P07271 859 aa5.58□□□□□ -1.52
SIF2YBR103W SWI5P08153 709 aa5.58□□□□□ -1.52
SIF2YBR103W ZUO1P32527 433 aaKnown RBP5.58□□□□□ -1.52
SIF2YBR103W TOM20P35180 183 aa5.58□□□□□ -1.52
SIF2YBR103W UTP7P40055 554 aaKnown RBP5.58□□□□□ -1.52
SIF2YBR103W YFH7P43591 353 aa5.58□□□□□ -1.52
SIF2YBR103W ATG36P46983 293 aa5.58□□□□□ -1.52
SIF2YBR103W YJL171CP46992 396 aa5.58□□□□□ -1.52
SIF2YBR103W JJJ2P46997 583 aa5.58□□□□□ -1.52
SIF2YBR103W TOM1Q03280 3268 aa5.57□□□□□ -1.52
SIF2YBR103W HPR1P17629 752 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W RAD51P25454 400 aa5.57□□□□□ -1.52
SIF2YBR103W KNS1P32350 737 aaPredicted RBP5.57□□□□□ -1.52
SIF2YBR103W SEC61P32915 480 aa5.57□□□□□ -1.52
SIF2YBR103W ETP1P38748 585 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W CIC1P38779 376 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W NAB3P38996 802 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SIF2YBR103W VNX1P42839 908 aa5.57□□□□□ -1.52
SIF2YBR103W GSM1P42950 618 aa5.57□□□□□ -1.52
SIF2YBR103W SUT1P53032 299 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W CDC55Q00362 526 aa5.57□□□□□ -1.52
SIF2YBR103W HOS3Q02959 697 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W APL5Q08951 932 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W LSP1Q12230 341 aaKnown RBP5.57□□□□□ -1.52
SIF2YBR103W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SIF2YBR103W YBL029C-AQ3E756 94 aa5.57□□□□□ -1.52
SIF2YBR103W CYC8P14922 966 aa5.56□□□□□ -1.52
SIF2YBR103W RPS7AP26786 190 aaKnown RBP5.56□□□□□ -1.52
SIF2YBR103W RTG1P32607 177 aa5.56□□□□□ -1.52
SIF2YBR103W PBP2P38151 413 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SIF2YBR103W MTC3P53077 123 aa5.56□□□□□ -1.52
SIF2YBR103W ERV41Q04651 352 aa5.56□□□□□ -1.52
SIF2YBR103W UBX5Q06682 500 aa5.56□□□□□ -1.52
SIF2YBR103W IOC2Q12072 812 aa5.56□□□□□ -1.52
SIF2YBR103W NHA1Q99271 985 aa5.56□□□□□ -1.52
SIF2YBR103W PRT1P06103 763 aaKnown RBP5.56□□□□□ -1.52
SIF2YBR103W SNF3P10870 884 aa5.56□□□□□ -1.52
SIF2YBR103W HSC82P15108 705 aaKnown RBP5.56□□□□□ -1.52
SIF2YBR103W KAR3P17119 729 aa5.56□□□□□ -1.52
SIF2YBR103W CDC11P32458 415 aa5.56□□□□□ -1.52
SIF2YBR103W UTR2P32623 467 aa5.56□□□□□ -1.52
SIF2YBR103W SWH1P35845 1188 aa5.56□□□□□ -1.52
SIF2YBR103W YNL193WP53870 558 aa5.56□□□□□ -1.52
SIF2YBR103W SUB1P54000 292 aaKnown RBP5.56□□□□□ -1.52
SIF2YBR103W ELP4Q02884 456 aaKnown RBP5.56□□□□□ -1.52
SIF2YBR103W SPP1Q03012 353 aa5.56□□□□□ -1.52
SIF2YBR103W VPS72Q03388 795 aa5.56□□□□□ -1.52
SIF2YBR103W COG8Q04632 607 aa5.56□□□□□ -1.52
SIF2YBR103W PUS1Q12211 544 aaKnown RBP5.56□□□□□ -1.52
SIF2YBR103W NCB2Q92317 146 aa5.56□□□□□ -1.52
SIF2YBR103W SPT16P32558 1035 aaKnown RBP5.55□□□□□ -1.52
SIF2YBR103W LCD1Q04377 747 aa5.55□□□□□ -1.52
SIF2YBR103W NOC3Q07896 663 aaPredicted RBP5.55□□□□□ -1.52
SIF2YBR103W YLL054CQ12244 843 aa5.55□□□□□ -1.52
SIF2YBR103W CYB2P00175 591 aa5.54□□□□□ -1.52
SIF2YBR103W CBP1P07252 654 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms