RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PODXL2Q9NZ53 605 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 CKAP2LQ8IYA6 745 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
SCARB2-213ENST00000638680 SSBP05455 408 aaKnown RBP eCLIP21.62■■□□□ 1.05
SCARB2-213ENST00000638680 PIBF1Q8WXW3 757 aa21.62■■□□□ 1.05
SCARB2-213ENST00000638680 GBP3Q9H0R5 595 aa21.62■■□□□ 1.05
SCARB2-213ENST00000638680 SH2B1Q9NRF2 756 aaPredicted RBP21.62■■□□□ 1.05
SCARB2-213ENST00000638680 C16orf45Q96MC5 204 aaPredicted RBP21.61■■□□□ 1.05
SCARB2-213ENST00000638680 CRACR2AQ9BSW2 395 aa21.61■■□□□ 1.05
SCARB2-213ENST00000638680 MPHOSPH8Q99549 860 aa21.61■■□□□ 1.05
SCARB2-213ENST00000638680 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
SCARB2-213ENST00000638680 GDPD2Q9HCC8 539 aa21.61■■□□□ 1.05
SCARB2-213ENST00000638680 CEP131Q9UPN4 1083 aa21.61■■□□□ 1.05
SCARB2-213ENST00000638680 STRN4Q9NRL3 753 aa21.61■■□□□ 1.05
SCARB2-213ENST00000638680 TRMT1Q9NXH9 659 aaKnown RBP21.61■■□□□ 1.05
SCARB2-213ENST00000638680 TROQ12816 1431 aaPredicted RBP21.61■■□□□ 1.05
SCARB2-213ENST00000638680 SPG7Q9UQ90 795 aa21.6■■□□□ 1.05
SCARB2-213ENST00000638680 MEX3CQ5U5Q3 659 aaKnown RBP21.6■■□□□ 1.05
SCARB2-213ENST00000638680 TAF4BQ92750 862 aa21.6■■□□□ 1.05
SCARB2-213ENST00000638680 GNAT3A8MTJ3 354 aa21.6■■□□□ 1.05
SCARB2-213ENST00000638680 ZRSR2Q15696 482 aaKnown RBP21.6■■□□□ 1.05
SCARB2-213ENST00000638680 RBM27Q9P2N5 1060 aaKnown RBP21.6■■□□□ 1.05
SCARB2-213ENST00000638680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.59■■□□□ 1.05
SCARB2-213ENST00000638680 TOP1P11387 765 aaKnown RBP21.59■■□□□ 1.05
SCARB2-213ENST00000638680 KIF5CO60282 957 aa21.59■■□□□ 1.05
SCARB2-213ENST00000638680 ADCY5O95622 1261 aa21.59■■□□□ 1.05
SCARB2-213ENST00000638680 BOLA2Q9H3K6 86 aa21.59■■□□□ 1.05
SCARB2-213ENST00000638680 LIMCH1Q9UPQ0 1083 aa21.59■■□□□ 1.05
SCARB2-213ENST00000638680 IDH1O75874 414 aaKnown RBP21.58■■□□□ 1.05
SCARB2-213ENST00000638680 LARP6Q9BRS8 491 aaKnown RBP21.58■■□□□ 1.05
SCARB2-213ENST00000638680 BMP2KQ9NSY1 1161 aaPredicted RBP21.58■■□□□ 1.05
SCARB2-213ENST00000638680 TBC1D9Q6ZT07 1266 aa21.58■■□□□ 1.05
SCARB2-213ENST00000638680 BAG4O95429 457 aaKnown RBP21.58■■□□□ 1.05
SCARB2-213ENST00000638680 GUCY1B3Q02153 619 aa21.58■■□□□ 1.05
SCARB2-213ENST00000638680 ZNF397Q8NF99 534 aaPredicted RBP21.58■■□□□ 1.05
SCARB2-213ENST00000638680 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
SCARB2-213ENST00000638680 IGHDP01880 384 aa21.58■■□□□ 1.04
SCARB2-213ENST00000638680 PPP4R3BQ5MIZ7 849 aa21.58■■□□□ 1.04
SCARB2-213ENST00000638680 POLR3GO15318 223 aaPredicted RBP21.58■■□□□ 1.04
SCARB2-213ENST00000638680 TRIM27P14373 513 aa21.57■■□□□ 1.04
SCARB2-213ENST00000638680 KLHL10Q6JEL2 608 aa21.57■■□□□ 1.04
SCARB2-213ENST00000638680 KIF4BQ2VIQ3 1234 aa21.57■■□□□ 1.04
SCARB2-213ENST00000638680 TMX1Q9H3N1 280 aa21.57■■□□□ 1.04
SCARB2-213ENST00000638680 AIDAQ96BJ3 306 aa21.57■■□□□ 1.04
SCARB2-213ENST00000638680 CCDC85AQ96PX6 553 aaPredicted RBP21.57■■□□□ 1.04
SCARB2-213ENST00000638680 TBC1D32Q96NH3 1257 aa21.56■■□□□ 1.04
SCARB2-213ENST00000638680 SHTN1A0MZ66 631 aa21.56■■□□□ 1.04
SCARB2-213ENST00000638680 RAI14Q9P0K7 980 aa21.56■■□□□ 1.04
SCARB2-213ENST00000638680 RPGRIP1LQ68CZ1 1315 aa21.56■■□□□ 1.04
SCARB2-213ENST00000638680 ABCC11Q96J66 1382 aa21.56■■□□□ 1.04
SCARB2-213ENST00000638680 ANKRD18AQ8IVF6 992 aa21.56■■□□□ 1.04
SCARB2-213ENST00000638680 MCM5P33992 734 aa21.55■■□□□ 1.04
SCARB2-213ENST00000638680 F6X3S4 739 aa21.55■■□□□ 1.04
SCARB2-213ENST00000638680 SPA17Q15506 151 aa21.55■■□□□ 1.04
SCARB2-213ENST00000638680 CTAGE5O15320 804 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 C8orf76Q96K31 380 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 ZSCAN23Q3MJ62 389 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 GJB2P29033 226 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 JAKMIP3Q5VZ66 844 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 LRP2BPQ9P2M1 347 aa21.54■■□□□ 1.04
SCARB2-213ENST00000638680 MAP9Q49MG5 647 aa21.53■■□□□ 1.04
SCARB2-213ENST00000638680 DDX19AQ9NUU7 478 aaKnown RBP21.53■■□□□ 1.04
SCARB2-213ENST00000638680 SPDYE4A6NLX3 237 aa21.53■■□□□ 1.04
SCARB2-213ENST00000638680 TOM1L2Q6ZVM7 507 aa21.53■■□□□ 1.04
SCARB2-213ENST00000638680 TRERF1Q96PN7 1200 aa21.53■■□□□ 1.04
SCARB2-213ENST00000638680 NEMFO60524 1076 aa21.53■■□□□ 1.04
SCARB2-213ENST00000638680 KLHL40Q2TBA0 621 aa21.53■■□□□ 1.04
SCARB2-213ENST00000638680 NCOA1Q15788 1441 aa21.52■■□□□ 1.04
SCARB2-213ENST00000638680 BMP2KLQ5H9B9 411 aa21.52■■□□□ 1.04
SCARB2-213ENST00000638680 STX6O43752 255 aa21.52■■□□□ 1.03
SCARB2-213ENST00000638680 CALCOCO1Q9P1Z2 691 aa21.52■■□□□ 1.03
SCARB2-213ENST00000638680 PROSER2Q86WR7 435 aaPredicted RBP21.51■■□□□ 1.03
SCARB2-213ENST00000638680 FSIP1Q8NA03 581 aa21.51■■□□□ 1.03
SCARB2-213ENST00000638680 CCDC8Q9H0W5 538 aaPredicted RBP21.51■■□□□ 1.03
SCARB2-213ENST00000638680 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
SCARB2-213ENST00000638680 TMC6Q7Z403 805 aa21.51■■□□□ 1.03
SCARB2-213ENST00000638680 TFIP11Q9UBB9 837 aaKnown RBP21.51■■□□□ 1.03
SCARB2-213ENST00000638680 CPLX3Q8WVH0 158 aa21.51■■□□□ 1.03
SCARB2-213ENST00000638680 ZHX1Q9UKY1 873 aaPredicted RBP21.51■■□□□ 1.03
SCARB2-213ENST00000638680 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
SCARB2-213ENST00000638680 GTF2F1P35269 517 aaKnown RBP eCLIP21.5■■□□□ 1.03
SCARB2-213ENST00000638680 KLHL34Q8N239 644 aa21.5■■□□□ 1.03
SCARB2-213ENST00000638680 NUDT16Q96DE0 195 aaKnown RBP21.5■■□□□ 1.03
SCARB2-213ENST00000638680 HMGB1P09429 215 aaKnown RBP21.49■■□□□ 1.03
SCARB2-213ENST00000638680 GSDMDP57764 484 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 STX1AQ16623 288 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 MCM3P25205 808 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 GBP2P32456 591 aaPredicted RBP21.49■■□□□ 1.03
SCARB2-213ENST00000638680 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
SCARB2-213ENST00000638680 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 GIMAP7Q8NHV1 300 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 UVSSAQ2YD98 709 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 FKBP15Q5T1M5 1219 aa21.49■■□□□ 1.03
SCARB2-213ENST00000638680 METTL24Q5JXM2 366 aa21.48■■□□□ 1.03
SCARB2-213ENST00000638680 NUP88Q99567 741 aaPredicted RBP21.48■■□□□ 1.03
SCARB2-213ENST00000638680 IFIT1P09914 478 aaKnown RBP21.48■■□□□ 1.03
SCARB2-213ENST00000638680 CCT2P78371 535 aaKnown RBP21.48■■□□□ 1.03
SCARB2-213ENST00000638680 CNNM3Q8NE01 707 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms