RNA–Protein interactions for RNA: ENST00000636868.1

ATRX-222, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-222	ENST00000636868	NLRP3	Q96P20	1036 aa		7.51	□□□□□ -1.21
ATRX-222	ENST00000636868	GPSM3	Q9Y4H4	160 aa		7.51	□□□□□ -1.21
ATRX-222	ENST00000636868	PRSS36	Q5K4E3	855 aa		7.5	□□□□□ -1.21
ATRX-222	ENST00000636868	SPATA31C1	P0DKV0	1188 aa		7.49	□□□□□ -1.21
ATRX-222	ENST00000636868	CHSY3	Q70JA7	882 aa		7.49	□□□□□ -1.21
ATRX-222	ENST00000636868	TRIM11	Q96F44	468 aa		7.49	□□□□□ -1.21
ATRX-222	ENST00000636868	ABHD17A	Q96GS6	310 aa		7.49	□□□□□ -1.21
ATRX-222	ENST00000636868	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.49	□□□□□ -1.21
ATRX-222	ENST00000636868	NEURL1B	A8MQ27	555 aa		7.48	□□□□□ -1.21
ATRX-222	ENST00000636868	FGFR3	P22607	806 aa		7.48	□□□□□ -1.21
ATRX-222	ENST00000636868	CTBS	Q01459	385 aa		7.48	□□□□□ -1.21
ATRX-222	ENST00000636868	LRP8	Q14114	963 aa		7.48	□□□□□ -1.21
ATRX-222	ENST00000636868	CLN3	Q13286	438 aa		7.47	□□□□□ -1.21
ATRX-222	ENST00000636868	PPP2R2D	Q66LE6	453 aa		7.47	□□□□□ -1.21
ATRX-222	ENST00000636868	SEPT12	Q8IYM1	358 aa		7.47	□□□□□ -1.21
ATRX-222	ENST00000636868	COBL	O75128	1261 aa		7.46	□□□□□ -1.22
ATRX-222	ENST00000636868	BARGIN	Q6ZT62	677 aa		7.46	□□□□□ -1.22
ATRX-222	ENST00000636868	PLVAP	Q9BX97	442 aa		7.46	□□□□□ -1.22
ATRX-222	ENST00000636868	RUBCNL	Q9H714	662 aa		7.46	□□□□□ -1.22
ATRX-222	ENST00000636868	ARAF	P10398	606 aa		7.45	□□□□□ -1.22
ATRX-222	ENST00000636868	PHKA2	P46019	1235 aa		7.45	□□□□□ -1.22
ATRX-222	ENST00000636868	CLK2	P49760	499 aa	Known RBP	7.45	□□□□□ -1.22
ATRX-222	ENST00000636868	TRIM52	Q96A61	297 aa		7.45	□□□□□ -1.22
ATRX-222	ENST00000636868	HYAL3	O43820	417 aa	Predicted RBP	7.44	□□□□□ -1.22
ATRX-222	ENST00000636868	BNIP3L	O60238	219 aa		7.44	□□□□□ -1.22
ATRX-222	ENST00000636868	LBR	Q14739	615 aa	Known RBP	7.44	□□□□□ -1.22
ATRX-222	ENST00000636868	ARHGEF10L	Q9HCE6	1279 aa		7.44	□□□□□ -1.22
ATRX-222	ENST00000636868		A0A1B0GTH6	734 aa		7.43	□□□□□ -1.22
ATRX-222	ENST00000636868	NDFIP2	Q9NV92	336 aa		7.43	□□□□□ -1.22
ATRX-222	ENST00000636868	CSB-PGBD3	P0DP91	1061 aa		7.42	□□□□□ -1.22
ATRX-222	ENST00000636868	ERVK-9	P63128	1117 aa		7.42	□□□□□ -1.22
ATRX-222	ENST00000636868	CC2D2B	Q6DHV5	1058 aa		7.42	□□□□□ -1.22
ATRX-222	ENST00000636868	MCTP1	Q6DN14	999 aa		7.42	□□□□□ -1.22
ATRX-222	ENST00000636868	PGBD3	Q8N328	593 aa		7.42	□□□□□ -1.22
ATRX-222	ENST00000636868	CYP2U1	Q7Z449	544 aa		7.41	□□□□□ -1.22
ATRX-222	ENST00000636868	ZMYND10	O75800	440 aa		7.4	□□□□□ -1.22
ATRX-222	ENST00000636868	EFHC2	Q5JST6	749 aa		7.4	□□□□□ -1.22
ATRX-222	ENST00000636868	EPS8L1	Q8TE68	723 aa		7.4	□□□□□ -1.22
ATRX-222	ENST00000636868	RAB6B	Q9NRW1	208 aa		7.4	□□□□□ -1.22
ATRX-222	ENST00000636868	GIGYF1	O75420	1035 aa	Predicted RBP	7.39	□□□□□ -1.23
ATRX-222	ENST00000636868	APBA3	O96018	575 aa		7.39	□□□□□ -1.23
ATRX-222	ENST00000636868	SCTR	P47872	440 aa		7.39	□□□□□ -1.23
ATRX-222	ENST00000636868	FCHSD1	Q86WN1	690 aa		7.39	□□□□□ -1.23
ATRX-222	ENST00000636868	ADH6	P28332	368 aa		7.38	□□□□□ -1.23
ATRX-222	ENST00000636868	MSX1	P28360	303 aa		7.38	□□□□□ -1.23
ATRX-222	ENST00000636868	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
ATRX-222	ENST00000636868	KLF15	Q9UIH9	416 aa		7.38	□□□□□ -1.23
ATRX-222	ENST00000636868	TRIM66	O15016	1216 aa		7.37	□□□□□ -1.23
ATRX-222	ENST00000636868	PRRT3	Q5FWE3	981 aa		7.37	□□□□□ -1.23
ATRX-222	ENST00000636868	POLR3E	Q9NVU0	708 aa		7.37	□□□□□ -1.23
ATRX-222	ENST00000636868	FAM229A	H3BQW9	127 aa		7.36	□□□□□ -1.23
ATRX-222	ENST00000636868	YBX3	P16989	372 aa	Known RBP eCLIP	7.36	□□□□□ -1.23
ATRX-222	ENST00000636868	CENPC	Q03188	943 aa		7.35	□□□□□ -1.23
ATRX-222	ENST00000636868	C4orf17	Q53FE4	359 aa		7.35	□□□□□ -1.23
ATRX-222	ENST00000636868	PNMA1	Q8ND90	353 aa		7.35	□□□□□ -1.23
ATRX-222	ENST00000636868	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.35	□□□□□ -1.23
ATRX-222	ENST00000636868	OSBPL3	Q9H4L5	887 aa		7.35	□□□□□ -1.23
ATRX-222	ENST00000636868	SPDYE3	A6NKU9	549 aa		7.34	□□□□□ -1.23
ATRX-222	ENST00000636868	PAX4	O43316	350 aa		7.34	□□□□□ -1.23
ATRX-222	ENST00000636868	IL2RA	P01589	272 aa		7.34	□□□□□ -1.23
ATRX-222	ENST00000636868	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.34	□□□□□ -1.23
ATRX-222	ENST00000636868	CNKSR1	Q969H4	720 aa		7.34	□□□□□ -1.23
ATRX-222	ENST00000636868	KRTAP4-9	Q9BYQ8	210 aa		7.34	□□□□□ -1.23
ATRX-222	ENST00000636868	TRAK2	O60296	914 aa		7.33	□□□□□ -1.24
ATRX-222	ENST00000636868	GNAS	Q5JWF2	1037 aa		7.33	□□□□□ -1.24
ATRX-222	ENST00000636868	ESYT1	Q9BSJ8	1104 aa		7.33	□□□□□ -1.24
ATRX-222	ENST00000636868	HMX1	Q9NP08	348 aa	Predicted RBP	7.33	□□□□□ -1.24
ATRX-222	ENST00000636868	DNAAF2	Q9NVR5	837 aa	Known RBP	7.33	□□□□□ -1.24
ATRX-222	ENST00000636868	PCDHB9	Q9Y5E1	797 aa		7.33	□□□□□ -1.24
ATRX-222	ENST00000636868	H2AFB1	P0C5Y9	115 aa		7.32	□□□□□ -1.24
ATRX-222	ENST00000636868	H2AFB2	P0C5Z0	115 aa		7.32	□□□□□ -1.24
ATRX-222	ENST00000636868	TXK	P42681	527 aa		7.32	□□□□□ -1.24
ATRX-222	ENST00000636868	CRISPLD1	Q9H336	500 aa		7.32	□□□□□ -1.24
ATRX-222	ENST00000636868	HCN2	Q9UL51	889 aa		7.32	□□□□□ -1.24
ATRX-222	ENST00000636868	CD33	P20138	364 aa		7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	PCBP4	P57723	403 aa	Known RBP	7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	TMEM214	Q6NUQ4	689 aa	Known RBP	7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	FIGNL1	Q6PIW4	674 aa		7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	NACC1	Q96RE7	527 aa		7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	AVEN	Q9NQS1	362 aa	Predicted RBP	7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	PCDHGC4	Q9Y5F7	938 aa		7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.31	□□□□□ -1.24
ATRX-222	ENST00000636868	DCDC2B	A2VCK2	349 aa		7.3	□□□□□ -1.24
ATRX-222	ENST00000636868	GRIK4	Q16099	956 aa		7.3	□□□□□ -1.24
ATRX-222	ENST00000636868	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.3	□□□□□ -1.24
ATRX-222	ENST00000636868	HRH3	Q9Y5N1	445 aa		7.3	□□□□□ -1.24
ATRX-222	ENST00000636868	GTF2E1	P29083	439 aa	Predicted RBP	7.29	□□□□□ -1.24
ATRX-222	ENST00000636868	CCDC125	Q86Z20	511 aa		7.29	□□□□□ -1.24
ATRX-222	ENST00000636868	ZC3H15	Q8WU90	426 aa	Known RBP	7.29	□□□□□ -1.24
ATRX-222	ENST00000636868	PCDHB11	Q9Y5F2	797 aa		7.29	□□□□□ -1.24
ATRX-222	ENST00000636868	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.29	□□□□□ -1.24
ATRX-222	ENST00000636868	AP1G2	O75843	785 aa		7.28	□□□□□ -1.24
ATRX-222	ENST00000636868	GNRH1	P01148	92 aa		7.28	□□□□□ -1.24
ATRX-222	ENST00000636868	FAM182B	Q5T319	152 aa		7.28	□□□□□ -1.24
ATRX-222	ENST00000636868	FMNL2	Q96PY5	1086 aa		7.28	□□□□□ -1.24
ATRX-222	ENST00000636868	ATXN7	O15265	892 aa	Predicted RBP	7.27	□□□□□ -1.25
ATRX-222	ENST00000636868	MAPT	P10636	758 aa	Known RBP	7.27	□□□□□ -1.25
ATRX-222	ENST00000636868	ELN	P15502	786 aa		7.27	□□□□□ -1.25
ATRX-222	ENST00000636868	PLCB2	Q00722	1185 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 205.7 ms