RNA–Protein interactions for RNA: ENST00000636868.1

ATRX-222, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-222ENST00000636868 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
ATRX-222ENST00000636868 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
ATRX-222ENST00000636868 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
ATRX-222ENST00000636868 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
ATRX-222ENST00000636868 FOXD1Q16676 465 aa20.84■□□□□ 0.93
ATRX-222ENST00000636868 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
ATRX-222ENST00000636868 MSH5O43196 834 aa19.72■□□□□ 0.75
ATRX-222ENST00000636868 PIAS4Q8N2W9 510 aaPredicted RBP19.33■□□□□ 0.68
ATRX-222ENST00000636868 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
ATRX-222ENST00000636868 ADRA2BP18089 450 aa18.89■□□□□ 0.61
ATRX-222ENST00000636868 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
ATRX-222ENST00000636868 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
ATRX-222ENST00000636868 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
ATRX-222ENST00000636868 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
ATRX-222ENST00000636868 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
ATRX-222ENST00000636868 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
ATRX-222ENST00000636868 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
ATRX-222ENST00000636868 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
ATRX-222ENST00000636868 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
ATRX-222ENST00000636868 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
ATRX-222ENST00000636868 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
ATRX-222ENST00000636868 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
ATRX-222ENST00000636868 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
ATRX-222ENST00000636868 POTEHQ6S545 545 aa15.86■□□□□ 0.13
ATRX-222ENST00000636868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
ATRX-222ENST00000636868 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
ATRX-222ENST00000636868 DSG3P32926 999 aa15.5■□□□□ 0.07
ATRX-222ENST00000636868 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
ATRX-222ENST00000636868 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
ATRX-222ENST00000636868 CAPN15O75808 1086 aa15.45■□□□□ 0.06
ATRX-222ENST00000636868 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
ATRX-222ENST00000636868 ABCB7O75027 752 aa15.07■□□□□ 0
ATRX-222ENST00000636868 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
ATRX-222ENST00000636868 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
ATRX-222ENST00000636868 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
ATRX-222ENST00000636868 APLP2Q06481 763 aa14.89□□□□□ -0.03
ATRX-222ENST00000636868 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
ATRX-222ENST00000636868 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
ATRX-222ENST00000636868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
ATRX-222ENST00000636868 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
ATRX-222ENST00000636868 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
ATRX-222ENST00000636868 KCNA4P22459 653 aa14.56□□□□□ -0.08
ATRX-222ENST00000636868 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
ATRX-222ENST00000636868 POLA2Q14181 598 aa14.47□□□□□ -0.09
ATRX-222ENST00000636868 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
ATRX-222ENST00000636868 PIP4P2Q8N4L2 257 aa14.27□□□□□ -0.13
ATRX-222ENST00000636868 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
ATRX-222ENST00000636868 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
ATRX-222ENST00000636868 HAX1O00165 279 aa14.18□□□□□ -0.14
ATRX-222ENST00000636868 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
ATRX-222ENST00000636868 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
ATRX-222ENST00000636868 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
ATRX-222ENST00000636868 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATRX-222ENST00000636868 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
ATRX-222ENST00000636868 EVX2Q03828 476 aa13.98□□□□□ -0.17
ATRX-222ENST00000636868 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
ATRX-222ENST00000636868 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
ATRX-222ENST00000636868 LHX8Q68G74 356 aa13.64□□□□□ -0.23
ATRX-222ENST00000636868 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
ATRX-222ENST00000636868 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
ATRX-222ENST00000636868 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
ATRX-222ENST00000636868 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
ATRX-222ENST00000636868 GABBR2O75899 941 aa13.6□□□□□ -0.23
ATRX-222ENST00000636868 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
ATRX-222ENST00000636868 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
ATRX-222ENST00000636868 SPDYE1Q8NFV5 336 aaPredicted RBP13.54□□□□□ -0.24
ATRX-222ENST00000636868 FBLN2P98095 1184 aa13.48□□□□□ -0.25
ATRX-222ENST00000636868 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
ATRX-222ENST00000636868 ZBTB22O15209 634 aa13.38□□□□□ -0.27
ATRX-222ENST00000636868 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
ATRX-222ENST00000636868 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
ATRX-222ENST00000636868 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
ATRX-222ENST00000636868 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
ATRX-222ENST00000636868 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
ATRX-222ENST00000636868 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
ATRX-222ENST00000636868 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
ATRX-222ENST00000636868 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
ATRX-222ENST00000636868 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATRX-222ENST00000636868 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
ATRX-222ENST00000636868 DCBLD2Q96PD2 775 aa13.09□□□□□ -0.31
ATRX-222ENST00000636868 CLCN6P51797 869 aa13.06□□□□□ -0.32
ATRX-222ENST00000636868 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
ATRX-222ENST00000636868 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
ATRX-222ENST00000636868 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
ATRX-222ENST00000636868 POTEMA6NI47 508 aa12.9□□□□□ -0.34
ATRX-222ENST00000636868 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
ATRX-222ENST00000636868 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
ATRX-222ENST00000636868 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
ATRX-222ENST00000636868 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
ATRX-222ENST00000636868 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
ATRX-222ENST00000636868 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
ATRX-222ENST00000636868 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
ATRX-222ENST00000636868 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
ATRX-222ENST00000636868 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
ATRX-222ENST00000636868 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
ATRX-222ENST00000636868 STAG3Q9UJ98 1225 aa12.59□□□□□ -0.39
ATRX-222ENST00000636868 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
ATRX-222ENST00000636868 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
ATRX-222ENST00000636868 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
ATRX-222ENST00000636868 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms