RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 FAM161BQ96MY7 647 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 FRMD6Q96NE9 622 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 TINF2Q9BSI4 451 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 OSBPL2Q9H1P3 480 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 ACBD3Q9H3P7 528 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 CYLDQ9NQC7 956 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 EVA1BQ9NVM1 165 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 CHIC2Q9UKJ5 165 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 PCDHB11Q9Y5F2 797 aa2.48□□□□□ -2.01
GABRB3-220ENST00000636512 ARHGAP33O14559 1287 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 PPP1R12AO14974 1030 aaPredicted RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 U2SURPO15042 1029 aaKnown RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SNPHO15079 494 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 GIGYF1O75420 1035 aaPredicted RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 DKK1O94907 266 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 NPR3P17342 541 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 USP5P45974 858 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 EIF1AXP47813 144 aaKnown RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 FANCCQ00597 558 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 FMR1Q06787 632 aaKnown RBP eCLIP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 RBL2Q08999 1139 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 RAD51AP2Q09MP3 1159 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 PTPROQ16827 1216 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 TSGA10IPQ3SY00 556 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 TAF7LQ5H9L4 462 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 BLOC1S3Q6QNY0 202 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 HS2ST1Q7LGA3 356 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 USP48Q86UV5 1035 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 METTL16Q86W50 562 aaKnown RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 CERS3Q8IU89 383 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SCUBE3Q8IX30 993 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 CKAP2LQ8IYA6 745 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SEPT12Q8IYM1 358 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 CCDC24Q8N4L8 307 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 MICAL1Q8TDZ2 1067 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SCG3Q8WXD2 468 aaKnown RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 CCDC85AQ96PX6 553 aaPredicted RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 NIF3L1Q9GZT8 377 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SLKQ9H2G2 1235 aaPredicted RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 MYH16Q9H6N6 1097 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 STIM2Q9P246 746 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 CDV3Q9UKY7 258 aaKnown RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 SPG7Q9UQ90 795 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 R3HCC1Q9Y3T6 440 aaKnown RBP2.47□□□□□ -2.01
GABRB3-220ENST00000636512 PCDHB3Q9Y5E6 796 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 PCDHGA11Q9Y5H2 935 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 ATAD2Q6PL18 1390 aa2.47□□□□□ -2.01
GABRB3-220ENST00000636512 PNMA6FA0A0J9YX94 578 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 POTEFA5A3E0 1075 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 RAB11FIP3O75154 756 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 GABBR2O75899 941 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 SSBP05455 408 aaKnown RBP eCLIP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 EIF4BP23588 611 aaKnown RBP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 HSD3B2P26439 372 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 GNA15P30679 374 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 BMS1Q14692 1282 aaKnown RBP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 ECM1Q16610 540 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 MSS51Q4VC12 460 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 HSP90AB2PQ58FF8 381 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 CCDC181Q5TID7 509 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 EGFLAMQ63HQ2 1017 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 PPP1R18Q6NYC8 613 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 ZNF662Q6ZS27 426 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 MRPL50Q8N5N7 158 aaKnown RBP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 FBF1Q8TES7 1133 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 ALKBH8Q96BT7 664 aaKnown RBP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 ZFRQ96KR1 1074 aaKnown RBP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 SPACA7Q96KW9 195 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 GMLQ99445 158 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 SLC4A5Q9BY07 1137 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 UNC93B1Q9H1C4 597 aa2.46□□□□□ -2.02
GABRB3-220ENST00000636512 NOP58Q9Y2X3 529 aaKnown RBP2.46□□□□□ -2.02
GABRB3-220ENST00000636512 ZBTB24O43167 697 aaPredicted RBP2.45□□□□□ -2.02
GABRB3-220ENST00000636512 PPP1R12BO60237 982 aaPredicted RBP2.45□□□□□ -2.02
GABRB3-220ENST00000636512 RPLP1P05386 114 aaKnown RBP2.45□□□□□ -2.02
GABRB3-220ENST00000636512 HOXB3P14651 431 aaPredicted RBP2.45□□□□□ -2.02
GABRB3-220ENST00000636512 TNNI2P48788 182 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 PSEN2P49810 448 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 CHMP4BP1P59074 171 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 RAB15P59190 212 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 DSC3Q14574 896 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 ESCO1Q5FWF5 840 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 GORABQ5T7V8 394 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 CAPN12Q6ZSI9 719 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 SH3BP5LQ7L8J4 393 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 KCNB2Q92953 911 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 CRELD1Q96HD1 420 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 SPSB2Q99619 263 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 PCGF6Q9BYE7 350 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 TRIM55Q9BYV6 548 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 TMX1Q9H3N1 280 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 CCDC87Q9NVE4 849 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 ZNF358Q9NW07 568 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 FAM13BQ9NYF5 915 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 GGT7Q9UJ14 662 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 WWC3Q9ULE0 1092 aa2.45□□□□□ -2.02
GABRB3-220ENST00000636512 AK5Q9Y6K8 562 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms