RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 CHIC1Q5VXU3 224 aa5.26□□□□□ -1.57
GABRB3-220ENST00000636512 AEBP2Q6ZN18 517 aaPredicted RBP5.02□□□□□ -1.61
GABRB3-220ENST00000636512 PHF23Q9BUL5 403 aaPredicted RBP4.61□□□□□ -1.67
GABRB3-220ENST00000636512 PLPPR3Q6T4P5 718 aa4.46□□□□□ -1.7
GABRB3-220ENST00000636512 SENP3Q9H4L4 574 aaPredicted RBP4.32□□□□□ -1.72
GABRB3-220ENST00000636512 EHMT2Q96KQ7 1210 aa4.31□□□□□ -1.72
GABRB3-220ENST00000636512 KCNA4P22459 653 aa4.17□□□□□ -1.74
GABRB3-220ENST00000636512 ADRA2BP18089 450 aa4.08□□□□□ -1.76
GABRB3-220ENST00000636512 SLC4A1APQ9BWU0 796 aaKnown RBP4.08□□□□□ -1.76
GABRB3-220ENST00000636512 CSRNP3Q8WYN3 585 aa4.06□□□□□ -1.76
GABRB3-220ENST00000636512 SLC24A1O60721 1099 aa4.04□□□□□ -1.76
GABRB3-220ENST00000636512 NCBP3Q53F19 620 aaKnown RBP4.01□□□□□ -1.77
GABRB3-220ENST00000636512 PPP6R1Q9UPN7 881 aa3.97□□□□□ -1.77
GABRB3-220ENST00000636512 AMER1Q5JTC6 1135 aaPredicted RBP3.95□□□□□ -1.78
GABRB3-220ENST00000636512 PPP4R3CPQ6ZMV5 832 aa3.94□□□□□ -1.78
GABRB3-220ENST00000636512 FOXD1Q16676 465 aa3.91□□□□□ -1.78
GABRB3-220ENST00000636512 RTN4Q9NQC3 1192 aaKnown RBP3.86□□□□□ -1.79
GABRB3-220ENST00000636512 NPM3O75607 178 aaKnown RBP3.85□□□□□ -1.79
GABRB3-220ENST00000636512 PIAS4Q8N2W9 510 aaPredicted RBP3.83□□□□□ -1.8
GABRB3-220ENST00000636512 SCAF1Q9H7N4 1312 aaKnown RBP3.8□□□□□ -1.8
GABRB3-220ENST00000636512 CNKSR2Q8WXI2 1034 aa3.79□□□□□ -1.8
GABRB3-220ENST00000636512 FOXD4L1Q9NU39 408 aa3.79□□□□□ -1.8
GABRB3-220ENST00000636512 ZBTB22O15209 634 aa3.77□□□□□ -1.81
GABRB3-220ENST00000636512 FKBP8Q14318 412 aa3.71□□□□□ -1.82
GABRB3-220ENST00000636512 DNAJC5BQ9UF47 199 aa3.65□□□□□ -1.83
GABRB3-220ENST00000636512 ATXN8OSP0DMR3 200 aa3.64□□□□□ -1.83
GABRB3-220ENST00000636512 RNF216Q9NWF9 866 aaPredicted RBP3.62□□□□□ -1.83
GABRB3-220ENST00000636512 MYCNP04198 464 aaPredicted RBP3.6□□□□□ -1.83
GABRB3-220ENST00000636512 HAP1P54257 671 aaPredicted RBP3.6□□□□□ -1.83
GABRB3-220ENST00000636512 BCANQ96GW7 911 aa3.6□□□□□ -1.83
GABRB3-220ENST00000636512 PLCB2Q00722 1185 aa3.59□□□□□ -1.83
GABRB3-220ENST00000636512 DCAF8L2P0C7V8 631 aa3.57□□□□□ -1.84
GABRB3-220ENST00000636512 MSH5O43196 834 aa3.56□□□□□ -1.84
GABRB3-220ENST00000636512 MAPK8IP2Q13387 824 aaPredicted RBP3.55□□□□□ -1.84
GABRB3-220ENST00000636512 FBXO3Q9UK99 471 aa3.55□□□□□ -1.84
GABRB3-220ENST00000636512 SLC4A2P04920 1241 aa3.52□□□□□ -1.85
GABRB3-220ENST00000636512 VSIG10Q8N0Z9 540 aa3.52□□□□□ -1.85
GABRB3-220ENST00000636512 TAOK2Q9UL54 1235 aa3.52□□□□□ -1.85
GABRB3-220ENST00000636512 PRKCSHP14314 528 aaPredicted RBP3.5□□□□□ -1.85
GABRB3-220ENST00000636512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.49□□□□□ -1.85
GABRB3-220ENST00000636512 HOXD11P31277 338 aaPredicted RBP3.49□□□□□ -1.85
GABRB3-220ENST00000636512 HNRNPUL2Q1KMD3 747 aaKnown RBP3.49□□□□□ -1.85
GABRB3-220ENST00000636512 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.49□□□□□ -1.85
GABRB3-220ENST00000636512 TPRNQ4KMQ1 711 aa3.48□□□□□ -1.85
GABRB3-220ENST00000636512 SAMD1Q6SPF0 538 aaPredicted RBP3.46□□□□□ -1.86
GABRB3-220ENST00000636512 DMRT2Q9Y5R5 561 aa3.46□□□□□ -1.86
GABRB3-220ENST00000636512 ERICH6Q7L0X2 663 aa3.45□□□□□ -1.86
GABRB3-220ENST00000636512 VASPP50552 380 aaPredicted RBP3.43□□□□□ -1.86
GABRB3-220ENST00000636512 SPDYE4A6NLX3 237 aa3.42□□□□□ -1.86
GABRB3-220ENST00000636512 PAXIP1Q6ZW49 1069 aaPredicted RBP3.42□□□□□ -1.86
GABRB3-220ENST00000636512 BBXQ8WY36 941 aaPredicted RBP3.42□□□□□ -1.86
GABRB3-220ENST00000636512 CFAP44Q96MT7 982 aa3.42□□□□□ -1.86
GABRB3-220ENST00000636512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.42□□□□□ -1.86
GABRB3-220ENST00000636512 APLP2Q06481 763 aa3.41□□□□□ -1.86
GABRB3-220ENST00000636512 DCAF8L1A6NGE4 600 aa3.4□□□□□ -1.87
GABRB3-220ENST00000636512 NBR1Q14596 966 aa3.4□□□□□ -1.87
GABRB3-220ENST00000636512 KLHL34Q8N239 644 aa3.39□□□□□ -1.87
GABRB3-220ENST00000636512 ARXQ96QS3 562 aa3.39□□□□□ -1.87
GABRB3-220ENST00000636512 ATF5Q9Y2D1 282 aaPredicted RBP3.39□□□□□ -1.87
GABRB3-220ENST00000636512 SPRYD3Q8NCJ5 442 aa3.38□□□□□ -1.87
GABRB3-220ENST00000636512 DAXXQ9UER7 740 aaPredicted RBP3.38□□□□□ -1.87
GABRB3-220ENST00000636512 ECM2O94769 699 aaPredicted RBP3.37□□□□□ -1.87
GABRB3-220ENST00000636512 FBLN2P98095 1184 aa3.37□□□□□ -1.87
GABRB3-220ENST00000636512 IFNLR1Q8IU57 520 aaPredicted RBP3.37□□□□□ -1.87
GABRB3-220ENST00000636512 ZNF219Q9P2Y4 722 aaPredicted RBP3.37□□□□□ -1.87
GABRB3-220ENST00000636512 TULP1O00294 542 aaPredicted RBP3.36□□□□□ -1.87
GABRB3-220ENST00000636512 PKD2Q13563 968 aa3.36□□□□□ -1.87
GABRB3-220ENST00000636512 KDM2AQ9Y2K7 1162 aa3.36□□□□□ -1.87
GABRB3-220ENST00000636512 GTF3C3Q9Y5Q9 886 aa3.36□□□□□ -1.87
GABRB3-220ENST00000636512 SPOCK2Q92563 424 aa3.34□□□□□ -1.87
GABRB3-220ENST00000636512 HOMEZQ8IX15 550 aa3.33□□□□□ -1.88
GABRB3-220ENST00000636512 TIMELESSQ9UNS1 1208 aa3.33□□□□□ -1.88
GABRB3-220ENST00000636512 PROM2Q8N271 834 aa3.31□□□□□ -1.88
GABRB3-220ENST00000636512 TSHZ2Q9NRE2 1034 aa3.31□□□□□ -1.88
GABRB3-220ENST00000636512 U3KPZ7 1027 aaPredicted RBP3.31□□□□□ -1.88
GABRB3-220ENST00000636512 C14orf37Q86TY3 774 aa3.3□□□□□ -1.88
GABRB3-220ENST00000636512 PLCD3Q8N3E9 789 aa3.3□□□□□ -1.88
GABRB3-220ENST00000636512 PLEKHG5O94827 1062 aa3.29□□□□□ -1.88
GABRB3-220ENST00000636512 NPM1P06748 294 aaKnown RBP eCLIP3.29□□□□□ -1.88
GABRB3-220ENST00000636512 CHGAP10645 457 aaKnown RBP3.29□□□□□ -1.88
GABRB3-220ENST00000636512 TMEM132AQ24JP5 1023 aa3.29□□□□□ -1.88
GABRB3-220ENST00000636512 STAG3Q9UJ98 1225 aa3.28□□□□□ -1.88
GABRB3-220ENST00000636512 CIZ1Q9ULV3 898 aaPredicted RBP3.28□□□□□ -1.88
GABRB3-220ENST00000636512 RGL2O15211 777 aa3.26□□□□□ -1.89
GABRB3-220ENST00000636512 RANGAP1P46060 587 aaPredicted RBP3.26□□□□□ -1.89
GABRB3-220ENST00000636512 MKRN4PQ13434 485 aaPredicted RBP3.26□□□□□ -1.89
GABRB3-220ENST00000636512 MIER1Q8N108 512 aa3.26□□□□□ -1.89
GABRB3-220ENST00000636512 ZBTB47Q9UFB7 747 aaPredicted RBP3.26□□□□□ -1.89
GABRB3-220ENST00000636512 TRIM41Q8WV44 630 aa3.25□□□□□ -1.89
GABRB3-220ENST00000636512 TRHP20396 242 aaPredicted RBP3.24□□□□□ -1.89
GABRB3-220ENST00000636512 ZBTB12Q9Y330 459 aaPredicted RBP3.24□□□□□ -1.89
GABRB3-220ENST00000636512 POLA2Q14181 598 aa3.22□□□□□ -1.89
GABRB3-220ENST00000636512 ZNF692Q9BU19 519 aaPredicted RBP3.21□□□□□ -1.9
GABRB3-220ENST00000636512 DNAJC5Q9H3Z4 198 aa3.21□□□□□ -1.9
GABRB3-220ENST00000636512 CAPN15O75808 1086 aa3.2□□□□□ -1.9
GABRB3-220ENST00000636512 P3H3Q8IVL6 736 aa3.2□□□□□ -1.9
GABRB3-220ENST00000636512 HS6ST3Q8IZP7 471 aa3.2□□□□□ -1.9
GABRB3-220ENST00000636512 RYDENQ9NUL5 291 aaKnown RBP3.2□□□□□ -1.9
GABRB3-220ENST00000636512 GSE1Q14687 1217 aa3.19□□□□□ -1.9
GABRB3-220ENST00000636512 WDR70Q9NW82 654 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms