RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 CCDC24Q8N4L8 307 aa8.82□□□□□ -1
CAST-243ENST00000515160 NKX2-3Q8TAU0 364 aa8.82□□□□□ -1
CAST-243ENST00000515160 TUT1Q9H6E5 874 aaKnown RBP8.82□□□□□ -1
CAST-243ENST00000515160 SFI1A8K8P3 1242 aa8.81□□□□□ -1
CAST-243ENST00000515160 HINFPQ9BQA5 517 aa8.81□□□□□ -1
CAST-243ENST00000515160 ANO2Q9NQ90 1003 aa8.81□□□□□ -1
CAST-243ENST00000515160 PRR20EP86478 221 aa8.8□□□□□ -1
CAST-243ENST00000515160 PRR20CP86479 221 aa8.8□□□□□ -1
CAST-243ENST00000515160 PRR20DP86480 221 aa8.8□□□□□ -1
CAST-243ENST00000515160 PRR20BP86481 221 aa8.8□□□□□ -1
CAST-243ENST00000515160 PRR20AP86496 221 aa8.8□□□□□ -1
CAST-243ENST00000515160 USP4Q13107 963 aa8.8□□□□□ -1
CAST-243ENST00000515160 STK17AQ9UEE5 414 aa8.8□□□□□ -1
CAST-243ENST00000515160 PCDHGA11Q9Y5H2 935 aa8.8□□□□□ -1
CAST-243ENST00000515160 FAM187AA6NFU0 413 aa8.79□□□□□ -1
CAST-243ENST00000515160 TCF3P15923 654 aa8.79□□□□□ -1
CAST-243ENST00000515160 MAPK1P28482 360 aa8.79□□□□□ -1
CAST-243ENST00000515160 COPS2P61201 443 aa8.79□□□□□ -1
CAST-243ENST00000515160 AGERQ15109 404 aa8.79□□□□□ -1
CAST-243ENST00000515160 PTCRAQ6ISU1 281 aaPredicted RBP8.79□□□□□ -1
CAST-243ENST00000515160 SH3RF1Q7Z6J0 888 aa8.79□□□□□ -1
CAST-243ENST00000515160 BPHLQ86WA6 291 aaPredicted RBP8.79□□□□□ -1
CAST-243ENST00000515160 MAGI1Q96QZ7 1491 aaPredicted RBP8.78□□□□□ -1
CAST-243ENST00000515160 C21orf2O43822 256 aa8.78□□□□□ -1
CAST-243ENST00000515160 ERFEQ4G0M1 354 aa8.78□□□□□ -1
CAST-243ENST00000515160 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
CAST-243ENST00000515160 ZNF598Q86UK7 904 aaKnown RBP8.78□□□□□ -1
CAST-243ENST00000515160 ZSCAN29Q8IWY8 852 aaPredicted RBP8.78□□□□□ -1
CAST-243ENST00000515160 GTF3C2Q8WUA4 911 aaPredicted RBP8.78□□□□□ -1
CAST-243ENST00000515160 SYNJ2O15056 1496 aa8.77□□□□□ -1
CAST-243ENST00000515160 WDR97A6NE52 1622 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 ADH1BP00325 375 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
CAST-243ENST00000515160 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 SLC10A4Q96EP9 437 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 BCL11AQ9H165 835 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 DCTN4Q9UJW0 460 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
CAST-243ENST00000515160 ZPR1O75312 459 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 VAMP1P23763 118 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 SF3B2Q13435 895 aaKnown RBP8.76□□□□□ -1.01
CAST-243ENST00000515160 NBPF20Q3BBV1 942 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 SPRYD7Q5W111 196 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 ASB16Q96NS5 453 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 MKNK1Q9BUB5 465 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 SOGA1O94964 1423 aa8.76□□□□□ -1.01
CAST-243ENST00000515160 M0R2N6 131 aa8.75□□□□□ -1.01
CAST-243ENST00000515160 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
CAST-243ENST00000515160 LGR5O75473 907 aa8.75□□□□□ -1.01
CAST-243ENST00000515160 INSM1Q01101 510 aaPredicted RBP8.75□□□□□ -1.01
CAST-243ENST00000515160 CHMP7Q8WUX9 453 aaPredicted RBP8.75□□□□□ -1.01
CAST-243ENST00000515160 BAP1Q92560 729 aa8.75□□□□□ -1.01
CAST-243ENST00000515160 DNMT3AQ9Y6K1 912 aaPredicted RBP8.75□□□□□ -1.01
CAST-243ENST00000515160 WEE1P30291 646 aa8.74□□□□□ -1.01
CAST-243ENST00000515160 FBXO33Q7Z6M2 555 aa8.74□□□□□ -1.01
CAST-243ENST00000515160 SEPT12Q8IYM1 358 aa8.74□□□□□ -1.01
CAST-243ENST00000515160 FOXJ1Q92949 421 aa8.74□□□□□ -1.01
CAST-243ENST00000515160 GRIN2BQ13224 1484 aa8.74□□□□□ -1.01
CAST-243ENST00000515160 FGD5Q6ZNL6 1462 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 ESPNB1AK53 854 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 RNF223E7ERA6 249 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 TLL1O43897 1013 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 WFS1O76024 890 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 COL19A1Q14993 1142 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 ECM1Q16610 540 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 ZNF511Q8NB15 262 aa8.73□□□□□ -1.01
CAST-243ENST00000515160 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
CAST-243ENST00000515160 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
CAST-243ENST00000515160 MYCP01106 439 aaPredicted RBP8.72□□□□□ -1.01
CAST-243ENST00000515160 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
CAST-243ENST00000515160 FKBP5Q13451 457 aaPredicted RBP8.72□□□□□ -1.01
CAST-243ENST00000515160 ZNF697Q5TEC3 545 aa8.72□□□□□ -1.01
CAST-243ENST00000515160 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
CAST-243ENST00000515160 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
CAST-243ENST00000515160 MTMR3Q13615 1198 aa8.71□□□□□ -1.02
CAST-243ENST00000515160 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.02
CAST-243ENST00000515160 ANKLE1Q8NAG6 615 aa8.71□□□□□ -1.02
CAST-243ENST00000515160 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
CAST-243ENST00000515160 SHROOM2Q13796 1616 aa8.71□□□□□ -1.02
CAST-243ENST00000515160 PBRM1Q86U86 1689 aa8.71□□□□□ -1.02
CAST-243ENST00000515160 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
CAST-243ENST00000515160 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
CAST-243ENST00000515160 RGL4Q8IZJ4 473 aa8.7□□□□□ -1.02
CAST-243ENST00000515160 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
CAST-243ENST00000515160 C8orf37Q96NL8 207 aa8.7□□□□□ -1.02
CAST-243ENST00000515160 C1QTNF2Q9BXJ5 285 aa8.7□□□□□ -1.02
CAST-243ENST00000515160 AAASQ9NRG9 546 aa8.7□□□□□ -1.02
CAST-243ENST00000515160 CAPN12Q6ZSI9 719 aa8.69□□□□□ -1.02
CAST-243ENST00000515160 TRMT44Q8IYL2 757 aaKnown RBP8.69□□□□□ -1.02
CAST-243ENST00000515160 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
CAST-243ENST00000515160 CUX1P39880 1505 aa8.69□□□□□ -1.02
CAST-243ENST00000515160 FOXO3O43524 673 aa8.68□□□□□ -1.02
CAST-243ENST00000515160 FAM13AO94988 1023 aa8.68□□□□□ -1.02
CAST-243ENST00000515160 IGFBP4P22692 258 aa8.68□□□□□ -1.02
CAST-243ENST00000515160 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
CAST-243ENST00000515160 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
CAST-243ENST00000515160 PURBQ96QR8 312 aaKnown RBP8.68□□□□□ -1.02
CAST-243ENST00000515160 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms