RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
CAST-243ENST00000515160 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
CAST-243ENST00000515160 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
CAST-243ENST00000515160 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
CAST-243ENST00000515160 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
CAST-243ENST00000515160 FOXD1Q16676 465 aa19.36■□□□□ 0.69
CAST-243ENST00000515160 MSH5O43196 834 aa18.38■□□□□ 0.53
CAST-243ENST00000515160 PIAS4Q8N2W9 510 aaPredicted RBP17.88■□□□□ 0.45
CAST-243ENST00000515160 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
CAST-243ENST00000515160 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
CAST-243ENST00000515160 ADRA2BP18089 450 aa17.38■□□□□ 0.37
CAST-243ENST00000515160 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
CAST-243ENST00000515160 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
CAST-243ENST00000515160 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
CAST-243ENST00000515160 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
CAST-243ENST00000515160 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
CAST-243ENST00000515160 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
CAST-243ENST00000515160 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
CAST-243ENST00000515160 KCNA4P22459 653 aa15.34■□□□□ 0.05
CAST-243ENST00000515160 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
CAST-243ENST00000515160 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
CAST-243ENST00000515160 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
CAST-243ENST00000515160 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
CAST-243ENST00000515160 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
CAST-243ENST00000515160 POTEHQ6S545 545 aa15.13■□□□□ 0.01
CAST-243ENST00000515160 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
CAST-243ENST00000515160 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
CAST-243ENST00000515160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.05
CAST-243ENST00000515160 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
CAST-243ENST00000515160 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
CAST-243ENST00000515160 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
CAST-243ENST00000515160 DSG3P32926 999 aa14.36□□□□□ -0.11
CAST-243ENST00000515160 CAPN15O75808 1086 aa14.33□□□□□ -0.12
CAST-243ENST00000515160 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
CAST-243ENST00000515160 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
CAST-243ENST00000515160 ZBTB22O15209 634 aa14.11□□□□□ -0.15
CAST-243ENST00000515160 APLP2Q06481 763 aa14.06□□□□□ -0.16
CAST-243ENST00000515160 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
CAST-243ENST00000515160 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
CAST-243ENST00000515160 ABCB7O75027 752 aa13.91□□□□□ -0.18
CAST-243ENST00000515160 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
CAST-243ENST00000515160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
CAST-243ENST00000515160 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
CAST-243ENST00000515160 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
CAST-243ENST00000515160 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
CAST-243ENST00000515160 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
CAST-243ENST00000515160 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
CAST-243ENST00000515160 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
CAST-243ENST00000515160 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
CAST-243ENST00000515160 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
CAST-243ENST00000515160 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
CAST-243ENST00000515160 POLA2Q14181 598 aa13.41□□□□□ -0.26
CAST-243ENST00000515160 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
CAST-243ENST00000515160 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
CAST-243ENST00000515160 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
CAST-243ENST00000515160 HAX1O00165 279 aa13.3□□□□□ -0.28
CAST-243ENST00000515160 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CAST-243ENST00000515160 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
CAST-243ENST00000515160 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
CAST-243ENST00000515160 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
CAST-243ENST00000515160 EVX2Q03828 476 aa13.1□□□□□ -0.31
CAST-243ENST00000515160 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAST-243ENST00000515160 PITPNM1O00562 1244 aa13□□□□□ -0.33
CAST-243ENST00000515160 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
CAST-243ENST00000515160 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
CAST-243ENST00000515160 LHX8Q68G74 356 aa12.89□□□□□ -0.35
CAST-243ENST00000515160 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
CAST-243ENST00000515160 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
CAST-243ENST00000515160 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
CAST-243ENST00000515160 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
CAST-243ENST00000515160 GABBR2O75899 941 aa12.7□□□□□ -0.38
CAST-243ENST00000515160 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
CAST-243ENST00000515160 FBLN2P98095 1184 aa12.65□□□□□ -0.38
CAST-243ENST00000515160 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
CAST-243ENST00000515160 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
CAST-243ENST00000515160 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
CAST-243ENST00000515160 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
CAST-243ENST00000515160 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
CAST-243ENST00000515160 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
CAST-243ENST00000515160 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
CAST-243ENST00000515160 POTEIP0CG38 1075 aa12.45□□□□□ -0.42
CAST-243ENST00000515160 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
CAST-243ENST00000515160 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CAST-243ENST00000515160 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
CAST-243ENST00000515160 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
CAST-243ENST00000515160 PROM2Q8N271 834 aa12.36□□□□□ -0.43
CAST-243ENST00000515160 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
CAST-243ENST00000515160 CLCN6P51797 869 aa12.33□□□□□ -0.44
CAST-243ENST00000515160 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
CAST-243ENST00000515160 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
CAST-243ENST00000515160 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
CAST-243ENST00000515160 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
CAST-243ENST00000515160 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAST-243ENST00000515160 POTEMA6NI47 508 aa12.21□□□□□ -0.45
CAST-243ENST00000515160 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
CAST-243ENST00000515160 BCANQ96GW7 911 aa12.18□□□□□ -0.46
CAST-243ENST00000515160 PKD2Q13563 968 aa12.17□□□□□ -0.46
CAST-243ENST00000515160 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
CAST-243ENST00000515160 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
CAST-243ENST00000515160 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms