RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TSEN34Q9BSV6 310 aaKnown RBP4.38□□□□□ -1.71
SNRNP48-202ENST00000496946 PGPEP1Q9NXJ5 209 aa4.38□□□□□ -1.71
SNRNP48-202ENST00000496946 SOS2Q07890 1332 aaPredicted RBP4.38□□□□□ -1.71
SNRNP48-202ENST00000496946 UPP2O95045 317 aa4.38□□□□□ -1.71
SNRNP48-202ENST00000496946 CCDC82Q8N4S0 544 aa4.38□□□□□ -1.71
SNRNP48-202ENST00000496946 TPCN2Q8NHX9 752 aa4.38□□□□□ -1.71
SNRNP48-202ENST00000496946 TMEM229AB2RXF0 380 aa4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 NFX1Q12986 1120 aaKnown RBP4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 MAFBQ9Y5Q3 323 aaPredicted RBP4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 CDC14CA4D256 554 aa4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 DHX9Q08211 1270 aaKnown RBP4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 SCARF1Q14162 830 aa4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 WASHC4Q2M389 1173 aa4.37□□□□□ -1.71
SNRNP48-202ENST00000496946 SFI1A8K8P3 1242 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 CFAP70Q5T0N1 1121 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 TNS4Q8IZW8 715 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 OGFOD1Q8N543 542 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 PPP1R12CQ9BZL4 782 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 PRM3Q9NNZ6 103 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 MKRN1Q9UHC7 482 aaKnown RBP4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 PCDHGA11Q9Y5H2 935 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 GTF2IP78347 998 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 SLC27A3Q5K4L6 730 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 CAPN12Q6ZSI9 719 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 SEPT12Q8IYM1 358 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 ZMYND15Q9H091 742 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 HCN2Q9UL51 889 aa4.36□□□□□ -1.71
SNRNP48-202ENST00000496946 SOCS7O14512 581 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 PTGIRP43119 386 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 RNFT1Q5M7Z0 435 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 XP32Q5T750 250 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 GAS2L1Q99501 681 aaPredicted RBP4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 THBS1P07996 1170 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 GDF10P55107 478 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 TICAM2Q86XR7 235 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 GPR161Q8N6U8 529 aaKnown RBP4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 STK32AQ8WU08 396 aa4.35□□□□□ -1.71
SNRNP48-202ENST00000496946 RASA1P20936 1047 aa4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 CLN3Q13286 438 aa4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 GRIN2CQ14957 1233 aa4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 RIPOR1Q6ZS17 1223 aa4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 KCTD17Q8N5Z5 321 aa4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 AIDAQ96BJ3 306 aa4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 TSPAN10Q9H1Z9 355 aaPredicted RBP4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 CDV3Q9UKY7 258 aaKnown RBP4.34□□□□□ -1.71
SNRNP48-202ENST00000496946 IRX6P78412 446 aaPredicted RBP4.34□□□□□ -1.72
SNRNP48-202ENST00000496946 CENPCQ03188 943 aa4.34□□□□□ -1.72
SNRNP48-202ENST00000496946 TLR1Q15399 786 aa4.34□□□□□ -1.72
SNRNP48-202ENST00000496946 CHMP7Q8WUX9 453 aaPredicted RBP4.34□□□□□ -1.72
SNRNP48-202ENST00000496946 A6NJR5 290 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 ATP9BO43861 1147 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 DEKP35659 375 aaKnown RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 USP4Q13107 963 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 ESF1Q9H501 851 aaKnown RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 NXF1Q9UBU9 619 aaKnown RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 CHIC2Q9UKJ5 165 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 ZBTB7BO15156 539 aaPredicted RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 MYCP01106 439 aaPredicted RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 KRT76Q01546 638 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 KANK4Q5T7N3 995 aaPredicted RBP4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 CCDC102BQ68D86 513 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 CCDC155Q8N6L0 562 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 ZNF428Q96B54 188 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 ESYT1Q9BSJ8 1104 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 RUBCNLQ9H714 662 aa4.33□□□□□ -1.72
SNRNP48-202ENST00000496946 PLA2G4AP47712 749 aa4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 C4orf17Q53FE4 359 aa4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 TERTO14746 1132 aaKnown RBP4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 CLSTN1O94985 981 aa4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 INHAP05111 366 aa4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 RBM25P49756 843 aaKnown RBP4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 RNF20Q5VTR2 975 aa4.32□□□□□ -1.72
SNRNP48-202ENST00000496946 PPFIA3O75145 1194 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 GMPRP36959 345 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 DPYDQ12882 1025 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 EML3Q32P44 896 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 LYSMD3Q7Z3D4 306 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 NLRP3Q96P20 1036 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 ZNF358Q9NW07 568 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 DKK1O94907 266 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 NCLP19338 710 aaKnown RBP4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 TXLNAP40222 546 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 CYP2U1Q7Z449 544 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 VWA5B2Q8N398 1253 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 MKNK1Q9BUB5 465 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 FHDC1Q9C0D6 1143 aaPredicted RBP4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 SENP2Q9HC62 589 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 ZMIZ1Q9ULJ6 1067 aa4.31□□□□□ -1.72
SNRNP48-202ENST00000496946 C21orf2O43822 256 aa4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 WFS1O76024 890 aa4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 DBN1Q16643 649 aa4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 ZNF295-AS1Q8N0V1 137 aa4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 GTPBP3Q969Y2 492 aaKnown RBP4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 ZSCAN10Q96SZ4 725 aaPredicted RBP4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 IQSEC3Q9UPP2 1182 aaPredicted RBP4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 HRH3Q9Y5N1 445 aa4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 PTK7Q13308 1070 aa4.3□□□□□ -1.72
SNRNP48-202ENST00000496946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 523.9 ms