RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 HELBQ8NG08 1087 aaPredicted RBP6.59□□□□□ -1.35
CALD1-218ENST00000478075 TMPRSS4Q9NRS4 437 aa6.59□□□□□ -1.35
CALD1-218ENST00000478075 WASLO00401 505 aaPredicted RBP6.58□□□□□ -1.36
CALD1-218ENST00000478075 ZC3H4Q9UPT8 1303 aaKnown RBP6.57□□□□□ -1.36
CALD1-218ENST00000478075 A0A1B0GTH6 734 aa6.57□□□□□ -1.36
CALD1-218ENST00000478075 C9orf172C9J069 976 aa6.57□□□□□ -1.36
CALD1-218ENST00000478075 TAL1P17542 331 aaPredicted RBP6.57□□□□□ -1.36
CALD1-218ENST00000478075 TSC1Q92574 1164 aa6.57□□□□□ -1.36
CALD1-218ENST00000478075 C2CD2LO14523 706 aa6.56□□□□□ -1.36
CALD1-218ENST00000478075 SEPT12Q8IYM1 358 aa6.56□□□□□ -1.36
CALD1-218ENST00000478075 GRIP2Q9C0E4 1043 aa6.56□□□□□ -1.36
CALD1-218ENST00000478075 ERVH48-1M5A8F1 160 aa6.55□□□□□ -1.36
CALD1-218ENST00000478075 TRIM28Q13263 835 aaKnown RBP6.55□□□□□ -1.36
CALD1-218ENST00000478075 SLC51AQ86UW1 340 aa6.55□□□□□ -1.36
CALD1-218ENST00000478075 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
CALD1-218ENST00000478075 CCDC102AQ96A19 550 aa6.55□□□□□ -1.36
CALD1-218ENST00000478075 GPSM3Q9Y4H4 160 aa6.55□□□□□ -1.36
CALD1-218ENST00000478075 PTK2Q05397 1052 aa6.54□□□□□ -1.36
CALD1-218ENST00000478075 FIGNL1Q6PIW4 674 aa6.54□□□□□ -1.36
CALD1-218ENST00000478075 A0A1W2PRU2 124 aa6.53□□□□□ -1.36
CALD1-218ENST00000478075 NRG1Q02297 640 aaPredicted RBP6.53□□□□□ -1.36
CALD1-218ENST00000478075 GPAMQ9HCL2 828 aa6.53□□□□□ -1.36
CALD1-218ENST00000478075 CTBSQ01459 385 aa6.52□□□□□ -1.37
CALD1-218ENST00000478075 PPP2R2DQ66LE6 453 aa6.52□□□□□ -1.37
CALD1-218ENST00000478075 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
CALD1-218ENST00000478075 ABHD17AQ96GS6 310 aa6.52□□□□□ -1.37
CALD1-218ENST00000478075 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
CALD1-218ENST00000478075 THBS1P07996 1170 aa6.51□□□□□ -1.37
CALD1-218ENST00000478075 ALAS2P22557 587 aa6.51□□□□□ -1.37
CALD1-218ENST00000478075 RAB15P59190 212 aa6.51□□□□□ -1.37
CALD1-218ENST00000478075 CLN3Q13286 438 aa6.51□□□□□ -1.37
CALD1-218ENST00000478075 UBAP2LQ14157 1087 aaKnown RBP6.51□□□□□ -1.37
CALD1-218ENST00000478075 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
CALD1-218ENST00000478075 NDFIP2Q9NV92 336 aa6.51□□□□□ -1.37
CALD1-218ENST00000478075 TBC1D2Q9BYX2 928 aa6.5□□□□□ -1.37
CALD1-218ENST00000478075 CYLDQ9NQC7 956 aa6.5□□□□□ -1.37
CALD1-218ENST00000478075 FKBPLQ9UIM3 349 aa6.5□□□□□ -1.37
CALD1-218ENST00000478075 GTF2E1P29083 439 aaPredicted RBP6.49□□□□□ -1.37
CALD1-218ENST00000478075 ADGRE1Q14246 886 aa6.49□□□□□ -1.37
CALD1-218ENST00000478075 FAM182BQ5T319 152 aa6.49□□□□□ -1.37
CALD1-218ENST00000478075 TP53INP1Q96A56 240 aa6.49□□□□□ -1.37
CALD1-218ENST00000478075 NUTM2BA6NNL0 878 aaPredicted RBP6.48□□□□□ -1.37
CALD1-218ENST00000478075 NUTM2EB1AL46 878 aaPredicted RBP6.48□□□□□ -1.37
CALD1-218ENST00000478075 BNIP3LO60238 219 aa6.48□□□□□ -1.37
CALD1-218ENST00000478075 NUTM2DQ5VT03 806 aaPredicted RBP6.48□□□□□ -1.37
CALD1-218ENST00000478075 NUTM2AQ8IVF1 878 aaPredicted RBP6.48□□□□□ -1.37
CALD1-218ENST00000478075 ESPNB1AK53 854 aa6.47□□□□□ -1.37
CALD1-218ENST00000478075 MBTPS1Q14703 1052 aa6.47□□□□□ -1.37
CALD1-218ENST00000478075 CYP2U1Q7Z449 544 aa6.47□□□□□ -1.37
CALD1-218ENST00000478075 ADAM32Q8TC27 787 aa6.47□□□□□ -1.37
CALD1-218ENST00000478075 BEGAINQ9BUH8 593 aa6.47□□□□□ -1.37
CALD1-218ENST00000478075 PRDM6Q9NQX0 595 aa6.47□□□□□ -1.37
CALD1-218ENST00000478075 FCHSD1Q86WN1 690 aa6.46□□□□□ -1.38
CALD1-218ENST00000478075 DZIP3Q86Y13 1208 aaKnown RBP6.46□□□□□ -1.38
CALD1-218ENST00000478075 PNMA1Q8ND90 353 aa6.45□□□□□ -1.38
CALD1-218ENST00000478075 CABLES1Q8TDN4 633 aa6.45□□□□□ -1.38
CALD1-218ENST00000478075 PCDHGC4Q9Y5F7 938 aa6.45□□□□□ -1.38
CALD1-218ENST00000478075 ELOA3CA0A087WX78 387 aaPredicted RBP6.44□□□□□ -1.38
CALD1-218ENST00000478075 ELOA3DA6NLF2 546 aaPredicted RBP6.44□□□□□ -1.38
CALD1-218ENST00000478075 TULP1O00294 542 aaPredicted RBP6.44□□□□□ -1.38
CALD1-218ENST00000478075 TUSC1Q2TAM9 212 aa6.44□□□□□ -1.38
CALD1-218ENST00000478075 ELOA3BQ3SY89 546 aa6.44□□□□□ -1.38
CALD1-218ENST00000478075 GNASQ5JWF2 1037 aa6.44□□□□□ -1.38
CALD1-218ENST00000478075 ELOA3Q8NG57 546 aa6.44□□□□□ -1.38
CALD1-218ENST00000478075 CRISPLD1Q9H336 500 aa6.44□□□□□ -1.38
CALD1-218ENST00000478075 TTLL12Q14166 644 aaPredicted RBP6.43□□□□□ -1.38
CALD1-218ENST00000478075 LENG1Q96BZ8 264 aaPredicted RBP6.43□□□□□ -1.38
CALD1-218ENST00000478075 RUBCNLQ9H714 662 aa6.43□□□□□ -1.38
CALD1-218ENST00000478075 GP2P55259 537 aaKnown RBP6.42□□□□□ -1.38
CALD1-218ENST00000478075 GRIK4Q16099 956 aa6.42□□□□□ -1.38
CALD1-218ENST00000478075 ZNF468Q5VIY5 522 aaPredicted RBP6.42□□□□□ -1.38
CALD1-218ENST00000478075 PRR12Q9ULL5 1215 aa6.42□□□□□ -1.38
CALD1-218ENST00000478075 CD97P48960 835 aa6.41□□□□□ -1.38
CALD1-218ENST00000478075 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
CALD1-218ENST00000478075 NLRP8Q86W28 1048 aa6.41□□□□□ -1.38
CALD1-218ENST00000478075 CCER1Q8TC90 406 aaPredicted RBP6.41□□□□□ -1.38
CALD1-218ENST00000478075 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
CALD1-218ENST00000478075 FAM229AH3BQW9 127 aa6.4□□□□□ -1.38
CALD1-218ENST00000478075 MSX1P28360 303 aa6.4□□□□□ -1.38
CALD1-218ENST00000478075 ESF1Q9H501 851 aaKnown RBP6.4□□□□□ -1.38
CALD1-218ENST00000478075 KLF15Q9UIH9 416 aa6.4□□□□□ -1.38
CALD1-218ENST00000478075 ATP1B4Q9UN42 357 aaPredicted RBP6.4□□□□□ -1.38
CALD1-218ENST00000478075 ERVK-9P63128 1117 aa6.39□□□□□ -1.39
CALD1-218ENST00000478075 CSPP1Q1MSJ5 1256 aa6.39□□□□□ -1.39
CALD1-218ENST00000478075 SSTR4P31391 388 aa6.38□□□□□ -1.39
CALD1-218ENST00000478075 ZSCAN10Q96SZ4 725 aaPredicted RBP6.38□□□□□ -1.39
CALD1-218ENST00000478075 M0R082 166 aa6.37□□□□□ -1.39
CALD1-218ENST00000478075 LILRB3O75022 631 aa6.37□□□□□ -1.39
CALD1-218ENST00000478075 PHKA2P46019 1235 aa6.37□□□□□ -1.39
CALD1-218ENST00000478075 RAC1P63000 192 aa6.37□□□□□ -1.39
CALD1-218ENST00000478075 C1orf216Q8TAB5 229 aa6.37□□□□□ -1.39
CALD1-218ENST00000478075 ZNF417Q8TAU3 575 aa6.37□□□□□ -1.39
CALD1-218ENST00000478075 ZNF587Q96SQ5 575 aaPredicted RBP6.37□□□□□ -1.39
CALD1-218ENST00000478075 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
CALD1-218ENST00000478075 ZCCHC2Q9C0B9 1178 aaKnown RBP6.37□□□□□ -1.39
CALD1-218ENST00000478075 ATXN7O15265 892 aaPredicted RBP6.36□□□□□ -1.39
CALD1-218ENST00000478075 SELPP16109 830 aa6.36□□□□□ -1.39
CALD1-218ENST00000478075 PCBP4P57723 403 aaKnown RBP6.36□□□□□ -1.39
CALD1-218ENST00000478075 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
CALD1-218ENST00000478075 TMEM214Q6NUQ4 689 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms