RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 LRP8Q14114 963 aa5.61□□□□□ -1.51
PCNPP3-201ENST00000393579 OCSTAMPQ9BR26 566 aa5.61□□□□□ -1.51
PCNPP3-201ENST00000393579 RUBCNLQ9H714 662 aa5.61□□□□□ -1.51
PCNPP3-201ENST00000393579 ATXN7L1Q9ULK2 861 aaPredicted RBP5.61□□□□□ -1.51
PCNPP3-201ENST00000393579 ZC3H4Q9UPT8 1303 aaKnown RBP5.61□□□□□ -1.51
PCNPP3-201ENST00000393579 C2CD2LO14523 706 aa5.6□□□□□ -1.51
PCNPP3-201ENST00000393579 APBA3O96018 575 aa5.6□□□□□ -1.51
PCNPP3-201ENST00000393579 THBS1P07996 1170 aa5.6□□□□□ -1.51
PCNPP3-201ENST00000393579 PARP9Q8IXQ6 854 aa5.6□□□□□ -1.51
PCNPP3-201ENST00000393579 GRIP2Q9C0E4 1043 aa5.6□□□□□ -1.51
PCNPP3-201ENST00000393579 SPATA31C2B4DYI2 1134 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 CTBSQ01459 385 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 PRRT3Q5FWE3 981 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 WDR44Q5JSH3 913 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 EFHC2Q5JST6 749 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 ESF1Q9H501 851 aaKnown RBP5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 GPSM3Q9Y4H4 160 aa5.59□□□□□ -1.51
PCNPP3-201ENST00000393579 A0A1B0GTH6 734 aa5.58□□□□□ -1.52
PCNPP3-201ENST00000393579 YBX3P16989 372 aaKnown RBP eCLIP5.58□□□□□ -1.52
PCNPP3-201ENST00000393579 TRIM11Q96F44 468 aa5.58□□□□□ -1.52
PCNPP3-201ENST00000393579 ARHGEF10LQ9HCE6 1279 aa5.58□□□□□ -1.52
PCNPP3-201ENST00000393579 SPDYE3A6NKU9 549 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 ESPNB1AK53 854 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 PAX4O43316 350 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 HYAL3O43820 417 aaPredicted RBP5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 ARAFP10398 606 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 GTF2E1P29083 439 aaPredicted RBP5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 CLN3Q13286 438 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 TUSC1Q2TAM9 212 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 MCTP1Q6DN14 999 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 CYP2U1Q7Z449 544 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 SEPT12Q8IYM1 358 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 PNMA1Q8ND90 353 aa5.57□□□□□ -1.52
PCNPP3-201ENST00000393579 TXKP42681 527 aa5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 CLK2P49760 499 aaKnown RBP5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 PPP2R2DQ66LE6 453 aa5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 CC2D2BQ6DHV5 1058 aa5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 RAB6BQ9NRW1 208 aa5.56□□□□□ -1.52
PCNPP3-201ENST00000393579 BNIP3LO60238 219 aa5.55□□□□□ -1.52
PCNPP3-201ENST00000393579 ADH6P28332 368 aa5.55□□□□□ -1.52
PCNPP3-201ENST00000393579 GNASQ5JWF2 1037 aa5.55□□□□□ -1.52
PCNPP3-201ENST00000393579 ATP1B4Q9UN42 357 aaPredicted RBP5.55□□□□□ -1.52
PCNPP3-201ENST00000393579 FAM229AH3BQW9 127 aa5.54□□□□□ -1.52
PCNPP3-201ENST00000393579 TMEM214Q6NUQ4 689 aaKnown RBP5.54□□□□□ -1.52
PCNPP3-201ENST00000393579 POLR3EQ9NVU0 708 aa5.54□□□□□ -1.52
PCNPP3-201ENST00000393579 GIGYF1O75420 1035 aaPredicted RBP5.53□□□□□ -1.52
PCNPP3-201ENST00000393579 MSX1P28360 303 aa5.53□□□□□ -1.52
PCNPP3-201ENST00000393579 UBAP2LQ14157 1087 aaKnown RBP5.53□□□□□ -1.52
PCNPP3-201ENST00000393579 ZSCAN10Q96SZ4 725 aaPredicted RBP5.53□□□□□ -1.52
PCNPP3-201ENST00000393579 PCDHB9Q9Y5E1 797 aa5.53□□□□□ -1.52
PCNPP3-201ENST00000393579 ERVK-9P63128 1117 aa5.52□□□□□ -1.53
PCNPP3-201ENST00000393579 BARGINQ6ZT62 677 aa5.52□□□□□ -1.53
PCNPP3-201ENST00000393579 NACC1Q96RE7 527 aa5.52□□□□□ -1.53
PCNPP3-201ENST00000393579 FCHSD1Q86WN1 690 aa5.51□□□□□ -1.53
PCNPP3-201ENST00000393579 CNKSR1Q969H4 720 aa5.51□□□□□ -1.53
PCNPP3-201ENST00000393579 DCDC2BA2VCK2 349 aa5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 SCTRP47872 440 aa5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 PCBP4P57723 403 aaKnown RBP5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 CENPCQ03188 943 aa5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 FIGNL1Q6PIW4 674 aa5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 EPS8L1Q8TE68 723 aa5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 PRR12Q9ULL5 1215 aa5.5□□□□□ -1.53
PCNPP3-201ENST00000393579 AP1G2O75843 785 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 ELNP15502 786 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 CD33P20138 364 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 TRIM28Q13263 835 aaKnown RBP5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 GRIK4Q16099 956 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 C4orf17Q53FE4 359 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 NDFIP2Q9NV92 336 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 PCDHB11Q9Y5F2 797 aa5.49□□□□□ -1.53
PCNPP3-201ENST00000393579 ZMYND10O75800 440 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 H2AFB1P0C5Y9 115 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 H2AFB2P0C5Z0 115 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 ALAS2P22557 587 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 RNF20Q5VTR2 975 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 ESYT1Q9BSJ8 1104 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 KLF15Q9UIH9 416 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 PCDHGC4Q9Y5F7 938 aa5.48□□□□□ -1.53
PCNPP3-201ENST00000393579 TRIM66O15016 1216 aa5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 KHNYNO15037 678 aaKnown RBP5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 ATXN7O15265 892 aaPredicted RBP5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 IL2RAP01589 272 aa5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 TP53INP1Q96A56 240 aa5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 ZCCHC2Q9C0B9 1178 aaKnown RBP5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 RSPH6AQ9H0K4 717 aa5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 OSBPL3Q9H4L5 887 aa5.47□□□□□ -1.53
PCNPP3-201ENST00000393579 PLA2G4AP47712 749 aa5.46□□□□□ -1.54
PCNPP3-201ENST00000393579 FZD5Q13467 585 aa5.46□□□□□ -1.54
PCNPP3-201ENST00000393579 TBC1D9Q6ZT07 1266 aa5.46□□□□□ -1.54
PCNPP3-201ENST00000393579 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.46□□□□□ -1.54
PCNPP3-201ENST00000393579 GNRH1P01148 92 aa5.45□□□□□ -1.54
PCNPP3-201ENST00000393579 CCDC125Q86Z20 511 aa5.45□□□□□ -1.54
PCNPP3-201ENST00000393579 CRISPLD1Q9H336 500 aa5.45□□□□□ -1.54
PCNPP3-201ENST00000393579 HMX1Q9NP08 348 aaPredicted RBP5.45□□□□□ -1.54
PCNPP3-201ENST00000393579 AVENQ9NQS1 362 aaPredicted RBP5.45□□□□□ -1.54
PCNPP3-201ENST00000393579 PCMTD2Q9NV79 361 aa5.45□□□□□ -1.54
PCNPP3-201ENST00000393579 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms