RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
FXR1-202ENST00000357559 TRMT1Q9NXH9 659 aaKnown RBP12.28□□□□□ -0.44
FXR1-202ENST00000357559 TDRD12Q587J7 1177 aaKnown RBP12.28□□□□□ -0.44
FXR1-202ENST00000357559 TSG101Q99816 390 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
FXR1-202ENST00000357559 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
FXR1-202ENST00000357559 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 DNAI2Q9GZS0 605 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.44
FXR1-202ENST00000357559 PRKCSHP14314 528 aaPredicted RBP12.27□□□□□ -0.44
FXR1-202ENST00000357559 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.44
FXR1-202ENST00000357559 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
FXR1-202ENST00000357559 GCOM1H8Y6P7 765 aaPredicted RBP12.27□□□□□ -0.45
FXR1-202ENST00000357559 K7ELQ4 463 aaPredicted RBP12.27□□□□□ -0.45
FXR1-202ENST00000357559 MYZAPP0CAP1 466 aa12.27□□□□□ -0.45
FXR1-202ENST00000357559 MCM2P49736 904 aa12.27□□□□□ -0.45
FXR1-202ENST00000357559 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.45
FXR1-202ENST00000357559 OTUD6BQ8N6M0 293 aa12.27□□□□□ -0.45
FXR1-202ENST00000357559 DHX57Q6P158 1386 aaKnown RBP12.27□□□□□ -0.45
FXR1-202ENST00000357559 FERP16591 822 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 UBXN4Q92575 508 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 FKBP15Q5T1M5 1219 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 SMTNL1A8MU46 457 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
FXR1-202ENST00000357559 SAMM50Q9Y512 469 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 CCDC160A6NGH7 325 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 URI1O94763 535 aaPredicted RBP12.26□□□□□ -0.45
FXR1-202ENST00000357559 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
FXR1-202ENST00000357559 RGS22Q8NE09 1264 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
FXR1-202ENST00000357559 PPFIA3O75145 1194 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 SSX2IPQ9Y2D8 614 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
FXR1-202ENST00000357559 PPP1R14CQ8TAE6 165 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 TIGD1Q96MW7 591 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 KIF5CO60282 957 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
FXR1-202ENST00000357559 KIF4BQ2VIQ3 1234 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 CCDC83Q8IWF9 413 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 CEP131Q9UPN4 1083 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 DPH6Q7L8W6 267 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 IMMTQ16891 758 aaKnown RBP12.25□□□□□ -0.45
FXR1-202ENST00000357559 SPATA24Q86W54 205 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
FXR1-202ENST00000357559 NOP2P46087 812 aaKnown RBP12.24□□□□□ -0.45
FXR1-202ENST00000357559 TCERG1LQ5VWI1 586 aa12.24□□□□□ -0.45
FXR1-202ENST00000357559 TXNDC2Q86VQ3 553 aa12.24□□□□□ -0.45
FXR1-202ENST00000357559 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
FXR1-202ENST00000357559 MAATS1Q7Z4T9 603 aa12.24□□□□□ -0.45
FXR1-202ENST00000357559 DZIP1Q86YF9 867 aaKnown RBP12.24□□□□□ -0.45
FXR1-202ENST00000357559 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
FXR1-202ENST00000357559 PSMC4P43686 418 aa12.24□□□□□ -0.45
FXR1-202ENST00000357559 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
FXR1-202ENST00000357559 PRC1O43663 620 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 SYCP3Q8IZU3 236 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 CUL5Q93034 780 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 TSNARE1Q96NA8 513 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
FXR1-202ENST00000357559 MXRA7P84157 204 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 BICD1Q96G01 975 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 ANKRD18BA2A2Z9 1011 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 ZPR1O75312 459 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 MAP3K11Q16584 847 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
FXR1-202ENST00000357559 PTPN14Q15678 1187 aa12.23□□□□□ -0.45
FXR1-202ENST00000357559 CCDC175P0C221 793 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 PTCD1O75127 700 aaKnown RBP12.22□□□□□ -0.45
FXR1-202ENST00000357559 KIF20AO95235 890 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 CTR9Q6PD62 1173 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 A0A1W2PRG0 241 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 BIN1O00499 593 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 VPS36Q86VN1 386 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 SPG7Q9UQ90 795 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 CCT2P78371 535 aaKnown RBP12.22□□□□□ -0.45
FXR1-202ENST00000357559 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 SYNCQ9H7C4 482 aa12.22□□□□□ -0.45
FXR1-202ENST00000357559 MYO1BO43795 1136 aa12.21□□□□□ -0.45
FXR1-202ENST00000357559 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
FXR1-202ENST00000357559 CFAP58Q5T655 872 aa12.21□□□□□ -0.45
FXR1-202ENST00000357559 WASF1Q92558 559 aa12.21□□□□□ -0.45
FXR1-202ENST00000357559 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.45
FXR1-202ENST00000357559 RAB3IL1Q8TBN0 382 aa12.21□□□□□ -0.45
FXR1-202ENST00000357559 GJC1P36383 396 aa12.21□□□□□ -0.45
FXR1-202ENST00000357559 JPH4Q96JJ6 628 aa12.21□□□□□ -0.46
FXR1-202ENST00000357559 PANK2Q9BZ23 570 aa12.21□□□□□ -0.46
FXR1-202ENST00000357559 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.46
FXR1-202ENST00000357559 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms