RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 Rims2Q9EQZ7 1530 aa16.49■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Ccdc155Q80VJ8 648 aa16.49■□□□□ 0.23
Ube3a-216ENSMUST00000202945 CalcaP70160 136 aa16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Cers3Q1A3B0 383 aa16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Arhgef1Q61210 920 aaKnown RBP16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Mcm4P49717 862 aa16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Atf3Q60765 181 aa16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Dixdc1Q80Y83 711 aa16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Foxp4Q9DBY0 795 aaKnown RBP16.48■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Srgap3Q812A2 1099 aa16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Rnf214Q8BFU3 668 aaKnown RBP16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Gm21698A0A087WQP8 267 aa16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Gm21671G3UY31 267 aa16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Chmp4cQ9D7F7 232 aa16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Ush1cQ9ES64 910 aa16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Bcl9Q9D219 1425 aa16.47■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Btbd11Q6GQW0 1109 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Ano8Q6PB70 1060 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Exoc6bA6H5Z3 810 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Map3k13Q1HKZ5 959 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Plcd3Q8K2J0 785 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Gnai2P08752 355 aaKnown RBP16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Cwc27Q3TKY6 469 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 4933402E13RikQ9D4D2 429 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Scn7aB1AYL1 1681 aa16.46■□□□□ 0.23
Ube3a-216ENSMUST00000202945 Cgnl1Q6AW69 1298 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Aldh1l2Q8K009 923 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 PtprvP70289 1705 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Tm6sf1P58749 370 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Ncoa4Q5U4H9 625 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Zranb3Q6NZP1 1069 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Ppp1r42Q8R1Z4 357 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Amotl1Q9D4H4 968 aa16.45■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Kif2cQ922S8 721 aa16.44■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Becn1O88597 448 aa16.44■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Nkx2-3P97334 362 aa16.44■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Fam50bQ9WTJ8 334 aa16.44■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Q9D2X8 372 aa16.44■□□□□ 0.22
Ube3a-216ENSMUST00000202945 BccipQ9CWI3 316 aa16.43■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Cyp46a1Q9WVK8 500 aa16.43■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Ahnak2E9PYB0 1738 aaKnown RBP16.43■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Slc4a10Q5DTL9 1118 aa16.43■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Bcar3Q9QZK2 820 aa16.43■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Atg4a-psA0A0G2JFS9 396 aa16.42■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Catsper2A2ARP9 588 aa16.42■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Atg4aQ8C9S8 396 aa16.42■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Disp3A3KFU9 1347 aa16.42■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Gcc1Q9D4H2 778 aa16.42■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Nphp1Q9QY53 687 aa16.42■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Cfdp1O88271 295 aaKnown RBP16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Zap70P43404 618 aa16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Mphosph10Q810V0 681 aaKnown RBP16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Zhx1P70121 873 aa16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Atf5O70191 283 aa16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Tpm2P58774 284 aa16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Fam43aQ8BUP8 424 aa16.41■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Hmox1P14901 289 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Eif4a1P60843 406 aaKnown RBP16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Aldh8a1Q8BH00 487 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Slit2Q9R1B9 1521 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Igsf1Q7TQA1 1317 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Cyp2d11P24457 504 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Pcmtd1P59913 357 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Nol11Q8BJW5 723 aaKnown RBP16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Ppp1r37Q8BKR5 712 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 OptnQ8K3K8 584 aa16.4■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Ptpn23Q6PB44 1692 aa16.39■□□□□ 0.22
Ube3a-216ENSMUST00000202945 Msh6P54276 1358 aaKnown RBP16.39■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Kdm6aO70546 1401 aa16.39■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Kiaa0754Q69ZZ9 979 aa16.39■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Arfgef2A2A5R2 1792 aa16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Adgrb1Q3UHD1 1582 aa16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Rad17Q6NXW6 688 aa16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Rimbp3Q3V0F0 1606 aa16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Hsp90b1P08113 802 aaKnown RBP16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Kif20aP97329 887 aa16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Chmp7Q8R1T1 451 aa16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Nsfl1cQ9CZ44 370 aaKnown RBP16.38■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Terf2O35144 541 aa16.37■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Kcna6Q61923 529 aa16.37■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Rsph3aQ3UFY4 516 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 TkfcQ8VC30 578 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Acsbg1Q99PU5 721 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 TnrQ8BYI9 1358 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Nfat5Q9WV30 1534 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Cbx1P83917 185 aaKnown RBP16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Phf23Q8BSN5 401 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Prune1Q8BIW1 454 aa16.36■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Pdia3P27773 505 aaKnown RBP16.35■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Tlr7P58681 1050 aa16.35■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Thsd7aQ69ZU6 1645 aa16.35■□□□□ 0.21
Ube3a-216ENSMUST00000202945 CrklP47941 303 aa16.35■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Mcm2P97310 904 aa16.35■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Rapgef3Q8VCC8 918 aa16.35■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Ppip5k2Q6ZQB6 1129 aa16.34■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Tet3Q8BG87 1668 aa16.34■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Irf5P56477 497 aa16.34■□□□□ 0.21
Ube3a-216ENSMUST00000202945 CenppQ9CZ92 286 aa16.34■□□□□ 0.21
Ube3a-216ENSMUST00000202945 Dmrtc1Q9D9R7 182 aa16.34■□□□□ 0.21
Ube3a-216ENSMUST00000202945 GckrQ91X44 587 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms