RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Adgrb1Q3UHD1 1582 aa13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 Nlgn1Q99K10 843 aa13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 Mknk2Q8CDB0 459 aa13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 Nckap5lQ6GQX2 1323 aa13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 MpripP97434 1024 aa13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 Gse1Q3U3C9 1213 aa13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 Rbm10Q99KG3 930 aaKnown RBP13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 C3P01027 1663 aa13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 Als2Q920R0 1651 aa13.8□□□□□ -0.2
Lig1-211ENSMUST00000177588 Syce3B5KM66 88 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Vwa3bJ9JI28 736 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Eif4a2P10630 407 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Stk31Q99MW1 1018 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Fyb1O35601 819 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Rapgef3Q8VCC8 918 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Myo5bP21271 1818 aa13.79□□□□□ -0.2
Lig1-211ENSMUST00000177588 Nrxn3Q6P9K9 1571 aa13.78□□□□□ -0.2
Lig1-211ENSMUST00000177588 1700019A02RikA0A087WPV9 146 aa13.78□□□□□ -0.2
Lig1-211ENSMUST00000177588 Becn1O88597 448 aa13.78□□□□□ -0.2
Lig1-211ENSMUST00000177588 Gadd45bP22339 160 aa13.78□□□□□ -0.2
Lig1-211ENSMUST00000177588 NexnQ7TPW1 607 aa13.78□□□□□ -0.2
Lig1-211ENSMUST00000177588 Ubr1O70481 1757 aa13.78□□□□□ -0.2
Lig1-211ENSMUST00000177588 Pank2Q3U4S0 443 aa13.77□□□□□ -0.2
Lig1-211ENSMUST00000177588 Bcar3Q9QZK2 820 aa13.77□□□□□ -0.2
Lig1-211ENSMUST00000177588 CemipQ8BI06 1361 aa13.77□□□□□ -0.2
Lig1-211ENSMUST00000177588 Col14a1Q80X19 1797 aa13.77□□□□□ -0.2
Lig1-211ENSMUST00000177588 Gm45015A0A140LII9 184 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Gm18336A0A140LIU8 765 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Zscan25B2RX31 543 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Kdm4aQ8BW72 1064 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Pnma3Q8JZW8 466 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Rcan3Q9JKK0 239 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Slit2Q9R1B9 1521 aa13.77□□□□□ -0.21
Lig1-211ENSMUST00000177588 Tmem2Q5FWI3 1383 aa13.76□□□□□ -0.21
Lig1-211ENSMUST00000177588 Zfp777B9EKF4 885 aa13.76□□□□□ -0.21
Lig1-211ENSMUST00000177588 Thsd7aQ69ZU6 1645 aa13.76□□□□□ -0.21
Lig1-211ENSMUST00000177588 Rbm27Q5SFM8 1060 aaKnown RBP13.76□□□□□ -0.21
Lig1-211ENSMUST00000177588 Gripap1Q8VD04 806 aa13.76□□□□□ -0.21
Lig1-211ENSMUST00000177588 Ptpn23Q6PB44 1692 aa13.76□□□□□ -0.21
Lig1-211ENSMUST00000177588 CalcaP70160 136 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 E4f1Q8CCE9 783 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 Glipr1l2Q9CQ35 332 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 Gzf1Q4VBD9 706 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 Prune1Q8BIW1 454 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 RestQ8VIG1 1082 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 LlphQ9D945 130 aaKnown RBP13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 Zkscan2G3X952 960 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 Kif4P33174 1231 aa13.75□□□□□ -0.21
Lig1-211ENSMUST00000177588 FancaQ9JL70 1439 aa13.74□□□□□ -0.21
Lig1-211ENSMUST00000177588 GnpatP98192 678 aa13.74□□□□□ -0.21
Lig1-211ENSMUST00000177588 Pibf1E9Q6K3 756 aa13.74□□□□□ -0.21
Lig1-211ENSMUST00000177588 Irf5P56477 497 aa13.74□□□□□ -0.21
Lig1-211ENSMUST00000177588 Atf3Q60765 181 aa13.74□□□□□ -0.21
Lig1-211ENSMUST00000177588 Nol8Q3UHX0 1147 aaKnown RBP13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Rnf214Q8BFU3 668 aaKnown RBP13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Pik3c2aQ61194 1686 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Phlpp1Q8CHE4 1687 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Trpm3Q5F4S9 1721 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Mum1Q6DID5 682 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 AnlnQ8K298 1121 aaKnown RBP13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Sipa1l2Q80TE4 1722 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Ccne1Q61457 408 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Tmem132eQ6IEE6 982 aa13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Nol11Q8BJW5 723 aaKnown RBP13.73□□□□□ -0.21
Lig1-211ENSMUST00000177588 Rtf1A2AQ19 715 aaKnown RBP13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Wdr17E9Q271 1322 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Farp2Q91VS8 1065 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 TimelessQ9R1X4 1197 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Col16a1Q8BLX7 1580 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Nom1Q3UFM5 854 aaKnown RBP13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Ggnbp2Q5SV77 696 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Filip1lQ6P6L0 1131 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Cc2d1aQ8K1A6 943 aa13.72□□□□□ -0.21
Lig1-211ENSMUST00000177588 Mindy4Q3UQI9 744 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 TmpoQ61033 693 aaKnown RBP13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Ptpdc1Q6NZK8 747 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Sv2bQ8BG39 683 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Gimap6Q8K349 305 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Map2P20357 1828 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Phactr2B1AVP0 632 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 St18Q80TY4 1045 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Nphp1Q9QY53 687 aa13.71□□□□□ -0.21
Lig1-211ENSMUST00000177588 Gnai2P08752 355 aaKnown RBP13.71□□□□□ -0.22
Lig1-211ENSMUST00000177588 Atp6v1dP57746 247 aa13.71□□□□□ -0.22
Lig1-211ENSMUST00000177588 Anapc15P60007 132 aa13.71□□□□□ -0.22
Lig1-211ENSMUST00000177588 TatQ8QZR1 454 aa13.71□□□□□ -0.22
Lig1-211ENSMUST00000177588 Chmp4cQ9D7F7 232 aa13.71□□□□□ -0.22
Lig1-211ENSMUST00000177588 Srgap3Q812A2 1099 aa13.7□□□□□ -0.22
Lig1-211ENSMUST00000177588 MccE9PWI3 1003 aa13.7□□□□□ -0.22
Lig1-211ENSMUST00000177588 Hoxc9P09633 260 aa13.7□□□□□ -0.22
Lig1-211ENSMUST00000177588 Hmox1P14901 289 aa13.7□□□□□ -0.22
Lig1-211ENSMUST00000177588 Eya1P97767 591 aa13.7□□□□□ -0.22
Lig1-211ENSMUST00000177588 PtprvP70289 1705 aa13.7□□□□□ -0.22
Lig1-211ENSMUST00000177588 Scn4aQ9ER60 1841 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Prim1P20664 417 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 EvcP57680 1005 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Ddx17Q501J6 650 aaKnown RBP13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Ppp1r42Q8R1Z4 357 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Brwd3A2AHJ4 1799 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Mmp8O70138 465 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms