RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Pard3Q99NH2 1333 aa13.57□□□□□ -0.24
Lig3-212ENSMUST00000173727 Col1a2Q01149 1372 aa13.56□□□□□ -0.24
Lig3-212ENSMUST00000173727 Qtrt2B8ZXI1 415 aa13.56□□□□□ -0.24
Lig3-212ENSMUST00000173727 Arhgef1Q61210 920 aaKnown RBP13.56□□□□□ -0.24
Lig3-212ENSMUST00000173727 Lrrc59Q922Q8 307 aaKnown RBP13.56□□□□□ -0.24
Lig3-212ENSMUST00000173727 Asic4Q7TNS7 539 aa13.55□□□□□ -0.24
Lig3-212ENSMUST00000173727 Znf526Q8BI66 675 aa13.55□□□□□ -0.24
Lig3-212ENSMUST00000173727 Gm21680A0A0G2JGR8 267 aa13.55□□□□□ -0.24
Lig3-212ENSMUST00000173727 Fgd1P52734 960 aa13.55□□□□□ -0.24
Lig3-212ENSMUST00000173727 Sart3Q9JLI8 962 aaKnown RBP13.55□□□□□ -0.24
Lig3-212ENSMUST00000173727 Fkbp4P30416 458 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Zeb2Q9R0G7 1215 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Gm21663A0A0G2JE01 267 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Gm7361D3Z6R1 267 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 5031410I06RikE9Q4E0 267 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Gm1979E9QAN3 267 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Gm5862K7N5V5 267 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Gm10220K7N660 267 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Ssfa2Q922B9 1252 aa13.54□□□□□ -0.24
Lig3-212ENSMUST00000173727 Cnksr1A2A9K7 700 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 ArxO35085 564 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Slc5a1Q8C3K6 665 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Atl3Q91YH5 541 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Hspa1lP16627 641 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 PsapQ61207 557 aaKnown RBP13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Aldh1l2Q8K009 923 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Hs1bp3Q3TC93 395 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Larp1Q6ZQ58 1072 aaKnown RBP13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 Bcl2l12Q9D3J3 255 aa13.53□□□□□ -0.24
Lig3-212ENSMUST00000173727 GckrQ91X44 587 aa13.52□□□□□ -0.25
Lig3-212ENSMUST00000173727 AU019823E9PUQ3 292 aa13.52□□□□□ -0.25
Lig3-212ENSMUST00000173727 Bcl2l13P59017 434 aa13.52□□□□□ -0.25
Lig3-212ENSMUST00000173727 Pnpla7A2AJ88 1352 aa13.51□□□□□ -0.25
Lig3-212ENSMUST00000173727 CoilQ5SU73 570 aa13.51□□□□□ -0.25
Lig3-212ENSMUST00000173727 Disp3A3KFU9 1347 aa13.5□□□□□ -0.25
Lig3-212ENSMUST00000173727 Taf7Q9R1C0 341 aa13.5□□□□□ -0.25
Lig3-212ENSMUST00000173727 Tmem119Q8R138 280 aa13.5□□□□□ -0.25
Lig3-212ENSMUST00000173727 Ubr2Q6WKZ8 1755 aa13.5□□□□□ -0.25
Lig3-212ENSMUST00000173727 Akap11E9Q777 1895 aa13.5□□□□□ -0.25
Lig3-212ENSMUST00000173727 Triml2E9PW10 424 aa13.49□□□□□ -0.25
Lig3-212ENSMUST00000173727 HnrnpuQ8VEK3 800 aaKnown RBP13.49□□□□□ -0.25
Lig3-212ENSMUST00000173727 TefQ9JLC6 301 aa13.49□□□□□ -0.25
Lig3-212ENSMUST00000173727 Slc5a4bQ91ZP4 660 aa13.49□□□□□ -0.25
Lig3-212ENSMUST00000173727 Ggt6Q6PDE7 497 aa13.49□□□□□ -0.25
Lig3-212ENSMUST00000173727 BcorQ8CGN4 1759 aa13.48□□□□□ -0.25
Lig3-212ENSMUST00000173727 Phf23Q8BSN5 401 aa13.48□□□□□ -0.25
Lig3-212ENSMUST00000173727 Echdc1Q9D9V3 322 aa13.48□□□□□ -0.25
Lig3-212ENSMUST00000173727 Prkar2bP31324 416 aa13.48□□□□□ -0.25
Lig3-212ENSMUST00000173727 Cnnm1Q0GA42 951 aa13.47□□□□□ -0.25
Lig3-212ENSMUST00000173727 Iqsec3Q3TES0 1195 aa13.47□□□□□ -0.25
Lig3-212ENSMUST00000173727 SkilQ60665 675 aa13.47□□□□□ -0.25
Lig3-212ENSMUST00000173727 Elp1Q7TT37 1333 aaKnown RBP13.47□□□□□ -0.25
Lig3-212ENSMUST00000173727 Cyp2d11P24457 504 aa13.47□□□□□ -0.25
Lig3-212ENSMUST00000173727 SympkQ80X82 1284 aa13.47□□□□□ -0.25
Lig3-212ENSMUST00000173727 Efcab2Q9CQ46 164 aa13.46□□□□□ -0.25
Lig3-212ENSMUST00000173727 Tm6sf1P58749 370 aa13.46□□□□□ -0.26
Lig3-212ENSMUST00000173727 Wwc1Q5SXA9 1104 aa13.46□□□□□ -0.26
Lig3-212ENSMUST00000173727 Nkx1-2P42580 305 aa13.45□□□□□ -0.26
Lig3-212ENSMUST00000173727 Trim27Q62158 513 aa13.45□□□□□ -0.26
Lig3-212ENSMUST00000173727 Ppp2r3aB2RXC8 1150 aa13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Pdia6Q922R8 440 aaKnown RBP13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Kcnh4A2A5F7 1018 aa13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Gnai2P08752 355 aaKnown RBP13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Dnai1Q8C0M8 701 aa13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 PigbQ9JJQ0 542 aa13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Ints5Q8CHT3 1018 aa13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Ipo4Q8VI75 1082 aa13.44□□□□□ -0.26
Lig3-212ENSMUST00000173727 Exoc6bA6H5Z3 810 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Trim30dE9PWL0 497 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 4930567H17RikQ3V0K5 233 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Prkab2Q6PAM0 271 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 AceP09470 1312 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Irf9Q61179 399 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Morc2aQ69ZX6 1030 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Pknox2Q8BG99 474 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Fam13aQ8BGI4 693 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Flad1Q8R123 492 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 ApobrQ8VBT6 942 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Ginm1Q91WR6 327 aa13.43□□□□□ -0.26
Lig3-212ENSMUST00000173727 Map7O88735 730 aa13.42□□□□□ -0.26
Lig3-212ENSMUST00000173727 Sik1Q60670 779 aa13.42□□□□□ -0.26
Lig3-212ENSMUST00000173727 Ccnl1Q52KE7 532 aaKnown RBP13.42□□□□□ -0.26
Lig3-212ENSMUST00000173727 Mphosph10Q810V0 681 aaKnown RBP13.42□□□□□ -0.26
Lig3-212ENSMUST00000173727 Flt4P35917 1363 aa13.42□□□□□ -0.26
Lig3-212ENSMUST00000173727 Map3k2Q61083 619 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Eif4g2Q62448 906 aaKnown RBP13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 CarsQ9ER72 831 aaKnown RBP13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Adcy9P51830 1353 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Stk36Q69ZM6 1316 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Kat6bQ8BRB7 1872 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Pm20d1Q8C165 503 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Atg3Q9CPX6 314 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Psrc1Q9D0P7 329 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Ccdc129Q14B48 1034 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Exoc5Q3TPX4 708 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Cetn4Q8K4K1 168 aa13.41□□□□□ -0.26
Lig3-212ENSMUST00000173727 Cfdp1O88271 295 aaKnown RBP13.4□□□□□ -0.26
Lig3-212ENSMUST00000173727 LifrP42703 1092 aa13.4□□□□□ -0.26
Lig3-212ENSMUST00000173727 Zap70P43404 618 aa13.4□□□□□ -0.26
Lig3-212ENSMUST00000173727 Bend3Q6PAL0 825 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms