RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 5031410I06RikE9Q4E0 267 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gm1979E9QAN3 267 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gm5862K7N5V5 267 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gm10220K7N660 267 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Ddx54Q8K4L0 874 aaKnown RBP12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 GckrQ91X44 587 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gm21680A0A0G2JGR8 267 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 RgmbQ7TQ33 436 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Disp3A3KFU9 1347 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Rabep1O35551 862 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Tm6sf1P58749 370 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Smim5Q8BT42 78 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Nphp1Q9QY53 687 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Col15a1O35206 1367 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 4930572O03RikQ8C5Y0 211 aa12.16□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Cyp46a1Q9WVK8 500 aa12.15□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Brinp3Q499E0 766 aa12.15□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Bcl11bQ99PV8 884 aa12.15□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Phkg2Q9DB30 406 aa12.15□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Tbc1d32Q3URV1 1296 aa12.15□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gcc1Q9D4H2 778 aa12.15□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Aox2Q5SGK3 1345 aa12.15□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Tbc1d9Q3UYK3 1264 aa12.14□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Cyp2d11P24457 504 aa12.14□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Map3k2Q61083 619 aa12.14□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Ppp1r9bQ6R891 817 aaKnown RBP12.14□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Q9D2X8 372 aa12.14□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Mdc1Q5PSV9 1707 aa12.14□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Echdc1Q9D9V3 322 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Cnksr1A2A9K7 700 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 CalcaP70160 136 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 CoilQ5SU73 570 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Slc5a1Q8C3K6 665 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Tfip11Q9ERA6 838 aaKnown RBP12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 TefQ9JLC6 301 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Bcar3Q9QZK2 820 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Larp1Q6ZQ58 1072 aaKnown RBP12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Asic4Q7TNS7 539 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Slc39a6Q8C145 765 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Thsd7aQ69ZU6 1645 aa12.13□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Nfat5Q9WV30 1534 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Atg4a-psA0A0G2JFS9 396 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Plekhd1B2RPU2 505 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Sptbn5F6UCX4 1208 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Prkab2Q6PAM0 271 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Aldh8a1Q8BH00 487 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Atg4aQ8C9S8 396 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Hmox1P14901 289 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Stk11ipQ3TAA7 1072 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 SympkQ80X82 1284 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Eif3bQ8JZQ9 803 aaKnown RBP12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Hsp90b1P08113 802 aaKnown RBP12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 PigbQ9JJQ0 542 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Col1a2Q01149 1372 aa12.12□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Msh6P54276 1358 aaKnown RBP12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Mre11Q61216 706 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Kcna4Q61423 654 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Q8BT18 775 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Slit2Q9R1B9 1521 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Taf7Q9R1C0 341 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Simc1E9Q6E9 1354 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Mcm2P97310 904 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Atp8b2P98199 1209 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 4933416C03RikQ3V063 378 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Cadps2Q8BYR5 1297 aa12.11□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Nid2O88322 1403 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Rfx1P48377 963 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Irf9Q61179 399 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Tmc1Q8R4P5 757 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Tlr7P58681 1050 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Abcc12Q80WJ6 1366 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Gimap5Q8BWF2 308 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 ZgpatQ8VDM1 511 aa12.1□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Rtn4Q99P72 1162 aaKnown RBP12.09□□□□□ -0.47
Rnf41-202ENSMUST00000171342 PtprvP70289 1705 aa12.09□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Scn7aB1AYL1 1681 aa12.09□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Hspa2P17156 633 aa12.09□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Tceal9Q9DD24 104 aa12.09□□□□□ -0.47
Rnf41-202ENSMUST00000171342 Jarid2Q62315 1234 aa12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Bend3Q6PAL0 825 aa12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Phf23Q8BSN5 401 aa12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Efcab2Q9CQ46 164 aa12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ahnak2E9PYB0 1738 aaKnown RBP12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Mmp8O70138 465 aa12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ptpdc1Q6NZK8 747 aa12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Bicc1Q99MQ1 977 aaKnown RBP12.08□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ptpn23Q6PB44 1692 aa12.07□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ggt6Q6PDE7 497 aa12.07□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ttll7A4Q9F0 912 aa12.07□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ier5O89113 308 aa12.07□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Nup153E9Q3G8 1462 aaKnown RBP12.07□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Hsp90aa1P07901 733 aaKnown RBP12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Pa2g4P50580 394 aaKnown RBP12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Arid3aQ62431 601 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Lmbr1lQ9D1E5 489 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Scn4aQ9ER60 1841 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Pnpla7A2AJ88 1352 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Zkscan2G3X952 960 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Stk36Q69ZM6 1316 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Pdia3P27773 505 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms