RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Cep63Q3UPP8 700 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Cfap100Q80VN0 613 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ccdc30Q8BVF4 654 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Gbp6A0A0G2JDV3 611 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 Gm43302L7N1X8 611 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 Cux1P53564 1515 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 Mcm5P49718 733 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 PnisrA2AJT4 805 aaKnown RBP21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ccdc158Q8CDI6 1109 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 E9QMW4 1145 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 ClgnP52194 611 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 Dact3Q0PHV7 610 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 EsrrbQ61539 433 aa21.18■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ccdc170D3YXL0 722 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Stmn2P55821 179 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Gnai2P08752 355 aaKnown RBP21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Opa1P58281 960 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Nbr1P97432 988 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Vps36Q91XD6 386 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Letm1Q9Z2I0 738 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Caprin2Q05A80 1031 aaKnown RBP21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Babam1Q3UI43 333 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Klhl10Q9D5V2 608 aa21.17■□□□□ 0.98
Trim71-201ENSMUST00000111816 Rasal2E9PW37 1286 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Morc4Q8BMD7 928 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Uso1Q9Z1Z0 959 aaKnown RBP21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 FerP70451 823 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 IqceQ6PCQ0 778 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Znf692Q3U381 531 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Fsd2Q8BZ52 692 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Swt1Q9DBQ9 907 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Cplx4Q80WM3 160 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Enox2Q8R0Z2 598 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Tacc3Q9JJ11 631 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Map3k9Q3U1V8 1077 aa21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ddx10Q80Y44 875 aaKnown RBP21.16■□□□□ 0.98
Trim71-201ENSMUST00000111816 Specc1Q5SXY1 1067 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Six6os1Q9CTN5 574 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Gm28510A0A087WP28 240 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Tubb5P99024 444 aaKnown RBP21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Lrsam1Q80ZI6 727 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Fam184bQ0KK56 942 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 AknaQ80VW7 1404 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ca8P28651 291 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Sh3d21Q7TSG5 549 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Gramd4Q8CB44 633 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Golim4Q8BXA1 655 aa21.15■□□□□ 0.98
Trim71-201ENSMUST00000111816 Psmc4P54775 418 aa21.14■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ccdc148Q6P5U8 527 aa21.14■□□□□ 0.97
Trim71-201ENSMUST00000111816 Lman1Q9D0F3 517 aa21.14■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ddx49Q4FZF3 480 aaKnown RBP21.13■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ccdc70Q9D9B0 223 aa21.13■□□□□ 0.97
Trim71-201ENSMUST00000111816 Cux2P70298 1426 aa21.13■□□□□ 0.97
Trim71-201ENSMUST00000111816 Samm50Q8BGH2 469 aa21.13■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ppfia2Q8BSS9 1257 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Scaf1Q5U4C3 1256 aaKnown RBP21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Arhgap24Q8C4V1 747 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Tex13c2A0A0G2JGA3 530 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 SfpqQ8VIJ6 699 aaKnown RBP21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Sf3b2Q3UJB0 878 aaKnown RBP21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Gas8Q60779 478 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Vps37dQ810I0 261 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Mcm6P97311 821 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Pank1Q8K4K6 548 aa21.12■□□□□ 0.97
Trim71-201ENSMUST00000111816 Kiaa1524Q8BWY9 907 aa21.11■□□□□ 0.97
Trim71-201ENSMUST00000111816 Pip4k2bQ80XI4 416 aa21.11■□□□□ 0.97
Trim71-201ENSMUST00000111816 Mxra7Q9CZH7 178 aa21.11■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ddx58Q6Q899 926 aa21.11■□□□□ 0.97
Trim71-201ENSMUST00000111816 MycbpQ9EQS3 103 aa21.11■□□□□ 0.97
Trim71-201ENSMUST00000111816 Dpf1Q9QX66 387 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Stx1aO35526 288 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Clip2Q9Z0H8 1047 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Apbb1ipQ8R5A3 670 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Inpp5dQ9ES52 1191 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Hdhd2Q3UGR5 259 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ebag9Q9D0V7 213 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Zc4h2Q68FG0 224 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Cep128Q8BI22 1102 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Jakmip1Q8BVL9 626 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Riok1Q922Q2 567 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Cep83Q9D5R3 692 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Rpap1Q80TE0 1409 aa21.1■□□□□ 0.97
Trim71-201ENSMUST00000111816 Capn2O08529 700 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ccdc14Q8K2J4 934 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Agbl1Q09M05 972 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Spats2Q8K1N4 545 aaKnown RBP21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Cib2Q9Z309 187 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ranbp1P34022 203 aaKnown RBP21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Txndc16Q7TN22 820 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Stard3nlQ9DCI3 235 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Dapk1Q80YE7 1442 aa21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Pus7B7ZNL8 666 aaKnown RBP21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Rbm5Q91YE7 815 aaKnown RBP21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 Ccdc124Q9D8X2 217 aaKnown RBP21.09■□□□□ 0.97
Trim71-201ENSMUST00000111816 FanciQ8K368 1330 aa21.08■□□□□ 0.97
Trim71-201ENSMUST00000111816 NacadQ5SWP3 1504 aa21.08■□□□□ 0.97
Trim71-201ENSMUST00000111816 Taf7lQ9D3R9 471 aa21.08■□□□□ 0.97
Trim71-201ENSMUST00000111816 TefQ9JLC6 301 aa21.08■□□□□ 0.97
Trim71-201ENSMUST00000111816 Tex19.1Q99MV2 351 aa21.08■□□□□ 0.96
Trim71-201ENSMUST00000111816 Luc7l3Q5SUF2 432 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms