RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Zmym3Q9JLM4 1370 aa12.78□□□□□ -0.36
Clip1-204ENSMUST00000111564 Ccdc173A0JLY1 547 aa12.77□□□□□ -0.36
Clip1-204ENSMUST00000111564 Cwc27Q3TKY6 469 aa12.77□□□□□ -0.36
Clip1-204ENSMUST00000111564 Prpf4bQ61136 1007 aaKnown RBP12.77□□□□□ -0.36
Clip1-204ENSMUST00000111564 Mre11Q61216 706 aa12.77□□□□□ -0.36
Clip1-204ENSMUST00000111564 AatkQ80YE4 1365 aa12.77□□□□□ -0.37
Clip1-204ENSMUST00000111564 Erlin2Q8BFZ9 340 aa12.77□□□□□ -0.37
Clip1-204ENSMUST00000111564 Slc13a4Q8BZ82 625 aa12.77□□□□□ -0.37
Clip1-204ENSMUST00000111564 Fsd2Q8BZ52 692 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 Nap1l5Q9JJF0 156 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 AnkarA2RT91 1465 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 Robo2Q7TPD3 1470 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 Myo5cE9Q1F5 1742 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 GnpatP98192 678 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 ImmtQ8CAQ8 757 aaKnown RBP12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 Nup133Q8R0G9 1155 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 Polr3dQ91WD1 398 aa12.76□□□□□ -0.37
Clip1-204ENSMUST00000111564 Dnajc5gQ8C632 165 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 PdcQ9QW08 244 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 AdgbG3UZ78 1657 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Igf2bp2Q5SF07 592 aaKnown RBP12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Frat2Q8K025 231 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Hfm1D3Z4R1 1434 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Dhx8A2A4P0 1244 aaKnown RBP12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 SfswapQ3USH5 945 aaKnown RBP12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Ssr1Q9CY50 286 aaKnown RBP12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Rai14Q9EP71 979 aaKnown RBP12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Tom1O88746 492 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Apaf1O88879 1249 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 EzrP26040 586 aaKnown RBP12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Ggnbp2Q5SV77 696 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Dusp9Q7TNL7 452 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Olr1Q9EQ09 363 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Map3k13Q1HKZ5 959 aa12.75□□□□□ -0.37
Clip1-204ENSMUST00000111564 Pcdh10E9PXQ7 1057 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Plekhg5Q66T02 1073 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 KarsQ99MN1 595 aaKnown RBP12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Tmod2Q9JKK7 351 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Cdc45Q9Z1X9 566 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Mbd5B1AYB6 1498 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Kcnj4P52189 445 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Q3UJC8 639 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Plekhh1Q80TI1 1356 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Ppp2r1aQ76MZ3 589 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Gcc1Q9D4H2 778 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Prex1Q69ZK0 1650 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Rnf216P58283 853 aa12.74□□□□□ -0.37
Clip1-204ENSMUST00000111564 Ccdc172Q810N9 267 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Slc5a1Q8C3K6 665 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Wasf1Q8R5H6 559 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Mrvi1Q9WUX5 899 aaKnown RBP12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Fsd1Q7TPM6 496 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Rab3gap2Q8BMG7 1366 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Spty2d1Q68FG3 682 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 1700010I14RikQ7TPG0 532 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Lmbr1Q9JIT0 490 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Topbp1Q6ZQF0 1515 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Exoc5Q3TPX4 708 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Eif5P59325 429 aaKnown RBP12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Slc7a3P70423 618 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Pde4dQ01063 747 aa12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Nsfl1cQ9CZ44 370 aaKnown RBP12.73□□□□□ -0.37
Clip1-204ENSMUST00000111564 Lrrfip1Q3UZ39 729 aaKnown RBP12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Ipo4Q8VI75 1082 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Armc3A2AU72 881 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Hoxa7P02830 229 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Znf697Q569E7 569 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Larp1Q6ZQ58 1072 aaKnown RBP12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Srgap3Q812A2 1099 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Fchsd2Q3USJ8 740 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Mipol1Q9D9F8 279 aa12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 IbtkQ6ZPR6 1352 aaKnown RBP12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Rrs1Q9CYH6 365 aaKnown RBP12.72□□□□□ -0.37
Clip1-204ENSMUST00000111564 Tulp4Q9JIL5 1547 aa12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 Spg7Q3ULF4 781 aa12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 Slc52a2Q9D8F3 450 aa12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 TmpoQ61033 693 aaKnown RBP12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 Ankrd13dQ6PD24 605 aa12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 Kdm4aQ8BW72 1064 aa12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 Epb41l3Q9WV92 929 aa12.71□□□□□ -0.37
Clip1-204ENSMUST00000111564 Efcab6Q6P1E8 1516 aa12.71□□□□□ -0.38
Clip1-204ENSMUST00000111564 Cul5Q9D5V5 780 aa12.71□□□□□ -0.38
Clip1-204ENSMUST00000111564 Skint5A7XUY5 1461 aa12.71□□□□□ -0.38
Clip1-204ENSMUST00000111564 Gm10563F6WIE4 79 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Abcd1P48410 736 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Adck5Q80V03 582 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Znf18Q810A1 556 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Rsph6aQ8CDR2 708 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Tnni2P13412 182 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 VeztQ3ZK22 780 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Taok2Q6ZQ29 1240 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Tmco3Q8BH01 678 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 PalmQ9Z0P4 383 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Prrc2bQ7TPM1 1486 aaKnown RBP12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Babam1Q3UI43 333 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Mns1Q61884 491 aa12.7□□□□□ -0.38
Clip1-204ENSMUST00000111564 Cetn1P41209 172 aa12.69□□□□□ -0.38
Clip1-204ENSMUST00000111564 Rbm27Q5SFM8 1060 aaKnown RBP12.69□□□□□ -0.38
Clip1-204ENSMUST00000111564 Bcl11aQ9QYE3 773 aa12.69□□□□□ -0.38
Clip1-204ENSMUST00000111564 Noc2lQ9WV70 747 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms