RNA–Protein interactions for RNA: ENSMUST00000110054.7

Use1-203, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Use1, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-203ENSMUST00000110054 Cers3Q1A3B0 383 aa13.3□□□□□ -0.28
Use1-203ENSMUST00000110054 Neurod2Q62414 383 aa13.3□□□□□ -0.28
Use1-203ENSMUST00000110054 TefQ9JLC6 301 aa13.3□□□□□ -0.28
Use1-203ENSMUST00000110054 Col1a2Q01149 1372 aa13.3□□□□□ -0.28
Use1-203ENSMUST00000110054 Lama4P97927 1816 aa13.29□□□□□ -0.28
Use1-203ENSMUST00000110054 Rad21Q61550 635 aaKnown RBP13.29□□□□□ -0.28
Use1-203ENSMUST00000110054 Cdc37l1Q9CZP7 335 aa13.29□□□□□ -0.28
Use1-203ENSMUST00000110054 CoblQ5NBX1 1337 aaKnown RBP13.29□□□□□ -0.28
Use1-203ENSMUST00000110054 Igsf1Q7TQA1 1317 aa13.29□□□□□ -0.28
Use1-203ENSMUST00000110054 U2surpQ6NV83 1029 aaKnown RBP13.28□□□□□ -0.28
Use1-203ENSMUST00000110054 Atxn3Q9CVD2 355 aa13.28□□□□□ -0.28
Use1-203ENSMUST00000110054 Ankrd50F7BE84 1390 aa13.28□□□□□ -0.28
Use1-203ENSMUST00000110054 Smarcc1P97496 1104 aa13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 Flad1Q8R123 492 aa13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 Mylk2Q8VCR8 613 aa13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 Foxp4Q9DBY0 795 aaKnown RBP13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 Ttc21aQ8C0S4 1314 aa13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 Msh6P54276 1358 aaKnown RBP13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 Ddx60E9PZQ1 1711 aa13.27□□□□□ -0.29
Use1-203ENSMUST00000110054 NudcO35685 332 aaKnown RBP13.26□□□□□ -0.29
Use1-203ENSMUST00000110054 Eif4a1P60843 406 aaKnown RBP13.26□□□□□ -0.29
Use1-203ENSMUST00000110054 Ezh2Q61188 746 aaKnown RBP13.26□□□□□ -0.29
Use1-203ENSMUST00000110054 Col11a2Q64739 1736 aa13.26□□□□□ -0.29
Use1-203ENSMUST00000110054 DiexfQ8BTT6 772 aaKnown RBP13.26□□□□□ -0.29
Use1-203ENSMUST00000110054 Irx6Q9ER75 438 aa13.26□□□□□ -0.29
Use1-203ENSMUST00000110054 Sipa1l3G3X9J0 1776 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Zfyve9A2A8R0 1397 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 MetP16056 1379 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Pibf1E9Q6K3 756 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Cnnm1Q0GA42 951 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Iqsec3Q3TES0 1195 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Ccdc30Q8BVF4 654 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Klhdc4Q921I2 584 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Usp16Q99LG0 825 aa13.25□□□□□ -0.29
Use1-203ENSMUST00000110054 Plch1Q4KWH5 1682 aa13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 1700019A02RikA0A087WPV9 146 aa13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 MeiocA2AG06 965 aa13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 Rbm25B2RY56 838 aaKnown RBP13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 NppbP40753 121 aa13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 Q3TQI7 289 aaKnown RBP13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 Ofd1Q80Z25 1017 aa13.24□□□□□ -0.29
Use1-203ENSMUST00000110054 Casz1Q9CWL2 1761 aa13.23□□□□□ -0.29
Use1-203ENSMUST00000110054 Fam198bQ3UPI1 517 aa13.23□□□□□ -0.29
Use1-203ENSMUST00000110054 PsapQ61207 557 aaKnown RBP13.23□□□□□ -0.29
Use1-203ENSMUST00000110054 PigbQ9JJQ0 542 aa13.23□□□□□ -0.29
Use1-203ENSMUST00000110054 Taf7Q9R1C0 341 aa13.23□□□□□ -0.29
Use1-203ENSMUST00000110054 Kif23E9Q5G3 953 aa13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Tnnt1O88346 262 aa13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Zfp444Q3TDV8 331 aaKnown RBP13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Chpf2Q3UU43 768 aa13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Miga2Q8BK03 593 aa13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 GckrQ91X44 587 aa13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Akt1s1Q9D1F4 257 aa13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Senp3Q9EP97 568 aaKnown RBP13.22□□□□□ -0.29
Use1-203ENSMUST00000110054 Gm13023A2A8N2 498 aa13.21□□□□□ -0.29
Use1-203ENSMUST00000110054 Ksr2Q3UVC0 959 aa13.21□□□□□ -0.29
Use1-203ENSMUST00000110054 Lrrc43Q3V0L5 667 aa13.21□□□□□ -0.29
Use1-203ENSMUST00000110054 Nop58Q6DFW4 536 aaKnown RBP13.21□□□□□ -0.29
Use1-203ENSMUST00000110054 Tmem119Q8R138 280 aa13.21□□□□□ -0.29
Use1-203ENSMUST00000110054 Spata31d1bE9QA57 1361 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Erbb4Q61527 1308 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Prr29B1ARI9 187 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Atf5O70191 283 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Jdp2P97875 163 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Gm12185Q5NCB2 835 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Morc2aQ69ZX6 1030 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Plekhh1Q80TI1 1356 aa13.2□□□□□ -0.3
Use1-203ENSMUST00000110054 Syde2E9PUP1 1314 aa13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Ccdc85cE9Q6B2 420 aa13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Fkbp4P30416 458 aa13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 CastP51125 788 aa13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Cyp2d12Q8BVD2 504 aa13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Ccar1Q8CH18 1146 aaKnown RBP13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 RtcbQ99LF4 505 aaKnown RBP13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Pcgf6Q99NA9 353 aa13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Nip7Q9CXK8 180 aaKnown RBP13.19□□□□□ -0.3
Use1-203ENSMUST00000110054 Prkab2Q6PAM0 271 aa13.18□□□□□ -0.3
Use1-203ENSMUST00000110054 Kank1E9Q238 1360 aa13.18□□□□□ -0.3
Use1-203ENSMUST00000110054 Col4a1P02463 1669 aa13.18□□□□□ -0.3
Use1-203ENSMUST00000110054 Bcl2l13P59017 434 aa13.17□□□□□ -0.3
Use1-203ENSMUST00000110054 Zbtb1Q91VL9 713 aa13.17□□□□□ -0.3
Use1-203ENSMUST00000110054 Pdia6Q922R8 440 aaKnown RBP13.17□□□□□ -0.3
Use1-203ENSMUST00000110054 Gigyf1Q99MR1 1044 aaKnown RBP13.17□□□□□ -0.3
Use1-203ENSMUST00000110054 Rapgef4Q9EQZ6 1011 aa13.17□□□□□ -0.3
Use1-203ENSMUST00000110054 SympkQ80X82 1284 aa13.16□□□□□ -0.3
Use1-203ENSMUST00000110054 Trpc5Q9QX29 975 aa13.16□□□□□ -0.3
Use1-203ENSMUST00000110054 Ccdc171E9Q1U1 1324 aa13.15□□□□□ -0.3
Use1-203ENSMUST00000110054 AtrnQ9WU60 1428 aa13.15□□□□□ -0.3
Use1-203ENSMUST00000110054 HmcesQ8R1M0 353 aaKnown RBP13.15□□□□□ -0.3
Use1-203ENSMUST00000110054 Gm6268A2A3U9 297 aa13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 Cnksr1A2A9K7 700 aa13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 Clcn1Q64347 994 aa13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 Gnl3lQ6PGG6 577 aaKnown RBP13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 Trim52Q8CDV4 233 aa13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 IncenpQ9WU62 880 aa13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 Ankrd31A0A140LI88 1765 aa13.14□□□□□ -0.31
Use1-203ENSMUST00000110054 Zswim8Q3UHH1 1832 aaKnown RBP13.13□□□□□ -0.31
Use1-203ENSMUST00000110054 Ildr2B5TVM2 661 aa13.13□□□□□ -0.31
Use1-203ENSMUST00000110054 Vamp4O70480 141 aa13.13□□□□□ -0.31
Use1-203ENSMUST00000110054 Gpr150Q8BL07 427 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms